EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012368 (Gene tree)
Gene ID: 311329
Gene Symbol: Dnajc17
Alias: LOC311329|RGD1308015
Full Name: DnaJ heat shock protein family (Hsp40) member C17
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 33516 bases
Position: chr3:110980074-111013589
Accession: 1308015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000016692	RRM_1	PF00076.22	9.7e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000016692	-	991	-	ENSRNOP00000016692	303 (aa)	-	D3ZSC8

Gene Model

Click here to download ENSRNOG00000012368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012368	Dnajc17	100	89.474	ENSG00000104129	DNAJC17	98	95.349	Homo_sapiens
ENSRNOG00000012368	Dnajc17	97	68.078	ENSAPOG00000012644	dnajc17	97	68.078	Acanthochromis_polyacanthus
ENSRNOG00000012368	Dnajc17	99	83.007	ENSAMEG00000016923	DNAJC17	100	83.007	Ailuropoda_melanoleuca
ENSRNOG00000012368	Dnajc17	90	67.518	ENSACIG00000014152	dnajc17	85	67.518	Amphilophus_citrinellus
ENSRNOG00000012368	Dnajc17	97	68.078	ENSAOCG00000012011	dnajc17	97	68.078	Amphiprion_ocellaris
ENSRNOG00000012368	Dnajc17	97	68.078	ENSAPEG00000000710	dnajc17	97	68.078	Amphiprion_percula
ENSRNOG00000012368	Dnajc17	90	68.327	ENSATEG00000004347	dnajc17	95	68.327	Anabas_testudineus
ENSRNOG00000012368	Dnajc17	99	75.325	ENSAPLG00000003714	DNAJC17	98	75.325	Anas_platyrhynchos
ENSRNOG00000012368	Dnajc17	99	73.770	ENSACAG00000003311	DNAJC17	98	73.770	Anolis_carolinensis
ENSRNOG00000012368	Dnajc17	100	90.461	ENSANAG00000035937	DNAJC17	100	90.461	Aotus_nancymaae
ENSRNOG00000012368	Dnajc17	99	61.392	ENSACLG00000002917	dnajc17	98	61.076	Astatotilapia_calliptera
ENSRNOG00000012368	Dnajc17	99	70.492	ENSAMXG00000042901	dnajc17	99	70.492	Astyanax_mexicanus
ENSRNOG00000012368	Dnajc17	100	85.197	ENSBTAG00000013480	DNAJC17	100	85.197	Bos_taurus
ENSRNOG00000012368	Dnajc17	80	81.224	ENSCJAG00000013145	-	88	81.633	Callithrix_jacchus
ENSRNOG00000012368	Dnajc17	100	89.145	ENSCJAG00000020803	DNAJC17	100	89.145	Callithrix_jacchus
ENSRNOG00000012368	Dnajc17	100	86.842	ENSCAFG00000009322	DNAJC17	100	86.842	Canis_familiaris
ENSRNOG00000012368	Dnajc17	100	86.842	ENSCAFG00020005728	DNAJC17	100	86.842	Canis_lupus_dingo
ENSRNOG00000012368	Dnajc17	100	86.184	ENSCHIG00000016432	DNAJC17	100	86.184	Capra_hircus
ENSRNOG00000012368	Dnajc17	99	88.449	ENSTSYG00000031602	DNAJC17	99	88.449	Carlito_syrichta
ENSRNOG00000012368	Dnajc17	96	75.342	ENSCPOG00000031431	-	100	75.342	Cavia_porcellus
ENSRNOG00000012368	Dnajc17	100	89.769	ENSCPOG00000014110	-	100	89.769	Cavia_porcellus
ENSRNOG00000012368	Dnajc17	100	88.816	ENSCCAG00000025567	-	100	88.816	Cebus_capucinus
ENSRNOG00000012368	Dnajc17	100	88.487	ENSCATG00000043015	DNAJC17	100	88.487	Cercocebus_atys
ENSRNOG00000012368	Dnajc17	100	91.419	ENSCLAG00000013931	DNAJC17	100	91.419	Chinchilla_lanigera
ENSRNOG00000012368	Dnajc17	100	88.487	ENSCSAG00000007570	DNAJC17	100	88.487	Chlorocebus_sabaeus
ENSRNOG00000012368	Dnajc17	100	86.842	ENSCHOG00000009650	DNAJC17	100	86.842	Choloepus_hoffmanni
ENSRNOG00000012368	Dnajc17	99	75.896	ENSCPBG00000013453	DNAJC17	98	75.896	Chrysemys_picta_bellii
ENSRNOG00000012368	Dnajc17	100	88.487	ENSCANG00000037714	DNAJC17	100	88.487	Colobus_angolensis_palliatus
ENSRNOG00000012368	Dnajc17	100	94.389	ENSCGRG00001017285	Dnajc17	100	94.389	Cricetulus_griseus_chok1gshd
ENSRNOG00000012368	Dnajc17	100	94.389	ENSCGRG00000017089	Dnajc17	100	94.389	Cricetulus_griseus_crigri
ENSRNOG00000012368	Dnajc17	97	66.993	ENSCSEG00000000160	dnajc17	96	66.667	Cynoglossus_semilaevis
ENSRNOG00000012368	Dnajc17	97	66.885	ENSCVAG00000012722	dnajc17	96	66.885	Cyprinodon_variegatus
ENSRNOG00000012368	Dnajc17	99	63.072	ENSDARG00000104959	dnajc17	99	63.072	Danio_rerio
ENSRNOG00000012368	Dnajc17	97	87.797	ENSDNOG00000033742	DNAJC17	100	87.797	Dasypus_novemcinctus
ENSRNOG00000012368	Dnajc17	100	89.769	ENSDORG00000000579	Dnajc17	100	89.769	Dipodomys_ordii
ENSRNOG00000012368	Dnajc17	100	87.500	ENSEASG00005016444	DNAJC17	100	87.500	Equus_asinus_asinus
ENSRNOG00000012368	Dnajc17	100	87.829	ENSECAG00000019839	DNAJC17	100	87.829	Equus_caballus
ENSRNOG00000012368	Dnajc17	98	62.422	ENSELUG00000005126	dnajc17	97	62.422	Esox_lucius
ENSRNOG00000012368	Dnajc17	100	89.474	ENSFCAG00000041783	DNAJC17	100	89.474	Felis_catus
ENSRNOG00000012368	Dnajc17	94	73.379	ENSFALG00000011719	DNAJC17	98	73.377	Ficedula_albicollis
ENSRNOG00000012368	Dnajc17	100	89.769	ENSFDAG00000007247	DNAJC17	99	90.066	Fukomys_damarensis
ENSRNOG00000012368	Dnajc17	97	65.347	ENSFHEG00000008815	dnajc17	96	65.347	Fundulus_heteroclitus
ENSRNOG00000012368	Dnajc17	97	62.583	ENSGMOG00000011377	dnajc17	96	62.583	Gadus_morhua
ENSRNOG00000012368	Dnajc17	99	74.434	ENSGALG00000036432	DNAJC17	98	74.434	Gallus_gallus
ENSRNOG00000012368	Dnajc17	97	67.327	ENSGAFG00000017513	dnajc17	96	67.327	Gambusia_affinis
ENSRNOG00000012368	Dnajc17	98	62.581	ENSGACG00000006184	dnajc17	98	62.581	Gasterosteus_aculeatus
ENSRNOG00000012368	Dnajc17	99	74.593	ENSGAGG00000008259	DNAJC17	98	74.593	Gopherus_agassizii
ENSRNOG00000012368	Dnajc17	100	89.474	ENSGGOG00000000051	DNAJC17	100	89.474	Gorilla_gorilla
ENSRNOG00000012368	Dnajc17	97	67.101	ENSHBUG00000016261	dnajc17	97	67.101	Haplochromis_burtoni
ENSRNOG00000012368	Dnajc17	99	89.073	ENSHGLG00000009889	DNAJC17	99	89.073	Heterocephalus_glaber_female
ENSRNOG00000012368	Dnajc17	99	89.073	ENSHGLG00100011544	DNAJC17	99	89.073	Heterocephalus_glaber_male
ENSRNOG00000012368	Dnajc17	97	62.667	ENSHCOG00000018531	dnajc17	96	62.542	Hippocampus_comes
ENSRNOG00000012368	Dnajc17	96	67.010	ENSIPUG00000019321	dnajc17	99	66.881	Ictalurus_punctatus
ENSRNOG00000012368	Dnajc17	87	90.530	ENSSTOG00000000355	DNAJC17	96	90.530	Ictidomys_tridecemlineatus
ENSRNOG00000012368	Dnajc17	100	89.769	ENSJJAG00000011274	Dnajc17	100	89.769	Jaculus_jaculus
ENSRNOG00000012368	Dnajc17	97	65.147	ENSKMAG00000015647	dnajc17	97	65.147	Kryptolebias_marmoratus
ENSRNOG00000012368	Dnajc17	97	67.647	ENSLBEG00000026224	dnajc17	97	67.320	Labrus_bergylta
ENSRNOG00000012368	Dnajc17	99	70.701	ENSLACG00000016126	DNAJC17	98	70.701	Latimeria_chalumnae
ENSRNOG00000012368	Dnajc17	99	66.032	ENSLOCG00000012721	dnajc17	98	66.032	Lepisosteus_oculatus
ENSRNOG00000012368	Dnajc17	100	88.158	ENSLAFG00000014731	DNAJC17	100	88.158	Loxodonta_africana
ENSRNOG00000012368	Dnajc17	100	88.816	ENSMFAG00000032241	DNAJC17	100	88.816	Macaca_fascicularis
ENSRNOG00000012368	Dnajc17	100	88.816	ENSMMUG00000013160	DNAJC17	100	88.816	Macaca_mulatta
ENSRNOG00000012368	Dnajc17	100	88.816	ENSMNEG00000041956	DNAJC17	100	88.816	Macaca_nemestrina
ENSRNOG00000012368	Dnajc17	100	88.487	ENSMLEG00000017441	DNAJC17	100	88.487	Mandrillus_leucophaeus
ENSRNOG00000012368	Dnajc17	98	69.408	ENSMAMG00000007576	dnajc17	97	69.408	Mastacembelus_armatus
ENSRNOG00000012368	Dnajc17	97	67.427	ENSMZEG00005027011	dnajc17	97	67.427	Maylandia_zebra
ENSRNOG00000012368	Dnajc17	99	73.548	ENSMGAG00000002902	DNAJC17	97	73.548	Meleagris_gallopavo
ENSRNOG00000012368	Dnajc17	100	94.719	ENSMAUG00000020306	Dnajc17	100	94.719	Mesocricetus_auratus
ENSRNOG00000012368	Dnajc17	100	87.500	ENSMICG00000026885	DNAJC17	100	87.500	Microcebus_murinus
ENSRNOG00000012368	Dnajc17	100	93.729	ENSMOCG00000004009	Dnajc17	100	93.729	Microtus_ochrogaster
ENSRNOG00000012368	Dnajc17	99	67.532	ENSMMOG00000002035	dnajc17	98	67.532	Mola_mola
ENSRNOG00000012368	Dnajc17	97	53.898	ENSMALG00000006714	dnajc17	96	54.576	Monopterus_albus
ENSRNOG00000012368	Dnajc17	100	97.030	MGP_CAROLIEiJ_G0024135	Dnajc17	100	97.030	Mus_caroli
ENSRNOG00000012368	Dnajc17	100	96.700	ENSMUSG00000034278	Dnajc17	100	96.700	Mus_musculus
ENSRNOG00000012368	Dnajc17	100	95.380	MGP_PahariEiJ_G0025578	Dnajc17	100	95.380	Mus_pahari
ENSRNOG00000012368	Dnajc17	100	97.030	MGP_SPRETEiJ_G0025051	Dnajc17	100	97.030	Mus_spretus
ENSRNOG00000012368	Dnajc17	100	87.500	ENSMPUG00000008744	DNAJC17	100	87.500	Mustela_putorius_furo
ENSRNOG00000012368	Dnajc17	98	84.564	ENSMLUG00000001084	-	98	81.879	Myotis_lucifugus
ENSRNOG00000012368	Dnajc17	90	84.000	ENSMLUG00000014835	-	98	85.818	Myotis_lucifugus
ENSRNOG00000012368	Dnajc17	100	89.769	ENSNGAG00000003110	Dnajc17	100	89.769	Nannospalax_galili
ENSRNOG00000012368	Dnajc17	97	67.450	ENSNBRG00000001491	dnajc17	96	65.772	Neolamprologus_brichardi
ENSRNOG00000012368	Dnajc17	79	83.402	ENSMEUG00000005641	DNAJC17	99	83.750	Notamacropus_eugenii
ENSRNOG00000012368	Dnajc17	83	69.048	ENSOPRG00000016047	DNAJC17	96	69.048	Ochotona_princeps
ENSRNOG00000012368	Dnajc17	100	89.439	ENSODEG00000017135	-	100	89.439	Octodon_degus
ENSRNOG00000012368	Dnajc17	100	89.109	ENSODEG00000020472	-	100	89.109	Octodon_degus
ENSRNOG00000012368	Dnajc17	97	66.987	ENSONIG00000012139	dnajc17	97	66.987	Oreochromis_niloticus
ENSRNOG00000012368	Dnajc17	100	87.829	ENSOCUG00000005573	DNAJC17	100	85.197	Oryctolagus_cuniculus
ENSRNOG00000012368	Dnajc17	97	68.227	ENSORLG00000016956	dnajc17	84	67.893	Oryzias_latipes
ENSRNOG00000012368	Dnajc17	97	67.893	ENSORLG00020003890	dnajc17	94	66.207	Oryzias_latipes_hni
ENSRNOG00000012368	Dnajc17	97	68.227	ENSORLG00015018594	dnajc17	95	68.231	Oryzias_latipes_hsok
ENSRNOG00000012368	Dnajc17	97	68.977	ENSOMEG00000018656	dnajc17	96	68.977	Oryzias_melastigma
ENSRNOG00000012368	Dnajc17	100	87.171	ENSOGAG00000000528	DNAJC17	100	87.171	Otolemur_garnettii
ENSRNOG00000012368	Dnajc17	100	85.855	ENSOARG00000020273	DNAJC17	100	85.855	Ovis_aries
ENSRNOG00000012368	Dnajc17	100	88.816	ENSPPAG00000041971	DNAJC17	100	88.816	Pan_paniscus
ENSRNOG00000012368	Dnajc17	100	89.474	ENSPPRG00000010738	DNAJC17	100	89.474	Panthera_pardus
ENSRNOG00000012368	Dnajc17	100	88.487	ENSPTIG00000012441	DNAJC17	100	88.487	Panthera_tigris_altaica
ENSRNOG00000012368	Dnajc17	100	88.816	ENSPTRG00000006929	DNAJC17	100	88.816	Pan_troglodytes
ENSRNOG00000012368	Dnajc17	100	82.237	ENSPANG00000019322	DNAJC17	100	82.237	Papio_anubis
ENSRNOG00000012368	Dnajc17	99	77.333	ENSPSIG00000013165	DNAJC17	98	77.333	Pelodiscus_sinensis
ENSRNOG00000012368	Dnajc17	98	67.230	ENSPMGG00000011399	dnajc17	97	67.230	Periophthalmus_magnuspinnatus
ENSRNOG00000012368	Dnajc17	80	61.224	ENSPMAG00000004444	dnajc17	98	60.079	Petromyzon_marinus
ENSRNOG00000012368	Dnajc17	97	67.213	ENSPFOG00000010717	dnajc17	97	66.129	Poecilia_formosa
ENSRNOG00000012368	Dnajc17	97	67.213	ENSPLAG00000008436	dnajc17	96	67.213	Poecilia_latipinna
ENSRNOG00000012368	Dnajc17	97	68.121	ENSPMEG00000008136	dnajc17	97	68.121	Poecilia_mexicana
ENSRNOG00000012368	Dnajc17	97	66.885	ENSPREG00000020755	dnajc17	97	66.885	Poecilia_reticulata
ENSRNOG00000012368	Dnajc17	100	87.829	ENSPPYG00000006360	DNAJC17	100	87.829	Pongo_abelii
ENSRNOG00000012368	Dnajc17	99	59.272	ENSPCAG00000000374	DNAJC17	99	59.272	Procavia_capensis
ENSRNOG00000012368	Dnajc17	100	87.829	ENSPCOG00000016152	DNAJC17	100	87.829	Propithecus_coquereli
ENSRNOG00000012368	Dnajc17	100	87.829	ENSPVAG00000001843	DNAJC17	100	87.829	Pteropus_vampyrus
ENSRNOG00000012368	Dnajc17	99	67.752	ENSPNYG00000000618	dnajc17	98	67.752	Pundamilia_nyererei
ENSRNOG00000012368	Dnajc17	99	65.017	ENSPNAG00000020547	dnajc17	98	65.017	Pygocentrus_nattereri
ENSRNOG00000012368	Dnajc17	100	88.816	ENSRBIG00000034194	DNAJC17	100	88.816	Rhinopithecus_bieti
ENSRNOG00000012368	Dnajc17	100	88.816	ENSRROG00000030973	DNAJC17	100	88.816	Rhinopithecus_roxellana
ENSRNOG00000012368	Dnajc17	100	80.592	ENSSBOG00000032474	-	100	80.592	Saimiri_boliviensis_boliviensis
ENSRNOG00000012368	Dnajc17	96	67.320	ENSSFOG00015016491	dnajc17	97	67.197	Scleropages_formosus
ENSRNOG00000012368	Dnajc17	97	66.558	ENSSMAG00000006544	dnajc17	97	66.234	Scophthalmus_maximus
ENSRNOG00000012368	Dnajc17	97	69.481	ENSSDUG00000009889	dnajc17	97	69.481	Seriola_dumerili
ENSRNOG00000012368	Dnajc17	97	68.506	ENSSLDG00000004295	dnajc17	97	68.506	Seriola_lalandi_dorsalis
ENSRNOG00000012368	Dnajc17	85	75.188	ENSSPUG00000001286	DNAJC17	96	75.188	Sphenodon_punctatus
ENSRNOG00000012368	Dnajc17	95	64.548	ENSSPAG00000020028	dnajc17	98	64.548	Stegastes_partitus
ENSRNOG00000012368	Dnajc17	87	87.121	ENSSSCG00000004762	DNAJC17	88	87.121	Sus_scrofa
ENSRNOG00000012368	Dnajc17	99	73.616	ENSTGUG00000006661	DNAJC17	98	73.616	Taeniopygia_guttata
ENSRNOG00000012368	Dnajc17	97	61.667	ENSTRUG00000013840	dnajc17	97	61.333	Takifugu_rubripes
ENSRNOG00000012368	Dnajc17	99	65.705	ENSTNIG00000017455	dnajc17	98	65.705	Tetraodon_nigroviridis
ENSRNOG00000012368	Dnajc17	77	89.796	ENSTBEG00000014488	DNAJC17	76	89.796	Tupaia_belangeri
ENSRNOG00000012368	Dnajc17	100	85.948	ENSTTRG00000011417	DNAJC17	100	83.987	Tursiops_truncatus
ENSRNOG00000012368	Dnajc17	100	88.487	ENSUAMG00000016573	DNAJC17	100	88.487	Ursus_americanus
ENSRNOG00000012368	Dnajc17	100	87.500	ENSUMAG00000012443	DNAJC17	100	87.500	Ursus_maritimus
ENSRNOG00000012368	Dnajc17	100	87.829	ENSVVUG00000026624	DNAJC17	100	87.829	Vulpes_vulpes
ENSRNOG00000012368	Dnajc17	97	66.667	ENSXCOG00000011198	dnajc17	96	66.667	Xiphophorus_couchianus
ENSRNOG00000012368	Dnajc17	97	66.557	ENSXMAG00000006791	dnajc17	96	66.557	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	20160132.	IDA	Component
GO:0005737	cytoplasm	20160132.	IDA	Component
GO:1901998	toxin transport	-	IEA	Process
GO:1901998	toxin transport	-	ISO	Process