EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012602 (Gene tree)
Gene ID: 312824
Gene Symbol: Recql
Alias: LOC312824
Full Name: RecQ like helicase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 24486 bases
Position: chr4:176581897-176606382
Accession: 1311071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000060671	ResIII	PF04851.15	1.5e-06	1	1
ENSRNOP00000060671	DEAD	PF00270.29	2.2e-16	1	1
ENSRNOP00000073537	DEAD	PF00270.29	1.9e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000086365	-	1808	XM_008763380	ENSRNOP00000073537	510 (aa)	XP_008761602	A0A0G2K5S2
ENSRNOT00000065576	-	2387	XM_006237617	ENSRNOP00000060671	621 (aa)	XP_006237679	Q6AYJ1

Gene Model

Click here to download ENSRNOG00000012602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012602	Recql	99	84.980	ENSG00000004700	RECQL	100	82.412	Homo_sapiens
ENSRNOG00000012602	Recql	99	83.202	ENSAMEG00000016233	RECQL	96	80.193	Ailuropoda_melanoleuca
ENSRNOG00000012602	Recql	94	62.213	ENSACIG00000020781	recql	93	58.194	Amphilophus_citrinellus
ENSRNOG00000012602	Recql	95	60.370	ENSAOCG00000010244	recql	96	56.301	Amphiprion_ocellaris
ENSRNOG00000012602	Recql	96	59.838	ENSAPEG00000002040	recql	96	55.449	Amphiprion_percula
ENSRNOG00000012602	Recql	96	61.258	ENSATEG00000023342	recql	95	57.591	Anabas_testudineus
ENSRNOG00000012602	Recql	93	80.591	ENSAPLG00000003404	RECQL	95	72.846	Anas_platyrhynchos
ENSRNOG00000012602	Recql	73	77.384	ENSACAG00000017383	RECQL	99	77.384	Anolis_carolinensis
ENSRNOG00000012602	Recql	99	85.178	ENSANAG00000035372	RECQL	96	83.253	Aotus_nancymaae
ENSRNOG00000012602	Recql	93	63.025	ENSACLG00000021416	recql	93	55.414	Astatotilapia_calliptera
ENSRNOG00000012602	Recql	99	62.055	ENSAMXG00000014249	recql	94	58.132	Astyanax_mexicanus
ENSRNOG00000012602	Recql	98	84.600	ENSBTAG00000021083	RECQL	95	82.764	Bos_taurus
ENSRNOG00000012602	Recql	98	47.244	WBGene00019334	K02F3.12	98	44.318	Caenorhabditis_elegans
ENSRNOG00000012602	Recql	98	84.369	ENSCJAG00000044420	RECQL	95	82.736	Callithrix_jacchus
ENSRNOG00000012602	Recql	99	83.597	ENSCAFG00000012221	RECQL	96	80.837	Canis_familiaris
ENSRNOG00000012602	Recql	99	83.597	ENSCAFG00020007872	RECQL	96	80.837	Canis_lupus_dingo
ENSRNOG00000012602	Recql	99	83.597	ENSCHIG00000024281	RECQL	98	81.965	Capra_hircus
ENSRNOG00000012602	Recql	99	84.190	ENSTSYG00000009224	RECQL	96	83.092	Carlito_syrichta
ENSRNOG00000012602	Recql	99	87.129	ENSCPOG00000024644	RECQL	95	85.484	Cavia_porcellus
ENSRNOG00000012602	Recql	99	84.585	ENSCCAG00000028085	RECQL	96	83.253	Cebus_capucinus
ENSRNOG00000012602	Recql	99	84.980	ENSCATG00000036038	RECQL	96	83.442	Cercocebus_atys
ENSRNOG00000012602	Recql	99	85.573	ENSCLAG00000014618	RECQL	96	83.897	Chinchilla_lanigera
ENSRNOG00000012602	Recql	99	84.585	ENSCSAG00000007974	RECQL	96	83.092	Chlorocebus_sabaeus
ENSRNOG00000012602	Recql	85	94.231	ENSCHOG00000002452	RECQL	85	82.171	Choloepus_hoffmanni
ENSRNOG00000012602	Recql	96	78.411	ENSCPBG00000009109	RECQL	92	75.413	Chrysemys_picta_bellii
ENSRNOG00000012602	Recql	91	47.854	ENSCING00000004012	-	92	43.696	Ciona_intestinalis
ENSRNOG00000012602	Recql	90	44.872	ENSCSAVG00000011052	-	99	42.509	Ciona_savignyi
ENSRNOG00000012602	Recql	99	84.190	ENSCANG00000035259	RECQL	96	82.630	Colobus_angolensis_palliatus
ENSRNOG00000012602	Recql	99	89.921	ENSCGRG00001015141	Recql	96	88.245	Cricetulus_griseus_chok1gshd
ENSRNOG00000012602	Recql	99	89.921	ENSCGRG00000003545	Recql	96	88.245	Cricetulus_griseus_crigri
ENSRNOG00000012602	Recql	97	59.960	ENSCSEG00000015932	recql	96	56.291	Cynoglossus_semilaevis
ENSRNOG00000012602	Recql	93	62.815	ENSCVAG00000014613	recql	93	57.949	Cyprinodon_variegatus
ENSRNOG00000012602	Recql	96	62.146	ENSDARG00000007175	recql	96	58.023	Danio_rerio
ENSRNOG00000012602	Recql	77	86.486	ENSDNOG00000013557	RECQL	99	86.486	Dasypus_novemcinctus
ENSRNOG00000012602	Recql	95	82.341	ENSDORG00000015884	Recql	100	77.844	Dipodomys_ordii
ENSRNOG00000012602	Recql	60	73.548	ENSETEG00000018325	-	58	73.548	Echinops_telfairi
ENSRNOG00000012602	Recql	98	75.547	ENSETEG00000018631	-	95	75.000	Echinops_telfairi
ENSRNOG00000012602	Recql	98	83.600	ENSEASG00005014041	RECQL	95	85.598	Equus_asinus_asinus
ENSRNOG00000012602	Recql	99	83.432	ENSECAG00000024762	RECQL	86	80.417	Equus_caballus
ENSRNOG00000012602	Recql	94	63.389	ENSELUG00000011528	recql	93	58.824	Esox_lucius
ENSRNOG00000012602	Recql	99	83.992	ENSFCAG00000030888	RECQL	95	81.481	Felis_catus
ENSRNOG00000012602	Recql	98	75.697	ENSFALG00000002635	RECQL	93	72.773	Ficedula_albicollis
ENSRNOG00000012602	Recql	97	87.045	ENSFDAG00000019693	RECQL	94	85.222	Fukomys_damarensis
ENSRNOG00000012602	Recql	97	61.055	ENSFHEG00000014563	recql	93	58.221	Fundulus_heteroclitus
ENSRNOG00000012602	Recql	91	58.190	ENSGMOG00000010504	recql	100	57.594	Gadus_morhua
ENSRNOG00000012602	Recql	96	77.143	ENSGALG00000013174	RECQL	92	73.223	Gallus_gallus
ENSRNOG00000012602	Recql	98	58.847	ENSGACG00000001005	recql	98	56.899	Gasterosteus_aculeatus
ENSRNOG00000012602	Recql	96	78.819	ENSGAGG00000025428	RECQL	92	75.578	Gopherus_agassizii
ENSRNOG00000012602	Recql	99	84.387	ENSGGOG00000010985	RECQL	96	82.287	Gorilla_gorilla
ENSRNOG00000012602	Recql	93	63.025	ENSHBUG00000001341	recql	92	58.487	Haplochromis_burtoni
ENSRNOG00000012602	Recql	99	86.364	ENSHGLG00000009712	RECQL	97	84.541	Heterocephalus_glaber_female
ENSRNOG00000012602	Recql	99	86.166	ENSHGLG00100015306	RECQL	97	84.142	Heterocephalus_glaber_male
ENSRNOG00000012602	Recql	98	60.835	ENSHCOG00000012735	recql	96	57.756	Hippocampus_comes
ENSRNOG00000012602	Recql	94	63.732	ENSIPUG00000024092	recql	92	55.873	Ictalurus_punctatus
ENSRNOG00000012602	Recql	99	79.051	ENSSTOG00000006328	RECQL	96	78.862	Ictidomys_tridecemlineatus
ENSRNOG00000012602	Recql	99	81.818	ENSJJAG00000017339	Recql	99	82.155	Jaculus_jaculus
ENSRNOG00000012602	Recql	99	60.119	ENSKMAG00000011232	recql	96	55.538	Kryptolebias_marmoratus
ENSRNOG00000012602	Recql	96	60.772	ENSLBEG00000023652	recql	95	56.543	Labrus_bergylta
ENSRNOG00000012602	Recql	95	73.717	ENSLACG00000011482	RECQL	93	69.767	Latimeria_chalumnae
ENSRNOG00000012602	Recql	99	52.855	ENSLOCG00000015393	recql	95	52.855	Lepisosteus_oculatus
ENSRNOG00000012602	Recql	99	84.387	ENSLAFG00000000963	RECQL	95	82.602	Loxodonta_africana
ENSRNOG00000012602	Recql	99	84.783	ENSMFAG00000031470	RECQL	96	83.279	Macaca_fascicularis
ENSRNOG00000012602	Recql	99	84.783	ENSMMUG00000010857	RECQL	96	83.253	Macaca_mulatta
ENSRNOG00000012602	Recql	99	84.783	ENSMNEG00000031827	RECQL	96	83.279	Macaca_nemestrina
ENSRNOG00000012602	Recql	95	86.983	ENSMLEG00000039659	RECQL	99	84.975	Mandrillus_leucophaeus
ENSRNOG00000012602	Recql	99	59.449	ENSMAMG00000023289	recql	96	56.571	Mastacembelus_armatus
ENSRNOG00000012602	Recql	93	63.025	ENSMZEG00005016027	recql	92	58.487	Maylandia_zebra
ENSRNOG00000012602	Recql	95	79.132	ENSMGAG00000013629	RECQL	92	74.711	Meleagris_gallopavo
ENSRNOG00000012602	Recql	97	78.536	ENSMAUG00000010642	Recql	100	85.629	Mesocricetus_auratus
ENSRNOG00000012602	Recql	99	82.574	ENSMICG00000002664	RECQL	96	80.806	Microcebus_murinus
ENSRNOG00000012602	Recql	97	88.206	ENSMOCG00000007093	Recql	95	88.206	Microtus_ochrogaster
ENSRNOG00000012602	Recql	95	60.700	ENSMMOG00000007279	recql	93	57.119	Mola_mola
ENSRNOG00000012602	Recql	98	82.249	ENSMODG00000017805	RECQL	94	79.545	Monodelphis_domestica
ENSRNOG00000012602	Recql	93	62.815	ENSMALG00000004415	recql	92	57.815	Monopterus_albus
ENSRNOG00000012602	Recql	99	91.107	MGP_CAROLIEiJ_G0029030	Recql	98	89.839	Mus_caroli
ENSRNOG00000012602	Recql	99	90.119	ENSMUSG00000030243	Recql	98	88.871	Mus_musculus
ENSRNOG00000012602	Recql	99	90.909	MGP_PahariEiJ_G0022791	Recql	100	89.820	Mus_pahari
ENSRNOG00000012602	Recql	99	90.711	MGP_SPRETEiJ_G0030085	Recql	98	89.677	Mus_spretus
ENSRNOG00000012602	Recql	99	83.235	ENSMPUG00000000202	RECQL	96	80.386	Mustela_putorius_furo
ENSRNOG00000012602	Recql	98	85.000	ENSMLUG00000005741	RECQL	95	82.276	Myotis_lucifugus
ENSRNOG00000012602	Recql	99	68.429	ENSNGAG00000020417	-	94	68.429	Nannospalax_galili
ENSRNOG00000012602	Recql	99	86.561	ENSNGAG00000010997	-	96	85.668	Nannospalax_galili
ENSRNOG00000012602	Recql	94	63.180	ENSNBRG00000020825	recql	97	57.166	Neolamprologus_brichardi
ENSRNOG00000012602	Recql	99	85.178	ENSNLEG00000004797	RECQL	96	83.575	Nomascus_leucogenys
ENSRNOG00000012602	Recql	95	87.397	ENSOPRG00000007493	RECQL	100	85.309	Ochotona_princeps
ENSRNOG00000012602	Recql	99	84.585	ENSODEG00000010240	RECQL	100	83.225	Octodon_degus
ENSRNOG00000012602	Recql	93	62.605	ENSONIG00000001694	recql	92	58.487	Oreochromis_niloticus
ENSRNOG00000012602	Recql	54	48.094	ENSOANG00000021930	-	100	48.094	Ornithorhynchus_anatinus
ENSRNOG00000012602	Recql	99	84.190	ENSOCUG00000008787	RECQL	96	82.448	Oryctolagus_cuniculus
ENSRNOG00000012602	Recql	99	59.486	ENSORLG00000012853	recql	98	52.736	Oryzias_latipes
ENSRNOG00000012602	Recql	99	59.486	ENSORLG00020020245	recql	98	55.167	Oryzias_latipes_hni
ENSRNOG00000012602	Recql	97	58.904	ENSORLG00015018708	recql	98	55.167	Oryzias_latipes_hsok
ENSRNOG00000012602	Recql	97	59.100	ENSOMEG00000019484	recql	98	55.892	Oryzias_melastigma
ENSRNOG00000012602	Recql	99	84.158	ENSOGAG00000004754	RECQL	95	82.630	Otolemur_garnettii
ENSRNOG00000012602	Recql	99	84.190	ENSOARG00000020343	RECQL	96	82.287	Ovis_aries
ENSRNOG00000012602	Recql	99	84.980	ENSPPAG00000030306	RECQL	92	83.447	Pan_paniscus
ENSRNOG00000012602	Recql	99	83.992	ENSPPRG00000010371	RECQL	95	81.320	Panthera_pardus
ENSRNOG00000012602	Recql	99	83.992	ENSPTIG00000008593	RECQL	96	81.159	Panthera_tigris_altaica
ENSRNOG00000012602	Recql	99	84.783	ENSPTRG00000004758	RECQL	95	82.637	Pan_troglodytes
ENSRNOG00000012602	Recql	99	84.585	ENSPANG00000003394	RECQL	96	83.117	Papio_anubis
ENSRNOG00000012602	Recql	97	60.324	ENSPKIG00000008072	recql	96	57.005	Paramormyrops_kingsleyae
ENSRNOG00000012602	Recql	99	75.204	ENSPSIG00000002979	RECQL	91	76.119	Pelodiscus_sinensis
ENSRNOG00000012602	Recql	94	61.088	ENSPMGG00000011010	recql	91	56.566	Periophthalmus_magnuspinnatus
ENSRNOG00000012602	Recql	99	90.909	ENSPEMG00000016418	Recql	98	90.420	Peromyscus_maniculatus_bairdii
ENSRNOG00000012602	Recql	95	60.494	ENSPMAG00000005495	recql	99	58.167	Petromyzon_marinus
ENSRNOG00000012602	Recql	98	82.129	ENSPCIG00000022452	RECQL	94	78.467	Phascolarctos_cinereus
ENSRNOG00000012602	Recql	93	62.105	ENSPFOG00000000940	recql	90	58.376	Poecilia_formosa
ENSRNOG00000012602	Recql	93	61.895	ENSPLAG00000006194	recql	89	58.206	Poecilia_latipinna
ENSRNOG00000012602	Recql	93	61.895	ENSPMEG00000013399	recql	90	57.454	Poecilia_mexicana
ENSRNOG00000012602	Recql	93	61.474	ENSPREG00000012991	recql	91	57.699	Poecilia_reticulata
ENSRNOG00000012602	Recql	99	84.387	ENSPPYG00000004352	RECQL	96	82.770	Pongo_abelii
ENSRNOG00000012602	Recql	85	96.154	ENSPCOG00000027353	RECQL	94	80.240	Propithecus_coquereli
ENSRNOG00000012602	Recql	99	84.783	ENSPVAG00000002457	RECQL	89	82.669	Pteropus_vampyrus
ENSRNOG00000012602	Recql	93	63.025	ENSPNYG00000016013	recql	92	58.487	Pundamilia_nyererei
ENSRNOG00000012602	Recql	99	62.451	ENSPNAG00000029317	recql	94	59.032	Pygocentrus_nattereri
ENSRNOG00000012602	Recql	99	84.387	ENSRBIG00000034966	RECQL	96	82.955	Rhinopithecus_bieti
ENSRNOG00000012602	Recql	99	84.387	ENSRROG00000010234	RECQL	96	82.955	Rhinopithecus_roxellana
ENSRNOG00000012602	Recql	99	84.980	ENSSBOG00000005645	RECQL	96	83.414	Saimiri_boliviensis_boliviensis
ENSRNOG00000012602	Recql	99	81.980	ENSSHAG00000015815	RECQL	95	78.479	Sarcophilus_harrisii
ENSRNOG00000012602	Recql	94	64.644	ENSSFOG00015002537	recql	91	61.318	Scleropages_formosus
ENSRNOG00000012602	Recql	99	60.198	ENSSMAG00000014910	recql	96	56.320	Scophthalmus_maximus
ENSRNOG00000012602	Recql	97	61.089	ENSSDUG00000019205	recql	94	57.730	Seriola_dumerili
ENSRNOG00000012602	Recql	97	61.089	ENSSLDG00000013921	recql	94	57.730	Seriola_lalandi_dorsalis
ENSRNOG00000012602	Recql	97	57.422	ENSSPUG00000018613	RECQL	97	58.167	Sphenodon_punctatus
ENSRNOG00000012602	Recql	93	61.765	ENSSPAG00000008384	recql	93	56.830	Stegastes_partitus
ENSRNOG00000012602	Recql	99	84.783	ENSSSCG00000000580	RECQL	95	84.363	Sus_scrofa
ENSRNOG00000012602	Recql	93	79.114	ENSTGUG00000011730	RECQL	93	72.195	Taeniopygia_guttata
ENSRNOG00000012602	Recql	99	59.091	ENSTRUG00000000534	recql	98	57.348	Takifugu_rubripes
ENSRNOG00000012602	Recql	96	59.919	ENSTNIG00000007242	recql	96	56.739	Tetraodon_nigroviridis
ENSRNOG00000012602	Recql	95	82.413	ENSTBEG00000004653	RECQL	86	82.413	Tupaia_belangeri
ENSRNOG00000012602	Recql	85	94.231	ENSTTRG00000003296	RECQL	85	82.687	Tursiops_truncatus
ENSRNOG00000012602	Recql	99	83.004	ENSUAMG00000003261	RECQL	95	81.188	Ursus_americanus
ENSRNOG00000012602	Recql	99	83.202	ENSUMAG00000001523	RECQL	96	80.837	Ursus_maritimus
ENSRNOG00000012602	Recql	99	84.585	ENSVPAG00000007546	RECQL	85	84.335	Vicugna_pacos
ENSRNOG00000012602	Recql	99	83.794	ENSVVUG00000001101	RECQL	96	81.159	Vulpes_vulpes
ENSRNOG00000012602	Recql	90	73.523	ENSXETG00000013524	recql	88	73.742	Xenopus_tropicalis
ENSRNOG00000012602	Recql	93	61.053	ENSXMAG00000029316	recql	91	57.022	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000733	DNA strand renaturation	-	IEA	Process
GO:0000733	DNA strand renaturation	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003678	DNA helicase activity	-	ISO	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0006310	DNA recombination	21873635.	IBA	Process
GO:0006310	DNA recombination	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0009378	four-way junction helicase activity	21873635.	IBA	Function
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	-	IEA	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0036310	annealing helicase activity	-	ISO	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	IEA	Function