EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000012864 (Gene tree)
Gene ID
498013
Gene Symbol
Ern1
Alias
LOC498013|RGD1559716
Full Name
endoplasmic reticulum to nucleus signaling 1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
93360 bases
Position
chr10:94588555-94681914
Accession
1559716
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000017371Ribonuc_2-5APF06479.122e-4011
ENSRNOP00000072244Ribonuc_2-5APF06479.122e-4011
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000085736-6892XM_006247633ENSRNOP00000072244977 (aa)XP_006247696A0A0G2K2H4
ENSRNOT00000017371-2954-ENSRNOP00000017371965 (aa)-F1LSY7
Gene Model
Click here to download ENSRNOG00000012864's gene model file
Pathways
Pathway IDPathway NameSource
rno04140Autophagy - animalKEGG
rno04141Protein processing in endoplasmic reticulumKEGG
rno04210ApoptosisKEGG
rno04932Non-alcoholic fatty liver disease (NAFLD)KEGG
rno05010Alzheimer diseaseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012864's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000012864Ern19993.319ENSG00000178607ERN19993.250Homo_sapiens
ENSRNOG00000012864Ern19893.206ENSAMEG00000002855ERN19793.206Ailuropoda_melanoleuca
ENSRNOG00000012864Ern19782.234ENSAPLG00000007775ERN19981.388Anas_platyrhynchos
ENSRNOG00000012864Ern19978.325ENSACAG00000016707ERN19777.778Anolis_carolinensis
ENSRNOG00000012864Ern19993.382ENSANAG00000019640ERN19893.096Aotus_nancymaae
ENSRNOG00000012864Ern19993.410ENSBTAG00000016799ERN19893.410Bos_taurus
ENSRNOG00000012864Ern19994.013ENSCJAG00000019415ERN19993.724Callithrix_jacchus
ENSRNOG00000012864Ern19993.229ENSCAFG00000011784ERN19993.515Canis_familiaris
ENSRNOG00000012864Ern19993.326ENSCAFG00020026580ERN19793.515Canis_lupus_dingo
ENSRNOG00000012864Ern19993.201ENSCHIG00000025852ERN110093.201Capra_hircus
ENSRNOG00000012864Ern19986.416ENSTSYG00000029092ERN19986.416Carlito_syrichta
ENSRNOG00000012864Ern19988.912ENSCAPG00000011651ERN19888.912Cavia_aperea
ENSRNOG00000012864Ern19993.724ENSCPOG00000000570ERN19993.652Cavia_porcellus
ENSRNOG00000012864Ern19591.930ENSCCAG00000034845ERN110093.342Cebus_capucinus
ENSRNOG00000012864Ern19992.693ENSCATG00000040819ERN19992.627Cercocebus_atys
ENSRNOG00000012864Ern18895.486ENSCLAG00000006912ERN19995.486Chinchilla_lanigera
ENSRNOG00000012864Ern19992.790ENSCSAG00000003990ERN19892.894Chlorocebus_sabaeus
ENSRNOG00000012864Ern19980.063ENSCPBG00000009183ERN19779.728Chrysemys_picta_bellii
ENSRNOG00000012864Ern17059.753ENSCSAVG00000010472-7459.753Ciona_savignyi
ENSRNOG00000012864Ern19992.805ENSCANG00000032329ERN19892.805Colobus_angolensis_palliatus
ENSRNOG00000012864Ern110096.929ENSCGRG00001003211Ern110096.929Cricetulus_griseus_chok1gshd
ENSRNOG00000012864Ern19996.976ENSCGRG00000010036Ern19897.074Cricetulus_griseus_crigri
ENSRNOG00000012864Ern19991.527ENSDNOG00000009467ERN19991.268Dasypus_novemcinctus
ENSRNOG00000012864Ern19884.910ENSETEG00000004162ERN19584.382Echinops_telfairi
ENSRNOG00000012864Ern15466.154ENSEBUG00000003040ERN17266.154Eptatretus_burgeri
ENSRNOG00000012864Ern19992.790ENSEASG00005014413ERN19992.782Equus_asinus_asinus
ENSRNOG00000012864Ern19994.142ENSECAG00000011262ERN19994.069Equus_caballus
ENSRNOG00000012864Ern18790.141ENSEEUG00000006091ERN18290.598Erinaceus_europaeus
ENSRNOG00000012864Ern19993.724ENSFCAG00000003507ERN19993.542Felis_catus
ENSRNOG00000012864Ern19881.693ENSFALG00000002305ERN19781.607Ficedula_albicollis
ENSRNOG00000012864Ern19993.410ENSFDAG00000013825ERN19993.410Fukomys_damarensis
ENSRNOG00000012864Ern19980.556ENSGALG00000003476ERN19881.263Gallus_gallus
ENSRNOG00000012864Ern18378.509ENSGAGG00000006329-9978.137Gopherus_agassizii
ENSRNOG00000012864Ern19993.215ENSGGOG00000006532ERN19993.319Gorilla_gorilla
ENSRNOG00000012864Ern19993.828ENSHGLG00000010207ERN19993.757Heterocephalus_glaber_female
ENSRNOG00000012864Ern19993.619ENSHGLG00100019030ERN19993.619Heterocephalus_glaber_male
ENSRNOG00000012864Ern19994.351ENSSTOG00000009067ERN19894.351Ictidomys_tridecemlineatus
ENSRNOG00000012864Ern19974.504ENSLACG00000016078ERN19974.059Latimeria_chalumnae
ENSRNOG00000012864Ern19875.869ENSLOCG00000013703ERN19775.761Lepisosteus_oculatus
ENSRNOG00000012864Ern19993.089ENSLAFG00000008504ERN110093.089Loxodonta_africana
ENSRNOG00000012864Ern19992.693ENSMFAG00000040147ERN19992.797Macaca_fascicularis
ENSRNOG00000012864Ern19992.693ENSMMUG00000015185ERN19892.797Macaca_mulatta
ENSRNOG00000012864Ern19992.484ENSMNEG00000044337ERN110092.209Macaca_nemestrina
ENSRNOG00000012864Ern19992.797ENSMLEG00000033739ERN19992.902Mandrillus_leucophaeus
ENSRNOG00000012864Ern19981.388ENSMGAG00000007831ERN19881.388Meleagris_gallopavo
ENSRNOG00000012864Ern19893.743ENSMICG00000010050ERN19993.229Microcebus_murinus
ENSRNOG00000012864Ern110095.599ENSMOCG00000003999Ern110094.063Microtus_ochrogaster
ENSRNOG00000012864Ern19980.021ENSMODG00000009349ERN19880.145Monodelphis_domestica
ENSRNOG00000012864Ern110097.646MGP_CAROLIEiJ_G0017324Ern110097.646Mus_caroli
ENSRNOG00000012864Ern110097.441ENSMUSG00000020715Ern110097.441Mus_musculus
ENSRNOG00000012864Ern110097.134MGP_PahariEiJ_G0018454Ern110097.134Mus_pahari
ENSRNOG00000012864Ern110097.646MGP_SPRETEiJ_G0018168Ern110097.646Mus_spretus
ENSRNOG00000012864Ern19993.396ENSMPUG00000014770ERN19893.396Mustela_putorius_furo
ENSRNOG00000012864Ern19992.565ENSMLUG00000016729ERN19892.565Myotis_lucifugus
ENSRNOG00000012864Ern19996.130ENSNGAG00000019135Ern19896.130Nannospalax_galili
ENSRNOG00000012864Ern19993.528ENSNLEG00000015074ERN19993.633Nomascus_leucogenys
ENSRNOG00000012864Ern19182.609ENSMEUG00000008103ERN19082.609Notamacropus_eugenii
ENSRNOG00000012864Ern19991.109ENSOPRG00000008129ERN19991.109Ochotona_princeps
ENSRNOG00000012864Ern19992.782ENSODEG00000007755ERN19992.308Octodon_degus
ENSRNOG00000012864Ern19387.291ENSOANG00000008033ERN19987.291Ornithorhynchus_anatinus
ENSRNOG00000012864Ern19993.222ENSOCUG00000012090ERN110092.733Oryctolagus_cuniculus
ENSRNOG00000012864Ern19293.834ENSOGAG00000003863ERN19993.466Otolemur_garnettii
ENSRNOG00000012864Ern19992.469ENSOARG00000014398ERN19892.469Ovis_aries
ENSRNOG00000012864Ern19993.319ENSPPAG00000031054ERN19993.215Pan_paniscus
ENSRNOG00000012864Ern19993.619ENSPPRG00000009424ERN19993.438Panthera_pardus
ENSRNOG00000012864Ern19993.724ENSPTIG00000000179ERN19893.724Panthera_tigris_altaica
ENSRNOG00000012864Ern19993.215ENSPTRG00000009535ERN19993.319Pan_troglodytes
ENSRNOG00000012864Ern19992.797ENSPANG00000020738ERN19992.902Papio_anubis
ENSRNOG00000012864Ern19878.775ENSPSIG00000017320ERN19978.775Pelodiscus_sinensis
ENSRNOG00000012864Ern110097.236ENSPEMG00000002339Ern110097.236Peromyscus_maniculatus_bairdii
ENSRNOG00000012864Ern19985.089ENSPCIG00000005771ERN19885.151Phascolarctos_cinereus
ENSRNOG00000012864Ern19992.163ENSPPYG00000008539ERN110093.132Pongo_abelii
ENSRNOG00000012864Ern19573.144ENSPCAG00000016275ERN110073.144Procavia_capensis
ENSRNOG00000012864Ern19494.020ENSPCOG00000023564ERN19893.661Propithecus_coquereli
ENSRNOG00000012864Ern19990.377ENSPVAG00000000484ERN19990.208Pteropus_vampyrus
ENSRNOG00000012864Ern19992.589ENSRBIG00000033096ERN19892.693Rhinopithecus_bieti
ENSRNOG00000012864Ern19992.508ENSRROG00000017577ERN110092.442Rhinopithecus_roxellana
ENSRNOG00000012864Ern19991.571ENSSBOG00000035494ERN110094.056Saimiri_boliviensis_boliviensis
ENSRNOG00000012864Ern19684.416ENSSHAG00000014118ERN110084.416Sarcophilus_harrisii
ENSRNOG00000012864Ern19973.845ENSSFOG00015005661ern19673.061Scleropages_formosus
ENSRNOG00000012864Ern19978.161ENSSPUG00000004797ERN19978.161Sphenodon_punctatus
ENSRNOG00000012864Ern19992.364ENSSSCG00000017279ERN19992.300Sus_scrofa
ENSRNOG00000012864Ern19881.953ENSTGUG00000004752-9981.953Taeniopygia_guttata
ENSRNOG00000012864Ern19987.604ENSTTRG00000007006ERN19987.879Tursiops_truncatus
ENSRNOG00000012864Ern19891.781ENSUAMG00000007437ERN19892.122Ursus_americanus
ENSRNOG00000012864Ern19992.639ENSUMAG00000017551ERN19892.332Ursus_maritimus
ENSRNOG00000012864Ern19893.975ENSVVUG00000006214ERN19793.326Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000287magnesium ion binding-IEAFunction
GO:0000287magnesium ion binding-ISOFunction
GO:0001935endothelial cell proliferation-IEAProcess
GO:0001935endothelial cell proliferation-ISOProcess
GO:0003674molecular_function-NDFunction
GO:0004519endonuclease activity-ISOFunction
GO:0004521endoribonuclease activity21873635.IBAFunction
GO:0004521endoribonuclease activity-ISOFunction
GO:0004672protein kinase activity21873635.IBAFunction
GO:0004674protein serine/threonine kinase activity21873635.IBAFunction
GO:0004674protein serine/threonine kinase activity-ISOFunction
GO:0005161platelet-derived growth factor receptor binding-IEAFunction
GO:0005161platelet-derived growth factor receptor binding-ISOFunction
GO:0005515protein binding10650002.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005524ATP binding-ISOFunction
GO:0005575cellular_component-NDComponent
GO:0005637nuclear inner membrane-IEAComponent
GO:0005637nuclear inner membrane-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0005739mitochondrion-IEAComponent
GO:0005739mitochondrion-ISOComponent
GO:0005783endoplasmic reticulum-ISOComponent
GO:0005789endoplasmic reticulum membrane21873635.IBAComponent
GO:0005789endoplasmic reticulum membrane-ISOComponent
GO:0006379mRNA cleavage-ISOProcess
GO:0006397mRNA processing-IEAProcess
GO:0006468protein phosphorylation-IEAProcess
GO:0006468protein phosphorylation-ISOProcess
GO:0007050cell cycle arrest-IEAProcess
GO:0007050cell cycle arrest-ISOProcess
GO:0007257activation of JUN kinase activity-IEAProcess
GO:0007257activation of JUN kinase activity-ISOProcess
GO:0008150biological_process-NDProcess
GO:0016021integral component of membrane-IEAComponent
GO:0019899enzyme binding-IEAFunction
GO:0019899enzyme binding-ISOFunction
GO:0030176integral component of endoplasmic reticulum membrane-IEAComponent
GO:0030176integral component of endoplasmic reticulum membrane-ISOComponent
GO:0030544Hsp70 protein binding-IEAFunction
GO:0030544Hsp70 protein binding-ISOFunction
GO:0030968endoplasmic reticulum unfolded protein response21873635.IBAProcess
GO:0030968endoplasmic reticulum unfolded protein response-ISOProcess
GO:0033120positive regulation of RNA splicing-IEAProcess
GO:0033120positive regulation of RNA splicing-ISOProcess
GO:0034620cellular response to unfolded protein-ISOProcess
GO:0034976response to endoplasmic reticulum stress-ISOProcess
GO:0035924cellular response to vascular endothelial growth factor stimulus-IEAProcess
GO:0035924cellular response to vascular endothelial growth factor stimulus-ISOProcess
GO:0036289peptidyl-serine autophosphorylation-ISOProcess
GO:0036498IRE1-mediated unfolded protein response21873635.IBAProcess
GO:0036498IRE1-mediated unfolded protein response-ISOProcess
GO:0042802identical protein binding-ISOFunction
GO:0042803protein homodimerization activity-IEAFunction
GO:0042803protein homodimerization activity-ISOFunction
GO:0043531ADP binding-IEAFunction
GO:0043531ADP binding-ISOFunction
GO:0046777protein autophosphorylation-ISOProcess
GO:0051082unfolded protein binding21873635.IBAFunction
GO:0051879Hsp90 protein binding12446770.IDAFunction
GO:0051879Hsp90 protein binding-IEAFunction
GO:0051879Hsp90 protein binding-ISOFunction
GO:0070054mRNA splicing, via endonucleolytic cleavage and ligation-IEAProcess
GO:0070054mRNA splicing, via endonucleolytic cleavage and ligation-ISOProcess
GO:0070059intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress21873635.IBAProcess
GO:0070059intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress-ISOProcess
GO:0071287cellular response to manganese ion23934647.IEPProcess
GO:0071333cellular response to glucose stimulus-IEAProcess
GO:0071333cellular response to glucose stimulus-ISOProcess
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic-IEAProcess
GO:0098787mRNA cleavage involved in mRNA processing-IEAProcess
GO:0098787mRNA cleavage involved in mRNA processing-ISOProcess
GO:1900103positive regulation of endoplasmic reticulum unfolded protein response-IEAProcess
GO:1900103positive regulation of endoplasmic reticulum unfolded protein response-ISOProcess
GO:1901142insulin metabolic process-IEAProcess
GO:1901142insulin metabolic process-ISOProcess
GO:1904707positive regulation of vascular smooth muscle cell proliferation-IEAProcess
GO:1904707positive regulation of vascular smooth muscle cell proliferation-ISOProcess
GO:1990579peptidyl-serine trans-autophosphorylation-IEAProcess
GO:1990579peptidyl-serine trans-autophosphorylation-ISOProcess
GO:1990597AIP1-IRE1 complex-IEAComponent
GO:1990597AIP1-IRE1 complex-ISOComponent
GO:1990604IRE1-TRAF2-ASK1 complex21873635.IBAComponent
GO:1990604IRE1-TRAF2-ASK1 complex-ISOComponent
GO:1990630IRE1-RACK1-PP2A complex-IEAComponent
GO:1990630IRE1-RACK1-PP2A complex-ISOComponent

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