EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000012771 (Gene tree)
Gene ID
314336
Gene Symbol
Ddx41
Alias
LOC314336
Full Name
DEAD-box helicase 41
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
5392 bases
Position
chr17:9631925-9637316
Accession
1311758
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000018114DEADPF00270.292.2e-4411
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000018114-2049-ENSRNOP00000018114622 (aa)-B2RYL8
Gene Model
Click here to download ENSRNOG00000012771's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012771's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000012771Ddx416339.756ENSRNOG00000023383Ddx3x6538.952
ENSRNOG00000012771Ddx416733.810ENSRNOG00000042451Ddx596433.810
ENSRNOG00000012771Ddx416636.557ENSRNOG00000050868Ddx436436.557
ENSRNOG00000012771Ddx417237.365ENSRNOG00000057231Ddx36937.365
ENSRNOG00000012771Ddx416131.169ENSRNOG00000001815Eif4a29131.169
ENSRNOG00000012771Ddx415835.556ENSRNOG00000007838Ddx477635.556
ENSRNOG00000012771Ddx415732.303ENSRNOG00000053932Ddx67132.303
ENSRNOG00000012771Ddx415734.840ENSRNOG00000001043Ddx556135.027
ENSRNOG00000012771Ddx416539.709ENSRNOG00000051170Ddx176239.709
ENSRNOG00000012771Ddx416130.649ENSRNOG00000030628Eif4a19130.649
ENSRNOG00000012771Ddx416438.916ENSRNOG00000030680Ddx56438.916
ENSRNOG00000012771Ddx415230.270ENSRNOG00000013040Ddx315330.270
ENSRNOG00000012771Ddx416739.269ENSRNOG00000002501Ddx3y6539.269
ENSRNOG00000012771Ddx416630.733ENSRNOG00000002612Ddx526830.733
ENSRNOG00000012771Ddx416438.765ENSRNOG00000026686Ddx45638.765
ENSRNOG00000012771Ddx417537.600ENSRNOG00000060154Ddx235240.371
ENSRNOG00000012771Ddx415933.423ENSRNOG00000045791Eif4a38633.423
ENSRNOG00000012771Ddx416234.158ENSRNOG00000022368Ddx498033.911
ENSRNOG00000012771Ddx415740.580ENSRNOG00000006652Ddx15640.580
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000012771Ddx4110099.035ENSG00000183258DDX4110099.035Homo_sapiens
ENSRNOG00000012771Ddx4110085.852ENSAPOG00000000935DDX419985.852Acanthochromis_polyacanthus
ENSRNOG00000012771Ddx4110098.392ENSAMEG00000018051DDX4110098.392Ailuropoda_melanoleuca
ENSRNOG00000012771Ddx419588.552ENSACIG00000008618DDX419988.644Amphilophus_citrinellus
ENSRNOG00000012771Ddx4110085.691ENSAOCG00000011755DDX4110085.691Amphiprion_ocellaris
ENSRNOG00000012771Ddx4110085.852ENSAPEG00000013433DDX4110085.852Amphiprion_percula
ENSRNOG00000012771Ddx4110086.013ENSATEG00000003317DDX4110086.013Anabas_testudineus
ENSRNOG00000012771Ddx418486.312ENSAPLG00000015985-10086.312Anas_platyrhynchos
ENSRNOG00000012771Ddx419990.836ENSACAG00000005778DDX419990.836Anolis_carolinensis
ENSRNOG00000012771Ddx4110099.196ENSANAG00000035879DDX4110099.196Aotus_nancymaae
ENSRNOG00000012771Ddx419787.336ENSACLG00000003778DDX419688.644Astatotilapia_calliptera
ENSRNOG00000012771Ddx419885.621ENSAMXG00000002956DDX419985.621Astyanax_mexicanus
ENSRNOG00000012771Ddx4110098.875ENSBTAG00000015187DDX4110098.875Bos_taurus
ENSRNOG00000012771Ddx418559.924WBGene00019245sacy-18459.475Caenorhabditis_elegans
ENSRNOG00000012771Ddx4110099.357ENSCJAG00000006595DDX4110099.357Callithrix_jacchus
ENSRNOG00000012771Ddx4110098.714ENSCAFG00000016304DDX4110098.714Canis_familiaris
ENSRNOG00000012771Ddx4110098.714ENSCAFG00020012019DDX4110098.714Canis_lupus_dingo
ENSRNOG00000012771Ddx4110098.714ENSCHIG00000009756DDX4110098.714Capra_hircus
ENSRNOG00000012771Ddx4110095.338ENSTSYG00000033318DDX4110095.338Carlito_syrichta
ENSRNOG00000012771Ddx418499.808ENSCAPG00000011375DDX4110099.808Cavia_aperea
ENSRNOG00000012771Ddx4110098.071ENSCPOG00000008770DDX4110098.071Cavia_porcellus
ENSRNOG00000012771Ddx4110099.196ENSCCAG00000036188DDX4110099.196Cebus_capucinus
ENSRNOG00000012771Ddx4110098.875ENSCATG00000013983DDX4110098.875Cercocebus_atys
ENSRNOG00000012771Ddx4110098.714ENSCLAG00000015404DDX4110098.714Chinchilla_lanigera
ENSRNOG00000012771Ddx4110098.875ENSCSAG00000008742DDX4110098.875Chlorocebus_sabaeus
ENSRNOG00000012771Ddx419395.321ENSCPBG00000022192DDX419995.406Chrysemys_picta_bellii
ENSRNOG00000012771Ddx419564.793ENSCING00000008215zf(cchc)-208768.692Ciona_intestinalis
ENSRNOG00000012771Ddx4110098.875ENSCANG00000006524DDX419998.875Colobus_angolensis_palliatus
ENSRNOG00000012771Ddx4110098.714ENSCGRG00001017112Ddx419798.714Cricetulus_griseus_chok1gshd
ENSRNOG00000012771Ddx4110098.714ENSCGRG00000007688Ddx4110098.714Cricetulus_griseus_crigri
ENSRNOG00000012771Ddx419784.314ENSCSEG00000013051DDX419885.260Cynoglossus_semilaevis
ENSRNOG00000012771Ddx419978.176ENSCVAG00000014462DDX419580.339Cyprinodon_variegatus
ENSRNOG00000012771Ddx4110097.910ENSDNOG00000046583DDX4110097.910Dasypus_novemcinctus
ENSRNOG00000012771Ddx4110098.875ENSDORG00000010781Ddx4110098.875Dipodomys_ordii
ENSRNOG00000012771Ddx419666.392FBgn0015331abs9666.332Drosophila_melanogaster
ENSRNOG00000012771Ddx418293.827ENSETEG00000012955-8293.827Echinops_telfairi
ENSRNOG00000012771Ddx419578.885ENSEBUG00000002053DDX419778.378Eptatretus_burgeri
ENSRNOG00000012771Ddx4110098.875ENSEASG00005012427DDX419998.875Equus_asinus_asinus
ENSRNOG00000012771Ddx4110098.875ENSECAG00000009688DDX419998.875Equus_caballus
ENSRNOG00000012771Ddx419289.685ENSEEUG00000001733DDX419989.753Erinaceus_europaeus
ENSRNOG00000012771Ddx4110084.405ENSELUG00000019496DDX4110084.244Esox_lucius
ENSRNOG00000012771Ddx4110098.714ENSFCAG00000001542DDX4110098.714Felis_catus
ENSRNOG00000012771Ddx419992.058ENSFALG00000008731DDX419594.915Ficedula_albicollis
ENSRNOG00000012771Ddx4110098.392ENSFDAG00000017597DDX4110098.392Fukomys_damarensis
ENSRNOG00000012771Ddx4110085.370ENSFHEG00000008904DDX4110085.370Fundulus_heteroclitus
ENSRNOG00000012771Ddx419879.180ENSGMOG00000006670DDX419979.016Gadus_morhua
ENSRNOG00000012771Ddx419992.557ENSGALG00000042994DDX419992.557Gallus_gallus
ENSRNOG00000012771Ddx419886.601ENSGAFG00000005980DDX419986.601Gambusia_affinis
ENSRNOG00000012771Ddx4110084.776ENSGACG00000018334DDX4110084.776Gasterosteus_aculeatus
ENSRNOG00000012771Ddx419394.974ENSGAGG00000018601DDX419895.230Gopherus_agassizii
ENSRNOG00000012771Ddx4110099.035ENSGGOG00000014484DDX4110099.035Gorilla_gorilla
ENSRNOG00000012771Ddx419787.336ENSHBUG00000010971DDX419688.644Haplochromis_burtoni
ENSRNOG00000012771Ddx4110098.392ENSHGLG00000015092DDX4110098.392Heterocephalus_glaber_female
ENSRNOG00000012771Ddx4110075.402ENSHGLG00000014198-10075.241Heterocephalus_glaber_female
ENSRNOG00000012771Ddx418883.333ENSHGLG00100002631-10083.333Heterocephalus_glaber_male
ENSRNOG00000012771Ddx4110098.392ENSHGLG00100018132DDX4110098.392Heterocephalus_glaber_male
ENSRNOG00000012771Ddx4110085.691ENSHCOG00000004725DDX419688.644Hippocampus_comes
ENSRNOG00000012771Ddx419985.854ENSIPUG00000016171ddx419985.854Ictalurus_punctatus
ENSRNOG00000012771Ddx4110099.035ENSSTOG00000003171DDX4110099.035Ictidomys_tridecemlineatus
ENSRNOG00000012771Ddx4110099.035ENSJJAG00000010470Ddx4110099.035Jaculus_jaculus
ENSRNOG00000012771Ddx4110085.691ENSKMAG00000019331DDX4110085.691Kryptolebias_marmoratus
ENSRNOG00000012771Ddx4110085.852ENSLBEG00000028087DDX419688.983Labrus_bergylta
ENSRNOG00000012771Ddx419989.516ENSLACG00000012899DDX419988.907Latimeria_chalumnae
ENSRNOG00000012771Ddx4110086.977ENSLOCG00000011956DDX419590.169Lepisosteus_oculatus
ENSRNOG00000012771Ddx419998.858ENSLAFG00000026418DDX4110098.858Loxodonta_africana
ENSRNOG00000012771Ddx4110098.875ENSMFAG00000031761DDX4110098.875Macaca_fascicularis
ENSRNOG00000012771Ddx4110098.875ENSMMUG00000016911DDX4110098.875Macaca_mulatta
ENSRNOG00000012771Ddx4110098.875ENSMNEG00000028476DDX419998.875Macaca_nemestrina
ENSRNOG00000012771Ddx4110098.875ENSMLEG00000040870DDX419998.875Mandrillus_leucophaeus
ENSRNOG00000012771Ddx419886.601ENSMAMG00000011237DDX4110085.370Mastacembelus_armatus
ENSRNOG00000012771Ddx419787.336ENSMZEG00005009983DDX419688.644Maylandia_zebra
ENSRNOG00000012771Ddx419992.718ENSMGAG00000004050DDX419992.718Meleagris_gallopavo
ENSRNOG00000012771Ddx4110099.196ENSMAUG00000008134Ddx4110099.196Mesocricetus_auratus
ENSRNOG00000012771Ddx4110098.071ENSMICG00000007919DDX4110098.071Microcebus_murinus
ENSRNOG00000012771Ddx4110099.196ENSMOCG00000010015Ddx4110099.196Microtus_ochrogaster
ENSRNOG00000012771Ddx4110085.691ENSMMOG00000009039DDX4110085.531Mola_mola
ENSRNOG00000012771Ddx419397.400ENSMODG00000004714DDX4110097.400Monodelphis_domestica
ENSRNOG00000012771Ddx419588.663ENSMALG00000003224DDX419988.644Monopterus_albus
ENSRNOG00000012771Ddx4110099.357MGP_CAROLIEiJ_G0018568Ddx4110099.357Mus_caroli
ENSRNOG00000012771Ddx4110099.196ENSMUSG00000021494Ddx4110099.196Mus_musculus
ENSRNOG00000012771Ddx4110099.357MGP_PahariEiJ_G0019633Ddx4110099.357Mus_pahari
ENSRNOG00000012771Ddx4110099.196MGP_SPRETEiJ_G0019448Ddx4110099.196Mus_spretus
ENSRNOG00000012771Ddx4110099.035ENSMPUG00000012792DDX4110099.035Mustela_putorius_furo
ENSRNOG00000012771Ddx4110098.232ENSMLUG00000006610DDX4110098.232Myotis_lucifugus
ENSRNOG00000012771Ddx4110099.035ENSNGAG00000022111Ddx4110099.035Nannospalax_galili
ENSRNOG00000012771Ddx419787.007ENSNBRG00000015087DDX419688.305Neolamprologus_brichardi
ENSRNOG00000012771Ddx4110085.048ENSNLEG00000012844DDX4110085.048Nomascus_leucogenys
ENSRNOG00000012771Ddx419993.559ENSMEUG00000014375DDX4110093.559Notamacropus_eugenii
ENSRNOG00000012771Ddx418197.206ENSOPRG00000016604DDX418197.206Ochotona_princeps
ENSRNOG00000012771Ddx4110098.553ENSODEG00000008505DDX4110098.553Octodon_degus
ENSRNOG00000012771Ddx419787.049ENSONIG00000017785DDX419688.345Oreochromis_niloticus
ENSRNOG00000012771Ddx419585.500ENSOANG00000009671DDX419585.570Ornithorhynchus_anatinus
ENSRNOG00000012771Ddx418996.733ENSOCUG00000023209DDX419996.733Oryctolagus_cuniculus
ENSRNOG00000012771Ddx419987.154ENSORLG00000006688DDX419987.154Oryzias_latipes
ENSRNOG00000012771Ddx419987.154ENSORLG00020008411DDX419987.154Oryzias_latipes_hni
ENSRNOG00000012771Ddx4110086.174ENSORLG00015004882DDX419986.992Oryzias_latipes_hsok
ENSRNOG00000012771Ddx4110086.334ENSOMEG00000009020DDX4110086.334Oryzias_melastigma
ENSRNOG00000012771Ddx4110098.714ENSOGAG00000011123-10098.714Otolemur_garnettii
ENSRNOG00000012771Ddx418083.669ENSOGAG00000029024-10083.669Otolemur_garnettii
ENSRNOG00000012771Ddx4110098.714ENSOARG00000005568DDX4110098.714Ovis_aries
ENSRNOG00000012771Ddx4110099.035ENSPPAG00000029499DDX4110099.035Pan_paniscus
ENSRNOG00000012771Ddx4110098.714ENSPPRG00000001013DDX4110098.714Panthera_pardus
ENSRNOG00000012771Ddx4110098.714ENSPTIG00000020225DDX4110098.714Panthera_tigris_altaica
ENSRNOG00000012771Ddx4110099.035ENSPTRG00000017589DDX4110099.035Pan_troglodytes
ENSRNOG00000012771Ddx4110098.875ENSPANG00000012013DDX4110098.875Papio_anubis
ENSRNOG00000012771Ddx419588.889ENSPKIG00000007704DDX419588.983Paramormyrops_kingsleyae
ENSRNOG00000012771Ddx418078.400ENSPSIG00000005060DDX419778.279Pelodiscus_sinensis
ENSRNOG00000012771Ddx4110099.196ENSPEMG00000000049Ddx4110099.196Peromyscus_maniculatus_bairdii
ENSRNOG00000012771Ddx4110093.730ENSPCIG00000002296DDX419893.730Phascolarctos_cinereus
ENSRNOG00000012771Ddx419588.384ENSPFOG00000024441DDX419986.623Poecilia_formosa
ENSRNOG00000012771Ddx419588.533ENSPLAG00000011231DDX419986.765Poecilia_latipinna
ENSRNOG00000012771Ddx419588.533ENSPMEG00000003394DDX419986.765Poecilia_mexicana
ENSRNOG00000012771Ddx419787.438ENSPREG00000005321DDX419688.814Poecilia_reticulata
ENSRNOG00000012771Ddx4110095.820ENSPPYG00000016097DDX4110095.820Pongo_abelii
ENSRNOG00000012771Ddx4181100.000ENSPCAG00000009363DDX4181100.000Procavia_capensis
ENSRNOG00000012771Ddx4110098.071ENSPCOG00000023131DDX419898.071Propithecus_coquereli
ENSRNOG00000012771Ddx4110094.534ENSPVAG00000007784DDX4110094.212Pteropus_vampyrus
ENSRNOG00000012771Ddx419787.336ENSPNYG00000000212DDX419688.644Pundamilia_nyererei
ENSRNOG00000012771Ddx419987.480ENSPNAG00000002248DDX419689.322Pygocentrus_nattereri
ENSRNOG00000012771Ddx4110098.714ENSRBIG00000038465DDX419998.714Rhinopithecus_bieti
ENSRNOG00000012771Ddx4110098.875ENSRROG00000035750DDX419998.875Rhinopithecus_roxellana
ENSRNOG00000012771Ddx4110098.875ENSSBOG00000033581DDX4110098.875Saimiri_boliviensis_boliviensis
ENSRNOG00000012771Ddx419993.559ENSSHAG00000014005-9993.559Sarcophilus_harrisii
ENSRNOG00000012771Ddx4110086.013ENSSHAG00000011574-10086.013Sarcophilus_harrisii
ENSRNOG00000012771Ddx419986.753ENSSFOG00015000404ddx419986.753Scleropages_formosus
ENSRNOG00000012771Ddx419985.484ENSSMAG00000007208DDX419985.484Scophthalmus_maximus
ENSRNOG00000012771Ddx418887.432ENSSLDG00000010264DDX418388.290Seriola_lalandi_dorsalis
ENSRNOG00000012771Ddx418092.857ENSSARG00000003609DDX418092.857Sorex_araneus
ENSRNOG00000012771Ddx419992.822ENSSPUG00000005794DDX419992.659Sphenodon_punctatus
ENSRNOG00000012771Ddx419788.519ENSSPAG00000018675DDX419986.992Stegastes_partitus
ENSRNOG00000012771Ddx4110099.196ENSSSCG00000032642DDX4110099.196Sus_scrofa
ENSRNOG00000012771Ddx419791.584ENSTGUG00000000413DDX419694.473Taeniopygia_guttata
ENSRNOG00000012771Ddx4110085.233ENSTRUG00000004445DDX4110084.912Takifugu_rubripes
ENSRNOG00000012771Ddx419188.380ENSTNIG00000008991DDX4110088.380Tetraodon_nigroviridis
ENSRNOG00000012771Ddx417299.677ENSTBEG00000002862DDX417299.677Tupaia_belangeri
ENSRNOG00000012771Ddx418098.200ENSTTRG00000015836DDX4110098.200Tursiops_truncatus
ENSRNOG00000012771Ddx4110097.156ENSUAMG00000023036DDX4110099.664Ursus_americanus
ENSRNOG00000012771Ddx4110099.035ENSUMAG00000024285DDX4110099.035Ursus_maritimus
ENSRNOG00000012771Ddx4110094.607ENSVVUG00000026020DDX4110094.607Vulpes_vulpes
ENSRNOG00000012771Ddx419989.050ENSXETG00000033518DDX419988.548Xenopus_tropicalis
ENSRNOG00000012771Ddx4110086.013ENSXMAG00000009768DDX4110086.013Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome-IEAProcess
GO:0000398mRNA splicing, via spliceosome-ISOProcess
GO:0003677DNA binding-IEAFunction
GO:0003677DNA binding-ISOFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-ISOComponent
GO:0005681spliceosomal complex-ISOComponent
GO:0005783endoplasmic reticulum-IEAComponent
GO:0005783endoplasmic reticulum-ISOComponent
GO:0008283cell proliferation-IEAProcess
GO:0008283cell proliferation-ISOProcess
GO:0030154cell differentiation-IEAProcess
GO:0030154cell differentiation-ISOProcess
GO:0035458cellular response to interferon-beta-IEAProcess
GO:0035458cellular response to interferon-beta-ISOProcess
GO:0045944positive regulation of transcription by RNA polymerase II-IEAProcess
GO:0045944positive regulation of transcription by RNA polymerase II-ISOProcess
GO:0051607defense response to virus-IEAProcess
GO:0051607defense response to virus-ISOProcess
GO:0071013catalytic step 2 spliceosome-IEAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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