EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012873 (Gene tree)
Gene ID: 114017
Gene Symbol: Gfm1
Alias: EF-G|EF-Gmt|Efg|Gfm|MGC93294|mEF-G 1
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 44854 bases
Position: chr2:164601586-164646439
Accession: 631396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000040081	GTP_EFTU	PF00009.27	1.5e-62	1	1
ENSRNOP00000017608	GTP_EFTU	PF00009.27	1.5e-62	1	1
ENSRNOP00000040081	GTP_EFTU_D2	PF03144.25	4.9e-17	1	1
ENSRNOP00000017608	GTP_EFTU_D2	PF03144.25	5.4e-17	1	1
ENSRNOP00000040081	EFG_IV	PF03764.18	7.6e-34	1	1
ENSRNOP00000017608	EFG_IV	PF03764.18	5.9e-23	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000042079	-	2560	-	ENSRNOP00000040081	751 (aa)	-	Q07803
ENSRNOT00000017608	-	2247	-	ENSRNOP00000017608	749 (aa)	-	F1LMM9

Gene Model

Click here to download ENSRNOG00000012873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000012873	Gfm1	74	38.926	ENSRNOG00000020266	Eef2	75	38.926
ENSRNOG00000012873	Gfm1	92	33.379	ENSRNOG00000025285	Gfm2	91	33.791
ENSRNOG00000012873	Gfm1	55	32.212	ENSRNOG00000002207	Guf1	64	32.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012873	Gfm1	98	91.440	ENSG00000168827	GFM1	100	98.333	Homo_sapiens
ENSRNOG00000012873	Gfm1	90	78.963	ENSAPOG00000016489	gfm1	96	79.880	Acanthochromis_polyacanthus
ENSRNOG00000012873	Gfm1	98	92.152	ENSAMEG00000013542	GFM1	100	91.512	Ailuropoda_melanoleuca
ENSRNOG00000012873	Gfm1	95	76.462	ENSACIG00000014465	gfm1	93	76.462	Amphilophus_citrinellus
ENSRNOG00000012873	Gfm1	96	79.861	ENSAOCG00000006023	gfm1	96	79.861	Amphiprion_ocellaris
ENSRNOG00000012873	Gfm1	96	79.861	ENSAPEG00000024499	gfm1	99	79.888	Amphiprion_percula
ENSRNOG00000012873	Gfm1	100	78.562	ENSATEG00000013789	gfm1	100	78.562	Anabas_testudineus
ENSRNOG00000012873	Gfm1	95	83.287	ENSAPLG00000005022	GFM1	99	83.287	Anas_platyrhynchos
ENSRNOG00000012873	Gfm1	97	83.609	ENSACAG00000006829	GFM1	98	83.609	Anolis_carolinensis
ENSRNOG00000012873	Gfm1	100	90.716	ENSANAG00000035983	GFM1	100	90.716	Aotus_nancymaae
ENSRNOG00000012873	Gfm1	95	82.427	ENSACLG00000016586	gfm1	98	80.972	Astatotilapia_calliptera
ENSRNOG00000012873	Gfm1	100	78.961	ENSAMXG00000013435	gfm1	98	80.352	Astyanax_mexicanus
ENSRNOG00000012873	Gfm1	100	92.829	ENSBTAG00000027795	GFM1	100	92.829	Bos_taurus
ENSRNOG00000012873	Gfm1	97	55.163	WBGene00009246	gfm-1	99	55.020	Caenorhabditis_elegans
ENSRNOG00000012873	Gfm1	100	91.223	ENSCJAG00000000363	GFM1	100	91.223	Callithrix_jacchus
ENSRNOG00000012873	Gfm1	98	92.818	ENSCAFG00000009006	GFM1	100	94.083	Canis_familiaris
ENSRNOG00000012873	Gfm1	98	93.099	ENSCAFG00020005878	GFM1	99	93.785	Canis_lupus_dingo
ENSRNOG00000012873	Gfm1	100	92.829	ENSCHIG00000015220	GFM1	100	92.829	Capra_hircus
ENSRNOG00000012873	Gfm1	100	91.368	ENSTSYG00000002013	GFM1	100	91.368	Carlito_syrichta
ENSRNOG00000012873	Gfm1	96	81.405	ENSCAPG00000005699	GFM1	98	81.405	Cavia_aperea
ENSRNOG00000012873	Gfm1	100	91.379	ENSCPOG00000001194	GFM1	100	91.379	Cavia_porcellus
ENSRNOG00000012873	Gfm1	100	90.981	ENSCCAG00000025561	GFM1	100	90.981	Cebus_capucinus
ENSRNOG00000012873	Gfm1	100	90.451	ENSCATG00000037622	GFM1	100	90.451	Cercocebus_atys
ENSRNOG00000012873	Gfm1	98	91.622	ENSCLAG00000002503	GFM1	99	91.141	Chinchilla_lanigera
ENSRNOG00000012873	Gfm1	100	90.318	ENSCSAG00000012162	GFM1	100	90.318	Chlorocebus_sabaeus
ENSRNOG00000012873	Gfm1	100	83.156	ENSCHOG00000004867	GFM1	100	83.156	Choloepus_hoffmanni
ENSRNOG00000012873	Gfm1	100	82.024	ENSCPBG00000018367	GFM1	99	82.024	Chrysemys_picta_bellii
ENSRNOG00000012873	Gfm1	95	59.198	ENSCING00000011960	-	94	59.198	Ciona_intestinalis
ENSRNOG00000012873	Gfm1	95	60.194	ENSCSAVG00000008514	-	99	60.194	Ciona_savignyi
ENSRNOG00000012873	Gfm1	98	91.576	ENSCANG00000031714	GFM1	100	90.584	Colobus_angolensis_palliatus
ENSRNOG00000012873	Gfm1	100	94.807	ENSCGRG00001022095	GFM1	100	94.807	Cricetulus_griseus_chok1gshd
ENSRNOG00000012873	Gfm1	100	94.807	ENSCGRG00000012043	GFM1	100	94.807	Cricetulus_griseus_crigri
ENSRNOG00000012873	Gfm1	95	76.290	ENSCSEG00000017088	gfm1	98	76.290	Cynoglossus_semilaevis
ENSRNOG00000012873	Gfm1	96	82.639	ENSCVAG00000004126	gfm1	99	81.690	Cyprinodon_variegatus
ENSRNOG00000012873	Gfm1	100	77.364	ENSDARG00000063624	gfm1	100	77.364	Danio_rerio
ENSRNOG00000012873	Gfm1	54	89.487	ENSDNOG00000016385	-	100	89.487	Dasypus_novemcinctus
ENSRNOG00000012873	Gfm1	100	89.894	ENSDORG00000014165	Gfm1	100	89.894	Dipodomys_ordii
ENSRNOG00000012873	Gfm1	94	67.419	FBgn0263133	mEFG1	95	67.419	Drosophila_melanogaster
ENSRNOG00000012873	Gfm1	98	81.646	ENSETEG00000019197	GFM1	100	81.085	Echinops_telfairi
ENSRNOG00000012873	Gfm1	90	67.111	ENSEBUG00000012794	gfm1	99	67.111	Eptatretus_burgeri
ENSRNOG00000012873	Gfm1	87	78.528	ENSEEUG00000000429	GFM1	91	78.528	Erinaceus_europaeus
ENSRNOG00000012873	Gfm1	100	77.364	ENSELUG00000014728	gfm1	100	77.364	Esox_lucius
ENSRNOG00000012873	Gfm1	98	93.234	ENSFCAG00000013291	GFM1	100	92.573	Felis_catus
ENSRNOG00000012873	Gfm1	90	83.704	ENSFALG00000007619	GFM1	100	83.704	Ficedula_albicollis
ENSRNOG00000012873	Gfm1	100	91.114	ENSFDAG00000016559	GFM1	100	91.114	Fukomys_damarensis
ENSRNOG00000012873	Gfm1	97	80.690	ENSFHEG00000006091	gfm1	97	80.690	Fundulus_heteroclitus
ENSRNOG00000012873	Gfm1	95	79.334	ENSGMOG00000010161	gfm1	99	79.334	Gadus_morhua
ENSRNOG00000012873	Gfm1	98	81.275	ENSGALG00000009634	GFM1	99	81.275	Gallus_gallus
ENSRNOG00000012873	Gfm1	97	81.379	ENSGAFG00000012527	gfm1	97	81.379	Gambusia_affinis
ENSRNOG00000012873	Gfm1	99	77.660	ENSGACG00000009864	gfm1	99	77.660	Gasterosteus_aculeatus
ENSRNOG00000012873	Gfm1	98	91.712	ENSGGOG00000003085	GFM1	100	90.716	Gorilla_gorilla
ENSRNOG00000012873	Gfm1	95	82.427	ENSHBUG00000002120	gfm1	96	82.427	Haplochromis_burtoni
ENSRNOG00000012873	Gfm1	98	91.746	ENSHGLG00000016855	GFM1	100	90.584	Heterocephalus_glaber_female
ENSRNOG00000012873	Gfm1	98	91.746	ENSHGLG00100013049	GFM1	100	90.584	Heterocephalus_glaber_male
ENSRNOG00000012873	Gfm1	95	81.320	ENSHCOG00000007638	gfm1	97	81.421	Hippocampus_comes
ENSRNOG00000012873	Gfm1	97	80.414	ENSIPUG00000005873	gfm1	100	78.695	Ictalurus_punctatus
ENSRNOG00000012873	Gfm1	98	90.379	ENSSTOG00000010150	GFM1	99	90.379	Ictidomys_tridecemlineatus
ENSRNOG00000012873	Gfm1	100	91.212	ENSJJAG00000016447	Gfm1	100	91.212	Jaculus_jaculus
ENSRNOG00000012873	Gfm1	97	78.621	ENSKMAG00000020768	gfm1	97	78.621	Kryptolebias_marmoratus
ENSRNOG00000012873	Gfm1	93	80.599	ENSLBEG00000021315	gfm1	100	80.599	Labrus_bergylta
ENSRNOG00000012873	Gfm1	100	78.968	ENSLACG00000012295	GFM1	100	78.968	Latimeria_chalumnae
ENSRNOG00000012873	Gfm1	96	75.862	ENSLOCG00000003778	gfm1	99	75.862	Lepisosteus_oculatus
ENSRNOG00000012873	Gfm1	99	88.329	ENSLAFG00000010945	GFM1	100	88.690	Loxodonta_africana
ENSRNOG00000012873	Gfm1	100	90.716	ENSMFAG00000035731	GFM1	100	90.716	Macaca_fascicularis
ENSRNOG00000012873	Gfm1	100	90.849	ENSMMUG00000004961	GFM1	100	90.849	Macaca_mulatta
ENSRNOG00000012873	Gfm1	100	90.584	ENSMNEG00000033245	GFM1	100	90.584	Macaca_nemestrina
ENSRNOG00000012873	Gfm1	96	89.931	ENSMLEG00000030908	GFM1	100	89.637	Mandrillus_leucophaeus
ENSRNOG00000012873	Gfm1	95	81.869	ENSMAMG00000011760	gfm1	96	81.869	Mastacembelus_armatus
ENSRNOG00000012873	Gfm1	95	82.427	ENSMZEG00005016639	gfm1	96	82.427	Maylandia_zebra
ENSRNOG00000012873	Gfm1	95	82.985	ENSMGAG00000010641	GFM1	96	82.985	Meleagris_gallopavo
ENSRNOG00000012873	Gfm1	100	94.807	ENSMAUG00000000611	Gfm1	100	94.807	Mesocricetus_auratus
ENSRNOG00000012873	Gfm1	98	92.120	ENSMICG00000049086	GFM1	100	91.114	Microcebus_murinus
ENSRNOG00000012873	Gfm1	100	94.407	ENSMOCG00000000465	Gfm1	100	94.407	Microtus_ochrogaster
ENSRNOG00000012873	Gfm1	95	80.195	ENSMMOG00000012538	gfm1	97	80.195	Mola_mola
ENSRNOG00000012873	Gfm1	100	85.486	ENSMODG00000015673	GFM1	100	85.486	Monodelphis_domestica
ENSRNOG00000012873	Gfm1	95	81.032	ENSMALG00000012508	gfm1	95	81.032	Monopterus_albus
ENSRNOG00000012873	Gfm1	100	95.206	MGP_CAROLIEiJ_G0025052	Gfm1	100	95.206	Mus_caroli
ENSRNOG00000012873	Gfm1	100	95.606	ENSMUSG00000027774	Gfm1	100	95.606	Mus_musculus
ENSRNOG00000012873	Gfm1	100	95.606	MGP_PahariEiJ_G0026495	Gfm1	100	95.606	Mus_pahari
ENSRNOG00000012873	Gfm1	100	95.606	MGP_SPRETEiJ_G0025994	Gfm1	100	95.606	Mus_spretus
ENSRNOG00000012873	Gfm1	100	91.247	ENSMPUG00000002859	GFM1	100	91.247	Mustela_putorius_furo
ENSRNOG00000012873	Gfm1	100	91.645	ENSMLUG00000000452	GFM1	100	91.645	Myotis_lucifugus
ENSRNOG00000012873	Gfm1	100	92.943	ENSNGAG00000012375	Gfm1	100	92.943	Nannospalax_galili
ENSRNOG00000012873	Gfm1	95	82.148	ENSNBRG00000004631	gfm1	98	82.148	Neolamprologus_brichardi
ENSRNOG00000012873	Gfm1	98	91.712	ENSNLEG00000004176	GFM1	100	90.716	Nomascus_leucogenys
ENSRNOG00000012873	Gfm1	91	78.184	ENSMEUG00000007784	GFM1	99	78.184	Notamacropus_eugenii
ENSRNOG00000012873	Gfm1	100	88.963	ENSOPRG00000009860	GFM1	100	88.963	Ochotona_princeps
ENSRNOG00000012873	Gfm1	98	92.152	ENSODEG00000004316	GFM1	100	90.981	Octodon_degus
ENSRNOG00000012873	Gfm1	97	81.655	ENSONIG00000003772	gfm1	97	81.655	Oreochromis_niloticus
ENSRNOG00000012873	Gfm1	98	93.505	ENSOCUG00000013561	GFM1	100	92.706	Oryctolagus_cuniculus
ENSRNOG00000012873	Gfm1	94	81.497	ENSORLG00000006487	gfm1	100	81.497	Oryzias_latipes
ENSRNOG00000012873	Gfm1	97	80.414	ENSORLG00020003362	gfm1	97	80.414	Oryzias_latipes_hni
ENSRNOG00000012873	Gfm1	99	78.238	ENSORLG00015005829	gfm1	100	78.238	Oryzias_latipes_hsok
ENSRNOG00000012873	Gfm1	97	80.966	ENSOMEG00000012894	gfm1	97	80.966	Oryzias_melastigma
ENSRNOG00000012873	Gfm1	100	90.716	ENSOGAG00000008298	GFM1	100	90.716	Otolemur_garnettii
ENSRNOG00000012873	Gfm1	96	92.847	ENSOARG00000002409	GFM1	100	92.847	Ovis_aries
ENSRNOG00000012873	Gfm1	98	91.712	ENSPPAG00000033881	GFM1	100	90.716	Pan_paniscus
ENSRNOG00000012873	Gfm1	98	93.234	ENSPPRG00000009281	GFM1	100	92.573	Panthera_pardus
ENSRNOG00000012873	Gfm1	98	93.099	ENSPTIG00000012416	GFM1	100	92.440	Panthera_tigris_altaica
ENSRNOG00000012873	Gfm1	98	91.712	ENSPTRG00000015570	GFM1	100	90.716	Pan_troglodytes
ENSRNOG00000012873	Gfm1	100	90.849	ENSPANG00000016512	GFM1	100	90.849	Papio_anubis
ENSRNOG00000012873	Gfm1	100	79.095	ENSPKIG00000004876	gfm1	100	79.095	Paramormyrops_kingsleyae
ENSRNOG00000012873	Gfm1	100	81.625	ENSPSIG00000012567	GFM1	99	81.625	Pelodiscus_sinensis
ENSRNOG00000012873	Gfm1	95	79.138	ENSPMGG00000014068	gfm1	99	79.138	Periophthalmus_magnuspinnatus
ENSRNOG00000012873	Gfm1	100	94.674	ENSPEMG00000008942	Gfm1	100	94.674	Peromyscus_maniculatus_bairdii
ENSRNOG00000012873	Gfm1	85	85.893	ENSPCIG00000020195	GFM1	98	85.893	Phascolarctos_cinereus
ENSRNOG00000012873	Gfm1	97	81.793	ENSPFOG00000011022	gfm1	97	81.793	Poecilia_formosa
ENSRNOG00000012873	Gfm1	95	82.287	ENSPLAG00000019585	gfm1	97	80.987	Poecilia_latipinna
ENSRNOG00000012873	Gfm1	97	81.655	ENSPMEG00000012376	gfm1	97	81.655	Poecilia_mexicana
ENSRNOG00000012873	Gfm1	97	81.241	ENSPREG00000001332	gfm1	92	81.241	Poecilia_reticulata
ENSRNOG00000012873	Gfm1	98	91.984	ENSPPYG00000014244	GFM1	100	90.981	Pongo_abelii
ENSRNOG00000012873	Gfm1	93	88.193	ENSPCAG00000008934	GFM1	100	88.193	Procavia_capensis
ENSRNOG00000012873	Gfm1	98	92.391	ENSPCOG00000022259	GFM1	100	91.512	Propithecus_coquereli
ENSRNOG00000012873	Gfm1	99	92.598	ENSPVAG00000013605	GFM1	100	91.777	Pteropus_vampyrus
ENSRNOG00000012873	Gfm1	97	80.217	ENSPNYG00000006037	gfm1	100	80.217	Pundamilia_nyererei
ENSRNOG00000012873	Gfm1	100	78.961	ENSPNAG00000001237	gfm1	100	78.961	Pygocentrus_nattereri
ENSRNOG00000012873	Gfm1	98	91.440	ENSRBIG00000031363	GFM1	100	90.451	Rhinopithecus_bieti
ENSRNOG00000012873	Gfm1	98	91.576	ENSRROG00000031081	GFM1	100	90.584	Rhinopithecus_roxellana
ENSRNOG00000012873	Gfm1	92	56.835	YLR069C	-	90	56.835	Saccharomyces_cerevisiae
ENSRNOG00000012873	Gfm1	100	91.512	ENSSBOG00000023252	GFM1	100	91.512	Saimiri_boliviensis_boliviensis
ENSRNOG00000012873	Gfm1	99	86.775	ENSSHAG00000017772	GFM1	99	86.775	Sarcophilus_harrisii
ENSRNOG00000012873	Gfm1	100	79.095	ENSSFOG00015003117	gfm1	99	80.690	Scleropages_formosus
ENSRNOG00000012873	Gfm1	100	77.097	ENSSMAG00000013221	gfm1	99	77.097	Scophthalmus_maximus
ENSRNOG00000012873	Gfm1	99	79.082	ENSSDUG00000018665	gfm1	97	80.000	Seriola_dumerili
ENSRNOG00000012873	Gfm1	99	78.976	ENSSLDG00000020606	gfm1	97	80.000	Seriola_lalandi_dorsalis
ENSRNOG00000012873	Gfm1	95	81.729	ENSSPUG00000018686	GFM1	97	81.729	Sphenodon_punctatus
ENSRNOG00000012873	Gfm1	97	80.276	ENSSPAG00000008800	gfm1	97	80.276	Stegastes_partitus
ENSRNOG00000012873	Gfm1	100	91.645	ENSSSCG00000025651	GFM1	100	91.645	Sus_scrofa
ENSRNOG00000012873	Gfm1	100	77.497	ENSTRUG00000009244	gfm1	100	77.497	Takifugu_rubripes
ENSRNOG00000012873	Gfm1	100	78.562	ENSTNIG00000007729	gfm1	100	78.562	Tetraodon_nigroviridis
ENSRNOG00000012873	Gfm1	98	76.518	ENSTBEG00000017404	GFM1	100	76.190	Tupaia_belangeri
ENSRNOG00000012873	Gfm1	98	92.141	ENSTTRG00000001735	GFM1	100	90.489	Tursiops_truncatus
ENSRNOG00000012873	Gfm1	98	92.828	ENSUAMG00000026381	GFM1	100	92.175	Ursus_americanus
ENSRNOG00000012873	Gfm1	98	92.828	ENSUMAG00000011268	GFM1	100	92.175	Ursus_maritimus
ENSRNOG00000012873	Gfm1	100	88.845	ENSVPAG00000009444	GFM1	100	88.845	Vicugna_pacos
ENSRNOG00000012873	Gfm1	99	91.322	ENSVVUG00000020091	GFM1	100	93.639	Vulpes_vulpes
ENSRNOG00000012873	Gfm1	100	81.915	ENSXETG00000032551	GFM1	100	81.915	Xenopus_tropicalis
ENSRNOG00000012873	Gfm1	52	80.051	ENSXCOG00000012590	gfm1	90	80.051	Xiphophorus_couchianus
ENSRNOG00000012873	Gfm1	97	81.379	ENSXMAG00000000261	gfm1	97	81.379	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	IEA	Function
GO:0003746	translation elongation factor activity	-	ISO	Function
GO:0003746	translation elongation factor activity	-	ISS	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0003924	GTPase activity	-	ISO	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0070125	mitochondrial translational elongation	21873635.	IBA	Process
GO:0070125	mitochondrial translational elongation	-	IEA	Process
GO:0070125	mitochondrial translational elongation	-	ISO	Process
GO:0070125	mitochondrial translational elongation	-	ISS	Process