EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012692 (Gene tree)
Gene ID: 308201
Gene Symbol: Riok2
Alias: LOC308201|MGC109496
Full Name: RIO kinase 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 16826 bases
Position: chr1:59129951-59146776
Accession: 1311588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000017165	RIO1	PF01163.22	1.1e-53	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000017165	-	2166	-	ENSRNOP00000017165	551 (aa)	-	Q5I0I1

Gene Model

Click here to download ENSRNOG00000012692's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012692	Riok2	100	81.703	ENSG00000058729	RIOK2	100	81.703	Homo_sapiens
ENSRNOG00000012692	Riok2	58	81.931	ENSAPOG00000011797	riok2	100	63.506	Acanthochromis_polyacanthus
ENSRNOG00000012692	Riok2	100	81.159	ENSAMEG00000014615	RIOK2	100	81.159	Ailuropoda_melanoleuca
ENSRNOG00000012692	Riok2	58	82.555	ENSAOCG00000021840	riok2	100	64.610	Amphiprion_ocellaris
ENSRNOG00000012692	Riok2	58	81.931	ENSAPEG00000020853	riok2	100	64.247	Amphiprion_percula
ENSRNOG00000012692	Riok2	99	59.391	ENSATEG00000005671	riok2	100	62.766	Anabas_testudineus
ENSRNOG00000012692	Riok2	99	68.327	ENSACAG00000011858	RIOK2	100	68.327	Anolis_carolinensis
ENSRNOG00000012692	Riok2	100	80.978	ENSANAG00000015977	RIOK2	100	80.978	Aotus_nancymaae
ENSRNOG00000012692	Riok2	99	64.312	ENSACLG00000002755	riok2	100	64.312	Astatotilapia_calliptera
ENSRNOG00000012692	Riok2	99	66.243	ENSAMXG00000002368	riok2	100	66.243	Astyanax_mexicanus
ENSRNOG00000012692	Riok2	100	82.246	ENSBTAG00000011763	RIOK2	100	82.246	Bos_taurus
ENSRNOG00000012692	Riok2	57	59.615	WBGene00013688	riok-2	59	59.615	Caenorhabditis_elegans
ENSRNOG00000012692	Riok2	100	79.710	ENSCJAG00000040045	RIOK2	100	79.710	Callithrix_jacchus
ENSRNOG00000012692	Riok2	100	80.254	ENSCAFG00000007745	RIOK2	100	80.254	Canis_familiaris
ENSRNOG00000012692	Riok2	62	81.105	ENSCAFG00020015532	-	94	81.105	Canis_lupus_dingo
ENSRNOG00000012692	Riok2	100	78.986	ENSCAFG00020011453	-	100	78.986	Canis_lupus_dingo
ENSRNOG00000012692	Riok2	100	81.851	ENSCHIG00000016709	RIOK2	100	81.851	Capra_hircus
ENSRNOG00000012692	Riok2	100	80.978	ENSTSYG00000001916	RIOK2	100	80.978	Carlito_syrichta
ENSRNOG00000012692	Riok2	96	72.401	ENSCAPG00000006762	RIOK2	100	72.401	Cavia_aperea
ENSRNOG00000012692	Riok2	99	79.855	ENSCPOG00000010551	RIOK2	100	79.855	Cavia_porcellus
ENSRNOG00000012692	Riok2	100	80.072	ENSCCAG00000025712	RIOK2	100	80.072	Cebus_capucinus
ENSRNOG00000012692	Riok2	100	82.065	ENSCATG00000035047	RIOK2	100	82.065	Cercocebus_atys
ENSRNOG00000012692	Riok2	100	79.891	ENSCLAG00000006790	RIOK2	100	79.891	Chinchilla_lanigera
ENSRNOG00000012692	Riok2	68	75.532	ENSCSAG00000014233	RIOK2	100	75.532	Chlorocebus_sabaeus
ENSRNOG00000012692	Riok2	82	84.615	ENSCHOG00000003803	RIOK2	82	84.615	Choloepus_hoffmanni
ENSRNOG00000012692	Riok2	99	67.845	ENSCPBG00000015732	RIOK2	100	67.845	Chrysemys_picta_bellii
ENSRNOG00000012692	Riok2	99	50.273	ENSCSAVG00000006970	-	100	50.273	Ciona_savignyi
ENSRNOG00000012692	Riok2	100	71.661	ENSCANG00000042169	RIOK2	100	71.661	Colobus_angolensis_palliatus
ENSRNOG00000012692	Riok2	100	88.043	ENSCGRG00001000871	Riok2	100	88.043	Cricetulus_griseus_chok1gshd
ENSRNOG00000012692	Riok2	100	88.043	ENSCGRG00000008541	Riok2	100	88.043	Cricetulus_griseus_crigri
ENSRNOG00000012692	Riok2	99	64.014	ENSCSEG00000014204	riok2	100	64.973	Cynoglossus_semilaevis
ENSRNOG00000012692	Riok2	99	63.943	ENSCVAG00000012034	riok2	100	64.476	Cyprinodon_variegatus
ENSRNOG00000012692	Riok2	99	66.306	ENSDARG00000035264	riok2	100	66.306	Danio_rerio
ENSRNOG00000012692	Riok2	100	80.108	ENSDNOG00000037305	RIOK2	100	80.108	Dasypus_novemcinctus
ENSRNOG00000012692	Riok2	100	81.307	ENSDORG00000016345	Riok2	100	81.307	Dipodomys_ordii
ENSRNOG00000012692	Riok2	98	44.580	FBgn0039306	RIOK2	99	44.755	Drosophila_melanogaster
ENSRNOG00000012692	Riok2	62	95.238	ENSETEG00000013220	-	80	95.238	Echinops_telfairi
ENSRNOG00000012692	Riok2	86	54.244	ENSEBUG00000006099	riok2	82	54.865	Eptatretus_burgeri
ENSRNOG00000012692	Riok2	100	82.246	ENSEASG00005018799	RIOK2	100	82.246	Equus_asinus_asinus
ENSRNOG00000012692	Riok2	100	81.159	ENSECAG00000018441	RIOK2	100	81.159	Equus_caballus
ENSRNOG00000012692	Riok2	88	64.384	ENSEEUG00000013535	RIOK2	88	64.384	Erinaceus_europaeus
ENSRNOG00000012692	Riok2	71	79.725	ENSELUG00000011239	riok2	96	79.725	Esox_lucius
ENSRNOG00000012692	Riok2	100	80.072	ENSFCAG00000024077	RIOK2	100	80.072	Felis_catus
ENSRNOG00000012692	Riok2	95	63.889	ENSFALG00000010277	RIOK2	100	64.552	Ficedula_albicollis
ENSRNOG00000012692	Riok2	100	79.783	ENSFDAG00000015288	RIOK2	100	79.783	Fukomys_damarensis
ENSRNOG00000012692	Riok2	58	80.685	ENSFHEG00000010950	riok2	100	64.428	Fundulus_heteroclitus
ENSRNOG00000012692	Riok2	58	79.128	ENSGMOG00000011354	riok2	100	62.182	Gadus_morhua
ENSRNOG00000012692	Riok2	99	65.771	ENSGALG00000015288	RIOK2	100	65.771	Gallus_gallus
ENSRNOG00000012692	Riok2	58	80.997	ENSGAFG00000012056	riok2	100	65.099	Gambusia_affinis
ENSRNOG00000012692	Riok2	77	79.439	ENSGACG00000009754	riok2	100	62.250	Gasterosteus_aculeatus
ENSRNOG00000012692	Riok2	99	68.638	ENSGAGG00000013791	RIOK2	100	68.638	Gopherus_agassizii
ENSRNOG00000012692	Riok2	100	81.703	ENSGGOG00000022136	RIOK2	100	81.703	Gorilla_gorilla
ENSRNOG00000012692	Riok2	99	64.065	ENSHBUG00000010705	riok2	100	64.493	Haplochromis_burtoni
ENSRNOG00000012692	Riok2	100	80.797	ENSHGLG00000009139	-	100	80.797	Heterocephalus_glaber_female
ENSRNOG00000012692	Riok2	100	80.616	ENSHGLG00100014700	RIOK2	100	80.616	Heterocephalus_glaber_male
ENSRNOG00000012692	Riok2	78	82.555	ENSHCOG00000015555	riok2	100	63.929	Hippocampus_comes
ENSRNOG00000012692	Riok2	99	62.478	ENSIPUG00000007450	riok2	100	64.505	Ictalurus_punctatus
ENSRNOG00000012692	Riok2	100	82.246	ENSSTOG00000006659	RIOK2	100	82.246	Ictidomys_tridecemlineatus
ENSRNOG00000012692	Riok2	100	79.891	ENSJJAG00000016582	Riok2	100	79.891	Jaculus_jaculus
ENSRNOG00000012692	Riok2	99	63.273	ENSKMAG00000013229	riok2	100	64.000	Kryptolebias_marmoratus
ENSRNOG00000012692	Riok2	99	63.148	ENSLBEG00000015421	riok2	100	63.834	Labrus_bergylta
ENSRNOG00000012692	Riok2	99	62.655	ENSLACG00000000274	RIOK2	100	63.879	Latimeria_chalumnae
ENSRNOG00000012692	Riok2	99	65.709	ENSLOCG00000006432	riok2	100	65.709	Lepisosteus_oculatus
ENSRNOG00000012692	Riok2	100	81.884	ENSLAFG00000000919	RIOK2	100	81.884	Loxodonta_africana
ENSRNOG00000012692	Riok2	100	80.978	ENSMFAG00000033056	RIOK2	100	80.978	Macaca_fascicularis
ENSRNOG00000012692	Riok2	100	81.159	ENSMMUG00000000307	RIOK2	100	81.159	Macaca_mulatta
ENSRNOG00000012692	Riok2	100	81.159	ENSMNEG00000029708	RIOK2	100	81.159	Macaca_nemestrina
ENSRNOG00000012692	Riok2	89	80.164	ENSMLEG00000040038	RIOK2	100	80.164	Mandrillus_leucophaeus
ENSRNOG00000012692	Riok2	86	67.742	ENSMAMG00000013310	riok2	100	64.557	Mastacembelus_armatus
ENSRNOG00000012692	Riok2	99	61.702	ENSMZEG00005017067	riok2	100	64.493	Maylandia_zebra
ENSRNOG00000012692	Riok2	97	64.545	ENSMGAG00000006986	RIOK2	99	64.545	Meleagris_gallopavo
ENSRNOG00000012692	Riok2	77	93.333	ENSMAUG00000019527	Riok2	100	93.333	Mesocricetus_auratus
ENSRNOG00000012692	Riok2	100	82.640	ENSMICG00000037437	RIOK2	100	82.640	Microcebus_murinus
ENSRNOG00000012692	Riok2	100	87.138	ENSMOCG00000004230	Riok2	100	87.138	Microtus_ochrogaster
ENSRNOG00000012692	Riok2	58	81.308	ENSMMOG00000018155	riok2	100	64.260	Mola_mola
ENSRNOG00000012692	Riok2	99	72.776	ENSMODG00000015548	RIOK2	100	72.776	Monodelphis_domestica
ENSRNOG00000012692	Riok2	99	63.110	ENSMALG00000011266	riok2	100	63.110	Monopterus_albus
ENSRNOG00000012692	Riok2	100	89.292	ENSMUSG00000116564	Riok2	100	96.899	Mus_musculus
ENSRNOG00000012692	Riok2	100	82.609	ENSMPUG00000004450	RIOK2	100	82.609	Mustela_putorius_furo
ENSRNOG00000012692	Riok2	100	82.428	ENSMLUG00000016113	RIOK2	100	82.428	Myotis_lucifugus
ENSRNOG00000012692	Riok2	100	83.152	ENSNGAG00000017971	Riok2	100	83.152	Nannospalax_galili
ENSRNOG00000012692	Riok2	100	81.736	ENSNLEG00000014474	RIOK2	100	81.736	Nomascus_leucogenys
ENSRNOG00000012692	Riok2	96	53.659	ENSMEUG00000010529	RIOK2	100	53.659	Notamacropus_eugenii
ENSRNOG00000012692	Riok2	99	64.065	ENSONIG00000013689	riok2	100	64.065	Oreochromis_niloticus
ENSRNOG00000012692	Riok2	96	71.751	ENSOANG00000001225	RIOK2	99	71.887	Ornithorhynchus_anatinus
ENSRNOG00000012692	Riok2	100	81.884	ENSOCUG00000001656	RIOK2	100	81.884	Oryctolagus_cuniculus
ENSRNOG00000012692	Riok2	58	80.374	ENSORLG00020011553	riok2	100	63.225	Oryzias_latipes_hni
ENSRNOG00000012692	Riok2	58	80.062	ENSORLG00015001085	riok2	100	62.727	Oryzias_latipes_hsok
ENSRNOG00000012692	Riok2	58	81.308	ENSOMEG00000004617	riok2	100	63.225	Oryzias_melastigma
ENSRNOG00000012692	Riok2	100	75.949	ENSOGAG00000008467	RIOK2	100	75.949	Otolemur_garnettii
ENSRNOG00000012692	Riok2	100	82.214	ENSOARG00000018138	RIOK2	100	82.214	Ovis_aries
ENSRNOG00000012692	Riok2	100	78.623	ENSPPAG00000027414	RIOK2	98	81.330	Pan_paniscus
ENSRNOG00000012692	Riok2	100	79.891	ENSPPRG00000000169	RIOK2	100	79.891	Panthera_pardus
ENSRNOG00000012692	Riok2	100	80.254	ENSPTIG00000008344	RIOK2	100	80.254	Panthera_tigris_altaica
ENSRNOG00000012692	Riok2	100	81.703	ENSPTRG00000017100	RIOK2	100	81.703	Pan_troglodytes
ENSRNOG00000012692	Riok2	100	81.884	ENSPANG00000011977	RIOK2	100	81.884	Papio_anubis
ENSRNOG00000012692	Riok2	99	65.371	ENSPKIG00000016220	riok2	100	66.078	Paramormyrops_kingsleyae
ENSRNOG00000012692	Riok2	99	67.553	ENSPSIG00000013238	RIOK2	100	67.553	Pelodiscus_sinensis
ENSRNOG00000012692	Riok2	58	80.685	ENSPMGG00000021822	riok2	100	61.887	Periophthalmus_magnuspinnatus
ENSRNOG00000012692	Riok2	100	88.768	ENSPEMG00000018872	Riok2	100	88.768	Peromyscus_maniculatus_bairdii
ENSRNOG00000012692	Riok2	58	80.374	ENSPFOG00000017064	riok2	100	62.567	Poecilia_formosa
ENSRNOG00000012692	Riok2	99	62.433	ENSPLAG00000003043	riok2	100	63.148	Poecilia_latipinna
ENSRNOG00000012692	Riok2	99	63.262	ENSPMEG00000007622	riok2	100	63.441	Poecilia_mexicana
ENSRNOG00000012692	Riok2	58	80.997	ENSPREG00000002255	riok2	100	63.148	Poecilia_reticulata
ENSRNOG00000012692	Riok2	100	81.341	ENSPPYG00000015654	RIOK2	100	81.341	Pongo_abelii
ENSRNOG00000012692	Riok2	99	78.221	ENSPCAG00000006508	RIOK2	99	78.221	Procavia_capensis
ENSRNOG00000012692	Riok2	100	82.971	ENSPCOG00000024315	RIOK2	100	82.971	Propithecus_coquereli
ENSRNOG00000012692	Riok2	100	76.770	ENSPVAG00000016658	RIOK2	100	76.770	Pteropus_vampyrus
ENSRNOG00000012692	Riok2	99	64.493	ENSPNYG00000018868	riok2	100	64.493	Pundamilia_nyererei
ENSRNOG00000012692	Riok2	99	65.108	ENSPNAG00000010841	riok2	100	65.108	Pygocentrus_nattereri
ENSRNOG00000012692	Riok2	99	81.736	ENSRBIG00000030658	RIOK2	99	81.736	Rhinopithecus_bieti
ENSRNOG00000012692	Riok2	99	81.555	ENSRROG00000039203	RIOK2	99	81.555	Rhinopithecus_roxellana
ENSRNOG00000012692	Riok2	65	41.582	YNL207W	-	92	41.582	Saccharomyces_cerevisiae
ENSRNOG00000012692	Riok2	100	80.616	ENSSBOG00000032152	RIOK2	100	80.616	Saimiri_boliviensis_boliviensis
ENSRNOG00000012692	Riok2	99	71.735	ENSSHAG00000006935	-	100	71.735	Sarcophilus_harrisii
ENSRNOG00000012692	Riok2	99	64.499	ENSSFOG00015005966	riok2	100	64.499	Scleropages_formosus
ENSRNOG00000012692	Riok2	58	82.555	ENSSMAG00000010529	riok2	100	65.099	Scophthalmus_maximus
ENSRNOG00000012692	Riok2	58	81.931	ENSSDUG00000014891	riok2	100	64.610	Seriola_dumerili
ENSRNOG00000012692	Riok2	58	81.931	ENSSLDG00000001926	riok2	100	64.791	Seriola_lalandi_dorsalis
ENSRNOG00000012692	Riok2	100	66.786	ENSSARG00000001798	RIOK2	100	66.786	Sorex_araneus
ENSRNOG00000012692	Riok2	74	68.460	ENSSPUG00000003509	RIOK2	92	68.460	Sphenodon_punctatus
ENSRNOG00000012692	Riok2	54	82.155	ENSSPAG00000016554	riok2	100	64.272	Stegastes_partitus
ENSRNOG00000012692	Riok2	99	63.781	ENSTGUG00000001223	RIOK2	100	63.958	Taeniopygia_guttata
ENSRNOG00000012692	Riok2	58	80.685	ENSTRUG00000011455	riok2	100	63.375	Takifugu_rubripes
ENSRNOG00000012692	Riok2	80	58.929	ENSTNIG00000015401	riok2	100	59.071	Tetraodon_nigroviridis
ENSRNOG00000012692	Riok2	100	80.072	ENSTTRG00000010640	RIOK2	100	80.072	Tursiops_truncatus
ENSRNOG00000012692	Riok2	96	80.682	ENSUAMG00000008585	RIOK2	100	80.682	Ursus_americanus
ENSRNOG00000012692	Riok2	100	81.703	ENSUMAG00000006726	RIOK2	100	81.703	Ursus_maritimus
ENSRNOG00000012692	Riok2	88	95.408	ENSVPAG00000001542	RIOK2	88	95.408	Vicugna_pacos
ENSRNOG00000012692	Riok2	100	80.797	ENSVVUG00000020170	RIOK2	100	80.797	Vulpes_vulpes
ENSRNOG00000012692	Riok2	99	66.546	ENSXETG00000013194	riok2	100	66.727	Xenopus_tropicalis
ENSRNOG00000012692	Riok2	58	81.308	ENSXCOG00000016879	riok2	100	64.043	Xiphophorus_couchianus
ENSRNOG00000012692	Riok2	58	81.308	ENSXMAG00000007425	riok2	100	64.222	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0004672	protein kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process
GO:0030071	regulation of mitotic metaphase/anaphase transition	-	IEA	Process
GO:0030071	regulation of mitotic metaphase/anaphase transition	-	ISO	Process
GO:0030490	maturation of SSU-rRNA	21873635.	IBA	Process
GO:0030490	maturation of SSU-rRNA	-	ISO	Process
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component
GO:0030688	preribosome, small subunit precursor	-	ISO	Component
GO:0042274	ribosomal small subunit biogenesis	-	ISO	Process
GO:0046777	protein autophosphorylation	-	IEA	Process
GO:0046777	protein autophosphorylation	-	ISO	Process
GO:2000208	positive regulation of ribosomal small subunit export from nucleus	-	IEA	Process
GO:2000208	positive regulation of ribosomal small subunit export from nucleus	-	ISO	Process
GO:2000234	positive regulation of rRNA processing	-	IEA	Process
GO:2000234	positive regulation of rRNA processing	-	ISO	Process