EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000012406 (Gene tree)
Gene ID
363133
Gene Symbol
Pcbp4
Alias
LOC363133
Full Name
poly(rC) binding protein 4
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
10237 bases
Position
chr8:115155470-115165706
Accession
1307910
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000017139KH_1PF00013.291.9e-5013
ENSRNOP00000017139KH_1PF00013.291.9e-5023
ENSRNOP00000017139KH_1PF00013.291.9e-5033
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000017139-2022XM_006243802ENSRNOP00000017139403 (aa)XP_006243864D3ZCS3
Gene Model
Click here to download ENSRNOG00000012406's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012406's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000012406Pcbp47559.317ENSRNOG00000036852Pcbp29659.317
ENSRNOG00000012406Pcbp47332.558ENSRNOG00000047628Khsrp5634.091
ENSRNOG00000012406Pcbp47331.111ENSRNOG00000025946Igf2bp26231.111
ENSRNOG00000012406Pcbp45648.276ENSRNOG00000019113Hnrnpk5744.444
ENSRNOG00000012406Pcbp47332.800ENSRNOG00000006122Igf2bp15930.597
ENSRNOG00000012406Pcbp47364.333ENSRNOG00000001245Pcbp39464.333
ENSRNOG00000012406Pcbp47434.524ENSRNOG00000043370Fubp15934.524
ENSRNOG00000012406Pcbp46138.462ENSRNOG00000031440Nova17138.462
ENSRNOG00000012406Pcbp45646.552ENSRNOG00000013579LOC1003599165442.857
ENSRNOG00000012406Pcbp47750.305ENSRNOG00000006713AC099137.19451.282
ENSRNOG00000012406Pcbp48436.000ENSRNOG00000009139Fubp37036.000
ENSRNOG00000012406Pcbp47641.538ENSRNOG00000013847Nova25541.538
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000012406Pcbp410097.767ENSG00000090097PCBP410098.214Homo_sapiens
ENSRNOG00000012406Pcbp49758.998ENSAPOG00000009897-9558.124Acanthochromis_polyacanthus
ENSRNOG00000012406Pcbp410098.263ENSAMEG00000009211PCBP410098.263Ailuropoda_melanoleuca
ENSRNOG00000012406Pcbp48954.245ENSACIG00000015264pcbp48953.302Amphilophus_citrinellus
ENSRNOG00000012406Pcbp49157.794ENSACIG00000020434-10056.867Amphilophus_citrinellus
ENSRNOG00000012406Pcbp49659.773ENSAOCG00000006924-9956.941Amphiprion_ocellaris
ENSRNOG00000012406Pcbp49754.897ENSAOCG00000021366-9754.005Amphiprion_ocellaris
ENSRNOG00000012406Pcbp49660.000ENSAPEG00000023157pcbp410057.183Amphiprion_percula
ENSRNOG00000012406Pcbp48948.086ENSAPEG00000009555-8847.356Amphiprion_percula
ENSRNOG00000012406Pcbp48955.416ENSATEG00000008529pcbp49354.847Anabas_testudineus
ENSRNOG00000012406Pcbp49754.875ENSATEG00000006511-9754.195Anabas_testudineus
ENSRNOG00000012406Pcbp410080.288ENSACAG00000011701PCBP410079.808Anolis_carolinensis
ENSRNOG00000012406Pcbp410098.015ENSANAG00000023072PCBP410098.015Aotus_nancymaae
ENSRNOG00000012406Pcbp49758.581ENSACLG00000025246-9558.352Astatotilapia_calliptera
ENSRNOG00000012406Pcbp49755.202ENSACLG00000013348pcbp49453.503Astatotilapia_calliptera
ENSRNOG00000012406Pcbp49758.969ENSAMXG00000033125pcbp49558.296Astyanax_mexicanus
ENSRNOG00000012406Pcbp410098.263ENSBTAG00000018622PCBP410098.263Bos_taurus
ENSRNOG00000012406Pcbp410098.015ENSCJAG00000005783PCBP410098.015Callithrix_jacchus
ENSRNOG00000012406Pcbp410098.263ENSCAFG00000010019PCBP410098.263Canis_familiaris
ENSRNOG00000012406Pcbp410098.263ENSCAFG00020022361PCBP410098.263Canis_lupus_dingo
ENSRNOG00000012406Pcbp410098.511ENSCHIG00000012918PCBP410098.511Capra_hircus
ENSRNOG00000012406Pcbp410099.007ENSTSYG00000008765PCBP410099.007Carlito_syrichta
ENSRNOG00000012406Pcbp410098.263ENSCAPG00000005895PCBP410098.263Cavia_aperea
ENSRNOG00000012406Pcbp410099.007ENSCPOG00000014617PCBP410099.007Cavia_porcellus
ENSRNOG00000012406Pcbp410098.263ENSCCAG00000033268PCBP410098.263Cebus_capucinus
ENSRNOG00000012406Pcbp410098.263ENSCATG00000032034PCBP410098.263Cercocebus_atys
ENSRNOG00000012406Pcbp410099.007ENSCLAG00000008356PCBP410099.007Chinchilla_lanigera
ENSRNOG00000012406Pcbp410098.263ENSCSAG00000013913PCBP410098.263Chlorocebus_sabaeus
ENSRNOG00000012406Pcbp410080.769ENSCPBG00000016554PCBP49780.288Chrysemys_picta_bellii
ENSRNOG00000012406Pcbp410098.263ENSCANG00000038865PCBP410098.263Colobus_angolensis_palliatus
ENSRNOG00000012406Pcbp410099.504ENSCGRG00001014953Pcbp410099.504Cricetulus_griseus_chok1gshd
ENSRNOG00000012406Pcbp410099.504ENSCGRG00000008617Pcbp410099.504Cricetulus_griseus_crigri
ENSRNOG00000012406Pcbp49753.636ENSCSEG00000021041PCBP49752.620Cynoglossus_semilaevis
ENSRNOG00000012406Pcbp49653.004ENSCSEG00000014487pcbp49352.361Cynoglossus_semilaevis
ENSRNOG00000012406Pcbp49758.770ENSCVAG00000013090-9558.124Cyprinodon_variegatus
ENSRNOG00000012406Pcbp49660.282ENSCVAG00000003674pcbp49859.718Cyprinodon_variegatus
ENSRNOG00000012406Pcbp49757.978ENSDARG00000024276pcbp49963.354Danio_rerio
ENSRNOG00000012406Pcbp49698.824ENSDNOG00000033951PCBP49098.824Dasypus_novemcinctus
ENSRNOG00000012406Pcbp410098.015ENSDORG00000000573Pcbp410098.015Dipodomys_ordii
ENSRNOG00000012406Pcbp46589.789ENSETEG00000001778PCBP49689.789Echinops_telfairi
ENSRNOG00000012406Pcbp410097.767ENSEASG00005012889PCBP410097.767Equus_asinus_asinus
ENSRNOG00000012406Pcbp410097.767ENSECAG00000024218PCBP410097.767Equus_caballus
ENSRNOG00000012406Pcbp410056.438ENSELUG00000018204pcbp49956.867Esox_lucius
ENSRNOG00000012406Pcbp49757.271ENSELUG00000001870-9556.629Esox_lucius
ENSRNOG00000012406Pcbp410098.511ENSFCAG00000009148PCBP410098.511Felis_catus
ENSRNOG00000012406Pcbp49877.833ENSFALG00000008831PCBP49180.106Ficedula_albicollis
ENSRNOG00000012406Pcbp410098.759ENSFDAG00000012692PCBP410098.759Fukomys_damarensis
ENSRNOG00000012406Pcbp48949.340ENSFHEG00000002769-9748.285Fundulus_heteroclitus
ENSRNOG00000012406Pcbp49858.108ENSGMOG00000017799-9857.240Gadus_morhua
ENSRNOG00000012406Pcbp49877.641ENSGALG00000027695PCBP410076.259Gallus_gallus
ENSRNOG00000012406Pcbp48460.656ENSGAFG00000021090-7860.383Gambusia_affinis
ENSRNOG00000012406Pcbp410060.140ENSGACG00000002664-10059.674Gasterosteus_aculeatus
ENSRNOG00000012406Pcbp410080.288ENSGAGG00000022116PCBP49779.808Gopherus_agassizii
ENSRNOG00000012406Pcbp410097.519ENSGGOG00000012474PCBP410097.519Gorilla_gorilla
ENSRNOG00000012406Pcbp49759.226ENSHBUG00000005329-9558.352Haplochromis_burtoni
ENSRNOG00000012406Pcbp49757.942ENSHBUG00000009472pcbp49356.152Haplochromis_burtoni
ENSRNOG00000012406Pcbp410099.504ENSHGLG00000012018PCBP410099.504Heterocephalus_glaber_female
ENSRNOG00000012406Pcbp410097.291ENSHGLG00100008748PCBP410097.291Heterocephalus_glaber_male
ENSRNOG00000012406Pcbp49758.738ENSHCOG00000010838-10055.138Hippocampus_comes
ENSRNOG00000012406Pcbp49762.740ENSIPUG00000008212pcbp49562.740Ictalurus_punctatus
ENSRNOG00000012406Pcbp410097.022ENSSTOG00000002573PCBP410097.022Ictidomys_tridecemlineatus
ENSRNOG00000012406Pcbp410099.504ENSJJAG00000016235Pcbp410099.504Jaculus_jaculus
ENSRNOG00000012406Pcbp49758.124ENSKMAG00000017554-9660.067Kryptolebias_marmoratus
ENSRNOG00000012406Pcbp49660.055ENSKMAG00000014252pcbp49760.055Kryptolebias_marmoratus
ENSRNOG00000012406Pcbp49759.039ENSLBEG00000011345-9558.581Labrus_bergylta
ENSRNOG00000012406Pcbp410067.067ENSLACG00000015899PCBP49477.500Latimeria_chalumnae
ENSRNOG00000012406Pcbp49759.217ENSLOCG00000013402pcbp49560.046Lepisosteus_oculatus
ENSRNOG00000012406Pcbp49698.603ENSLAFG00000010732PCBP410098.603Loxodonta_africana
ENSRNOG00000012406Pcbp410098.263ENSMFAG00000001431PCBP410098.263Macaca_fascicularis
ENSRNOG00000012406Pcbp410098.263ENSMMUG00000022205PCBP410098.263Macaca_mulatta
ENSRNOG00000012406Pcbp410098.263ENSMNEG00000028553PCBP410098.263Macaca_nemestrina
ENSRNOG00000012406Pcbp410098.263ENSMLEG00000027083PCBP410098.263Mandrillus_leucophaeus
ENSRNOG00000012406Pcbp49857.718ENSMAMG00000010163pcbp49356.823Mastacembelus_armatus
ENSRNOG00000012406Pcbp49759.226ENSMAMG00000011364-9558.352Mastacembelus_armatus
ENSRNOG00000012406Pcbp49758.581ENSMZEG00005023631-9558.352Maylandia_zebra
ENSRNOG00000012406Pcbp49757.942ENSMZEG00005008852pcbp49356.152Maylandia_zebra
ENSRNOG00000012406Pcbp46867.647ENSMGAG00000003895-9966.667Meleagris_gallopavo
ENSRNOG00000012406Pcbp45285.096ENSMGAG00000005091-9585.096Meleagris_gallopavo
ENSRNOG00000012406Pcbp410099.007ENSMAUG00000021064Pcbp410099.007Mesocricetus_auratus
ENSRNOG00000012406Pcbp410099.007ENSMICG00000002686PCBP410099.007Microcebus_murinus
ENSRNOG00000012406Pcbp410099.256ENSMOCG00000013557Pcbp410099.256Microtus_ochrogaster
ENSRNOG00000012406Pcbp47254.426ENSMMOG00000017756pcbp49754.754Mola_mola
ENSRNOG00000012406Pcbp49755.149ENSMMOG00000020533-9854.691Mola_mola
ENSRNOG00000012406Pcbp410091.463ENSMODG00000011790PCBP48591.463Monodelphis_domestica
ENSRNOG00000012406Pcbp48756.030ENSMALG00000022117-9955.051Monopterus_albus
ENSRNOG00000012406Pcbp49063.472ENSMALG00000020318pcbp48463.325Monopterus_albus
ENSRNOG00000012406Pcbp410099.752MGP_CAROLIEiJ_G0032623Pcbp410099.752Mus_caroli
ENSRNOG00000012406Pcbp410099.752ENSMUSG00000023495Pcbp410099.752Mus_musculus
ENSRNOG00000012406Pcbp4100100.000MGP_PahariEiJ_G0015491Pcbp4100100.000Mus_pahari
ENSRNOG00000012406Pcbp410099.752MGP_SPRETEiJ_G0033768-10099.752Mus_spretus
ENSRNOG00000012406Pcbp410098.511ENSMPUG00000011766PCBP410098.511Mustela_putorius_furo
ENSRNOG00000012406Pcbp410099.752ENSNGAG00000013148Pcbp410099.752Nannospalax_galili
ENSRNOG00000012406Pcbp49754.920ENSNBRG00000015885-9754.462Neolamprologus_brichardi
ENSRNOG00000012406Pcbp49548.984ENSNBRG00000007475pcbp49848.533Neolamprologus_brichardi
ENSRNOG00000012406Pcbp410098.263ENSNLEG00000007064PCBP410098.263Nomascus_leucogenys
ENSRNOG00000012406Pcbp48978.109ENSMEUG00000006917PCBP49578.856Notamacropus_eugenii
ENSRNOG00000012406Pcbp48988.889ENSOPRG00000008763PCBP49888.889Ochotona_princeps
ENSRNOG00000012406Pcbp410099.007ENSODEG00000018230PCBP410099.007Octodon_degus
ENSRNOG00000012406Pcbp410087.531ENSOANG00000014110PCBP49787.531Ornithorhynchus_anatinus
ENSRNOG00000012406Pcbp410098.263ENSOCUG00000025336PCBP410098.263Oryctolagus_cuniculus
ENSRNOG00000012406Pcbp49753.579ENSORLG00000003061pcbp49453.247Oryzias_latipes
ENSRNOG00000012406Pcbp49755.079ENSORLG00000009899-9854.195Oryzias_latipes
ENSRNOG00000012406Pcbp49758.998ENSORLG00020001183-9558.124Oryzias_latipes_hni
ENSRNOG00000012406Pcbp49758.770ENSORLG00015017819-9557.895Oryzias_latipes_hsok
ENSRNOG00000012406Pcbp49753.433ENSORLG00015019262pcbp49453.433Oryzias_latipes_hsok
ENSRNOG00000012406Pcbp49756.813ENSOMEG00000003516-9356.351Oryzias_melastigma
ENSRNOG00000012406Pcbp49758.542ENSOMEG00000011545-9558.124Oryzias_melastigma
ENSRNOG00000012406Pcbp410098.759ENSOGAG00000032384PCBP410098.759Otolemur_garnettii
ENSRNOG00000012406Pcbp49698.361ENSOARG00000006603PCBP410098.361Ovis_aries
ENSRNOG00000012406Pcbp410097.519ENSPPAG00000038764PCBP410097.519Pan_paniscus
ENSRNOG00000012406Pcbp410098.511ENSPPRG00000006165PCBP410098.511Panthera_pardus
ENSRNOG00000012406Pcbp49998.750ENSPTIG00000005401PCBP49598.750Panthera_tigris_altaica
ENSRNOG00000012406Pcbp410097.767ENSPTRG00000014983PCBP410097.767Pan_troglodytes
ENSRNOG00000012406Pcbp410098.263ENSPANG00000026222PCBP410098.263Papio_anubis
ENSRNOG00000012406Pcbp49959.819ENSPKIG00000005487-9758.824Paramormyrops_kingsleyae
ENSRNOG00000012406Pcbp49758.257ENSPKIG00000010244pcbp410054.128Paramormyrops_kingsleyae
ENSRNOG00000012406Pcbp48471.884ENSPSIG00000011286PCBP49771.633Pelodiscus_sinensis
ENSRNOG00000012406Pcbp49255.024ENSPMGG00000000063pcbp49952.871Periophthalmus_magnuspinnatus
ENSRNOG00000012406Pcbp49754.358ENSPMGG00000022732-9854.273Periophthalmus_magnuspinnatus
ENSRNOG00000012406Pcbp410099.752ENSPEMG00000009276Pcbp410099.752Peromyscus_maniculatus_bairdii
ENSRNOG00000012406Pcbp410091.707ENSPCIG00000018151PCBP49691.707Phascolarctos_cinereus
ENSRNOG00000012406Pcbp49758.581ENSPFOG00000002989-9558.124Poecilia_formosa
ENSRNOG00000012406Pcbp49755.809ENSPFOG00000014474pcbp49859.940Poecilia_formosa
ENSRNOG00000012406Pcbp47952.507ENSPLAG00000023316pcbp48951.436Poecilia_latipinna
ENSRNOG00000012406Pcbp49047.294ENSPLAG00000011438-9847.059Poecilia_latipinna
ENSRNOG00000012406Pcbp48141.554ENSPMEG00000012990pcbp410040.541Poecilia_mexicana
ENSRNOG00000012406Pcbp49752.064ENSPREG00000017370-9751.606Poecilia_reticulata
ENSRNOG00000012406Pcbp46752.963ENSPREG00000021498-8252.963Poecilia_reticulata
ENSRNOG00000012406Pcbp410098.015ENSPPYG00000013822PCBP410098.015Pongo_abelii
ENSRNOG00000012406Pcbp48991.003ENSPCAG00000009515PCBP49791.003Procavia_capensis
ENSRNOG00000012406Pcbp410099.007ENSPCOG00000027535PCBP410099.007Propithecus_coquereli
ENSRNOG00000012406Pcbp48985.330ENSPVAG00000012474PCBP49785.330Pteropus_vampyrus
ENSRNOG00000012406Pcbp49755.125ENSPNYG00000003098-9754.233Pundamilia_nyererei
ENSRNOG00000012406Pcbp49352.477ENSPNYG00000019234pcbp410051.802Pundamilia_nyererei
ENSRNOG00000012406Pcbp49758.427ENSPNAG00000025434pcbp49557.753Pygocentrus_nattereri
ENSRNOG00000012406Pcbp410098.263ENSRBIG00000043793PCBP410098.263Rhinopithecus_bieti
ENSRNOG00000012406Pcbp410098.263ENSRROG00000034589PCBP410098.263Rhinopithecus_roxellana
ENSRNOG00000012406Pcbp410098.263ENSSBOG00000027029PCBP410098.263Saimiri_boliviensis_boliviensis
ENSRNOG00000012406Pcbp49093.133ENSSHAG00000007362PCBP410093.133Sarcophilus_harrisii
ENSRNOG00000012406Pcbp47153.799ENSSFOG00015008221pcbp46353.823Scleropages_formosus
ENSRNOG00000012406Pcbp49759.722ENSSFOG00015012075PCBP49959.397Scleropages_formosus
ENSRNOG00000012406Pcbp49657.772ENSSMAG00000005827pcbp49057.254Scophthalmus_maximus
ENSRNOG00000012406Pcbp49758.124ENSSMAG00000009392-9457.437Scophthalmus_maximus
ENSRNOG00000012406Pcbp49054.916ENSSDUG00000017719pcbp49753.237Seriola_dumerili
ENSRNOG00000012406Pcbp49755.125ENSSDUG00000015540-9754.462Seriola_dumerili
ENSRNOG00000012406Pcbp49755.125ENSSLDG00000007851-9754.462Seriola_lalandi_dorsalis
ENSRNOG00000012406Pcbp410074.038ENSSPUG00000000194PCBP410073.558Sphenodon_punctatus
ENSRNOG00000012406Pcbp49758.810ENSSPAG00000003033-9558.581Stegastes_partitus
ENSRNOG00000012406Pcbp48051.337ENSSPAG00000019058-9248.663Stegastes_partitus
ENSRNOG00000012406Pcbp410098.015ENSSSCG00000028446PCBP410098.015Sus_scrofa
ENSRNOG00000012406Pcbp47470.779ENSTGUG00000006393PCBP49970.323Taeniopygia_guttata
ENSRNOG00000012406Pcbp49754.670ENSTRUG00000007426-9754.005Takifugu_rubripes
ENSRNOG00000012406Pcbp49762.808ENSTNIG00000017887-9762.562Tetraodon_nigroviridis
ENSRNOG00000012406Pcbp47970.752ENSTBEG00000015770PCBP410070.752Tupaia_belangeri
ENSRNOG00000012406Pcbp47498.235ENSTTRG00000001443PCBP48398.235Tursiops_truncatus
ENSRNOG00000012406Pcbp49698.160ENSUAMG00000020871PCBP410098.160Ursus_americanus
ENSRNOG00000012406Pcbp49597.638ENSUMAG00000021609PCBP49497.638Ursus_maritimus
ENSRNOG00000012406Pcbp410098.263ENSVVUG00000026857PCBP410098.263Vulpes_vulpes
ENSRNOG00000012406Pcbp49655.394ENSXCOG00000000111-9955.102Xiphophorus_couchianus
ENSRNOG00000012406Pcbp47964.080ENSXMAG00000015709pcbp47663.361Xiphophorus_maculatus
ENSRNOG00000012406Pcbp49758.314ENSXMAG00000024530-9557.859Xiphophorus_maculatus
ENSRNOG00000012406Pcbp48449.261ENSXMAG00000022188-9048.030Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003730mRNA 3'-UTR binding-IEAFunction
GO:0003730mRNA 3'-UTR binding-ISOFunction
GO:0005829cytosol-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0043488regulation of mRNA stability-IEAProcess
GO:0043488regulation of mRNA stability-ISOProcess
GO:0048025negative regulation of mRNA splicing, via spliceosome-ISOProcess
GO:1902163negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator-ISOProcess

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