EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012470 (Gene tree)
Gene ID: 315658
Gene Symbol: Zc3h12c
Alias: LOC315658|RGD1565078
Full Name: zinc finger CCCH type containing 12C
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 55161 bases
Position: chr8:56641808-56696968
Accession: 1565078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000016638	RNase_Zc3h12a	PF11977.8	3.4e-65	1	1
ENSRNOP00000071249	RNase_Zc3h12a	PF11977.8	3.5e-65	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000016637	-	2709	-	ENSRNOP00000016638	884 (aa)	-	D3ZSI6
ENSRNOT00000080043	-	2933	XM_006243073	ENSRNOP00000071249	903 (aa)	XP_006243135	A0A0G2K000

Gene Model

Click here to download ENSRNOG00000012470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000012470	Zc3h12c	93	52.398	ENSRNOG00000011508	Zc3h12b	99	60.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012470	Zc3h12c	99	92.474	ENSG00000149289	ZC3H12C	100	92.606	Homo_sapiens
ENSRNOG00000012470	Zc3h12c	99	92.123	ENSAMEG00000009188	ZC3H12C	99	92.123	Ailuropoda_melanoleuca
ENSRNOG00000012470	Zc3h12c	71	88.640	ENSAPLG00000002854	ZC3H12C	100	88.640	Anas_platyrhynchos
ENSRNOG00000012470	Zc3h12c	99	82.712	ENSACAG00000001031	ZC3H12C	98	82.712	Anolis_carolinensis
ENSRNOG00000012470	Zc3h12c	99	92.930	ENSANAG00000026999	ZC3H12C	99	92.930	Aotus_nancymaae
ENSRNOG00000012470	Zc3h12c	100	91.186	ENSBTAG00000008732	ZC3H12C	100	91.186	Bos_taurus
ENSRNOG00000012470	Zc3h12c	99	92.474	ENSCJAG00000010319	ZC3H12C	99	92.474	Callithrix_jacchus
ENSRNOG00000012470	Zc3h12c	99	88.369	ENSCAFG00000014297	ZC3H12C	99	88.369	Canis_familiaris
ENSRNOG00000012470	Zc3h12c	99	88.369	ENSCAFG00020006999	ZC3H12C	99	88.068	Canis_lupus_dingo
ENSRNOG00000012470	Zc3h12c	100	91.186	ENSCHIG00000021221	ZC3H12C	100	91.186	Capra_hircus
ENSRNOG00000012470	Zc3h12c	91	91.271	ENSTSYG00000005412	ZC3H12C	99	91.411	Carlito_syrichta
ENSRNOG00000012470	Zc3h12c	99	89.636	ENSCAPG00000011610	ZC3H12C	99	89.840	Cavia_aperea
ENSRNOG00000012470	Zc3h12c	99	89.726	ENSCPOG00000032962	ZC3H12C	99	89.726	Cavia_porcellus
ENSRNOG00000012470	Zc3h12c	100	92.760	ENSCCAG00000022395	ZC3H12C	100	92.958	Cebus_capucinus
ENSRNOG00000012470	Zc3h12c	100	92.308	ENSCATG00000041641	ZC3H12C	100	92.308	Cercocebus_atys
ENSRNOG00000012470	Zc3h12c	99	92.922	ENSCLAG00000012577	ZC3H12C	100	93.075	Chinchilla_lanigera
ENSRNOG00000012470	Zc3h12c	100	91.855	ENSCSAG00000002945	ZC3H12C	100	91.855	Chlorocebus_sabaeus
ENSRNOG00000012470	Zc3h12c	99	85.438	ENSCHOG00000013202	-	100	85.520	Choloepus_hoffmanni
ENSRNOG00000012470	Zc3h12c	99	84.371	ENSCPBG00000021043	ZC3H12C	100	84.930	Chrysemys_picta_bellii
ENSRNOG00000012470	Zc3h12c	99	92.237	ENSCANG00000040994	ZC3H12C	99	92.237	Colobus_angolensis_palliatus
ENSRNOG00000012470	Zc3h12c	100	96.267	ENSCGRG00001013672	Zc3h12c	100	96.267	Cricetulus_griseus_chok1gshd
ENSRNOG00000012470	Zc3h12c	99	96.233	ENSCGRG00000001308	Zc3h12c	100	96.231	Cricetulus_griseus_crigri
ENSRNOG00000012470	Zc3h12c	99	90.205	ENSDNOG00000013040	ZC3H12C	99	90.205	Dasypus_novemcinctus
ENSRNOG00000012470	Zc3h12c	99	90.868	ENSDORG00000009134	Zc3h12c	99	90.868	Dipodomys_ordii
ENSRNOG00000012470	Zc3h12c	71	94.560	ENSETEG00000008027	ZC3H12C	100	94.560	Echinops_telfairi
ENSRNOG00000012470	Zc3h12c	100	92.534	ENSEASG00005010098	ZC3H12C	100	92.534	Equus_asinus_asinus
ENSRNOG00000012470	Zc3h12c	99	92.474	ENSECAG00000000462	ZC3H12C	100	92.606	Equus_caballus
ENSRNOG00000012470	Zc3h12c	64	90.526	ENSEEUG00000005709	-	99	90.526	Erinaceus_europaeus
ENSRNOG00000012470	Zc3h12c	99	90.536	ENSFCAG00000010665	ZC3H12C	99	90.536	Felis_catus
ENSRNOG00000012470	Zc3h12c	99	83.860	ENSFALG00000008776	ZC3H12C	99	83.918	Ficedula_albicollis
ENSRNOG00000012470	Zc3h12c	99	93.265	ENSFDAG00000017997	ZC3H12C	100	93.779	Fukomys_damarensis
ENSRNOG00000012470	Zc3h12c	96	84.014	ENSGALG00000017154	ZC3H12C	100	84.014	Gallus_gallus
ENSRNOG00000012470	Zc3h12c	95	83.095	ENSGAGG00000024154	ZC3H12C	86	83.473	Gopherus_agassizii
ENSRNOG00000012470	Zc3h12c	99	92.360	ENSGGOG00000010117	ZC3H12C	99	92.360	Gorilla_gorilla
ENSRNOG00000012470	Zc3h12c	100	92.760	ENSHGLG00000019021	ZC3H12C	100	92.760	Heterocephalus_glaber_female
ENSRNOG00000012470	Zc3h12c	100	92.760	ENSHGLG00100007295	ZC3H12C	100	92.760	Heterocephalus_glaber_male
ENSRNOG00000012470	Zc3h12c	100	94.574	ENSSTOG00000022143	ZC3H12C	100	95.320	Ictidomys_tridecemlineatus
ENSRNOG00000012470	Zc3h12c	99	94.635	ENSJJAG00000001147	Zc3h12c	100	94.635	Jaculus_jaculus
ENSRNOG00000012470	Zc3h12c	99	73.513	ENSLACG00000009305	ZC3H12C	99	73.513	Latimeria_chalumnae
ENSRNOG00000012470	Zc3h12c	71	94.896	ENSLAFG00000016296	ZC3H12C	100	94.896	Loxodonta_africana
ENSRNOG00000012470	Zc3h12c	100	92.308	ENSMFAG00000042068	ZC3H12C	100	92.308	Macaca_fascicularis
ENSRNOG00000012470	Zc3h12c	99	92.474	ENSMMUG00000048435	ZC3H12C	99	92.474	Macaca_mulatta
ENSRNOG00000012470	Zc3h12c	100	92.308	ENSMNEG00000032663	ZC3H12C	100	92.606	Macaca_nemestrina
ENSRNOG00000012470	Zc3h12c	99	92.360	ENSMLEG00000032083	ZC3H12C	99	92.360	Mandrillus_leucophaeus
ENSRNOG00000012470	Zc3h12c	99	82.786	ENSMGAG00000015143	ZC3H12C	99	82.880	Meleagris_gallopavo
ENSRNOG00000012470	Zc3h12c	100	95.575	ENSMAUG00000020412	Zc3h12c	100	95.575	Mesocricetus_auratus
ENSRNOG00000012470	Zc3h12c	100	93.665	ENSMICG00000011455	ZC3H12C	100	94.131	Microcebus_murinus
ENSRNOG00000012470	Zc3h12c	100	96.235	ENSMOCG00000020090	Zc3h12c	100	96.235	Microtus_ochrogaster
ENSRNOG00000012470	Zc3h12c	96	88.435	ENSMODG00000014555	ZC3H12C	100	88.435	Monodelphis_domestica
ENSRNOG00000012470	Zc3h12c	100	96.346	MGP_CAROLIEiJ_G0032210	Zc3h12c	100	96.346	Mus_caroli
ENSRNOG00000012470	Zc3h12c	100	96.678	ENSMUSG00000035164	Zc3h12c	100	96.678	Mus_musculus
ENSRNOG00000012470	Zc3h12c	100	95.814	MGP_PahariEiJ_G0015078	Zc3h12c	100	95.814	Mus_pahari
ENSRNOG00000012470	Zc3h12c	100	96.678	MGP_SPRETEiJ_G0033350	Zc3h12c	100	96.678	Mus_spretus
ENSRNOG00000012470	Zc3h12c	100	85.936	ENSMPUG00000005888	ZC3H12C	100	85.936	Mustela_putorius_furo
ENSRNOG00000012470	Zc3h12c	99	91.781	ENSMLUG00000017189	ZC3H12C	100	91.781	Myotis_lucifugus
ENSRNOG00000012470	Zc3h12c	100	94.131	ENSNGAG00000023957	Zc3h12c	100	94.131	Nannospalax_galili
ENSRNOG00000012470	Zc3h12c	99	92.702	ENSNLEG00000029829	ZC3H12C	99	92.702	Nomascus_leucogenys
ENSRNOG00000012470	Zc3h12c	99	84.642	ENSMEUG00000015398	ZC3H12C	100	84.642	Notamacropus_eugenii
ENSRNOG00000012470	Zc3h12c	71	82.884	ENSOPRG00000003370	-	96	82.884	Ochotona_princeps
ENSRNOG00000012470	Zc3h12c	99	89.522	ENSODEG00000011026	ZC3H12C	100	89.522	Octodon_degus
ENSRNOG00000012470	Zc3h12c	71	83.861	ENSOANG00000006242	-	99	83.861	Ornithorhynchus_anatinus
ENSRNOG00000012470	Zc3h12c	99	93.615	ENSOCUG00000005283	ZC3H12C	99	93.615	Oryctolagus_cuniculus
ENSRNOG00000012470	Zc3h12c	99	92.360	ENSOGAG00000013223	ZC3H12C	99	92.360	Otolemur_garnettii
ENSRNOG00000012470	Zc3h12c	99	86.788	ENSOARG00000012999	ZC3H12C	97	92.112	Ovis_aries
ENSRNOG00000012470	Zc3h12c	99	92.702	ENSPPAG00000041914	ZC3H12C	99	92.702	Pan_paniscus
ENSRNOG00000012470	Zc3h12c	99	90.308	ENSPPRG00000006582	ZC3H12C	99	90.308	Panthera_pardus
ENSRNOG00000012470	Zc3h12c	86	88.006	ENSPTIG00000009995	ZC3H12C	99	88.006	Panthera_tigris_altaica
ENSRNOG00000012470	Zc3h12c	99	92.702	ENSPTRG00000050494	ZC3H12C	99	92.702	Pan_troglodytes
ENSRNOG00000012470	Zc3h12c	100	92.308	ENSPANG00000023930	ZC3H12C	100	92.308	Papio_anubis
ENSRNOG00000012470	Zc3h12c	96	83.449	ENSPSIG00000005959	ZC3H12C	100	83.912	Pelodiscus_sinensis
ENSRNOG00000012470	Zc3h12c	100	87.318	ENSPEMG00000008502	Zc3h12c	100	95.699	Peromyscus_maniculatus_bairdii
ENSRNOG00000012470	Zc3h12c	96	88.084	ENSPCIG00000022169	ZC3H12C	100	88.084	Phascolarctos_cinereus
ENSRNOG00000012470	Zc3h12c	96	92.606	ENSPPYG00000003851	ZC3H12C	100	92.606	Pongo_abelii
ENSRNOG00000012470	Zc3h12c	64	94.386	ENSPCAG00000015682	ZC3H12C	100	94.386	Procavia_capensis
ENSRNOG00000012470	Zc3h12c	99	93.957	ENSPCOG00000024737	ZC3H12C	99	93.957	Propithecus_coquereli
ENSRNOG00000012470	Zc3h12c	99	90.455	ENSPVAG00000014329	ZC3H12C	99	90.455	Pteropus_vampyrus
ENSRNOG00000012470	Zc3h12c	99	92.352	ENSRBIG00000040441	ZC3H12C	100	92.371	Rhinopithecus_bieti
ENSRNOG00000012470	Zc3h12c	99	92.352	ENSRROG00000004335	ZC3H12C	99	92.352	Rhinopithecus_roxellana
ENSRNOG00000012470	Zc3h12c	99	93.273	ENSSBOG00000025582	ZC3H12C	100	93.310	Saimiri_boliviensis_boliviensis
ENSRNOG00000012470	Zc3h12c	99	85.358	ENSSHAG00000005597	ZC3H12C	100	88.084	Sarcophilus_harrisii
ENSRNOG00000012470	Zc3h12c	71	95.375	ENSSARG00000003433	ZC3H12C	100	95.375	Sorex_araneus
ENSRNOG00000012470	Zc3h12c	99	85.455	ENSSPUG00000001832	ZC3H12C	99	85.455	Sphenodon_punctatus
ENSRNOG00000012470	Zc3h12c	100	92.881	ENSSSCG00000015014	ZC3H12C	100	93.200	Sus_scrofa
ENSRNOG00000012470	Zc3h12c	72	87.344	ENSTGUG00000011244	ZC3H12C	100	87.344	Taeniopygia_guttata
ENSRNOG00000012470	Zc3h12c	99	92.922	ENSTTRG00000005096	ZC3H12C	100	92.922	Tursiops_truncatus
ENSRNOG00000012470	Zc3h12c	99	92.694	ENSUAMG00000006051	ZC3H12C	99	92.601	Ursus_americanus
ENSRNOG00000012470	Zc3h12c	99	92.264	ENSUMAG00000007283	ZC3H12C	99	92.264	Ursus_maritimus
ENSRNOG00000012470	Zc3h12c	88	90.880	ENSVPAG00000003110	ZC3H12C	88	90.880	Vicugna_pacos
ENSRNOG00000012470	Zc3h12c	99	70.079	ENSXETG00000033837	ZC3H12C	99	70.662	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0046872	metal ion binding	-	IEA	Function