EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000013023 (Gene tree)
Gene ID: 292624
Gene Symbol: Nop53
Alias: Gltscr2|LOC292624
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 7994 bases
Position: chr1:77836196-77844189
Accession: 1303085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000017556	Nop53	PF07767.11	2.8e-102	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000017555	-	1705	-	ENSRNOP00000017556	482 (aa)	-	Q6QLN3

Gene Model

Click here to download ENSRNOG00000013023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013023	Nop53	100	81.120	ENSG00000105373	NOP53	99	96.296	Homo_sapiens
ENSRNOG00000013023	Nop53	88	46.948	ENSAPOG00000006446	nop53	96	46.320	Acanthochromis_polyacanthus
ENSRNOG00000013023	Nop53	99	75.051	ENSAMEG00000015214	NOP53	100	75.051	Ailuropoda_melanoleuca
ENSRNOG00000013023	Nop53	74	45.278	ENSACIG00000002467	nop53	98	47.500	Amphilophus_citrinellus
ENSRNOG00000013023	Nop53	88	47.406	ENSAOCG00000007002	nop53	89	48.349	Amphiprion_ocellaris
ENSRNOG00000013023	Nop53	88	47.294	ENSAPEG00000024564	nop53	89	48.235	Amphiprion_percula
ENSRNOG00000013023	Nop53	84	46.875	ENSATEG00000021860	nop53	96	45.676	Anabas_testudineus
ENSRNOG00000013023	Nop53	61	58.000	ENSACAG00000011362	-	100	58.000	Anolis_carolinensis
ENSRNOG00000013023	Nop53	96	73.434	ENSANAG00000007933	NOP53	100	73.434	Aotus_nancymaae
ENSRNOG00000013023	Nop53	88	48.028	ENSACLG00000011832	nop53	96	47.021	Astatotilapia_calliptera
ENSRNOG00000013023	Nop53	88	48.941	ENSAMXG00000014883	nop53	89	49.184	Astyanax_mexicanus
ENSRNOG00000013023	Nop53	100	79.132	ENSBTAG00000021192	NOP53	91	79.132	Bos_taurus
ENSRNOG00000013023	Nop53	100	80.453	ENSCJAG00000011385	NOP53	100	80.658	Callithrix_jacchus
ENSRNOG00000013023	Nop53	99	79.794	ENSCAFG00000004080	NOP53	100	79.713	Canis_familiaris
ENSRNOG00000013023	Nop53	99	79.710	ENSCHIG00000009393	NOP53	100	79.710	Capra_hircus
ENSRNOG00000013023	Nop53	98	71.702	ENSTSYG00000036631	NOP53	99	71.190	Carlito_syrichta
ENSRNOG00000013023	Nop53	83	80.750	ENSCAPG00000013148	NOP53	100	80.750	Cavia_aperea
ENSRNOG00000013023	Nop53	99	80.833	ENSCPOG00000015665	NOP53	99	80.833	Cavia_porcellus
ENSRNOG00000013023	Nop53	100	81.120	ENSCCAG00000025477	NOP53	100	81.120	Cebus_capucinus
ENSRNOG00000013023	Nop53	100	81.743	ENSCATG00000032842	NOP53	100	81.743	Cercocebus_atys
ENSRNOG00000013023	Nop53	100	80.331	ENSCLAG00000001860	NOP53	100	80.331	Chinchilla_lanigera
ENSRNOG00000013023	Nop53	100	81.535	ENSCSAG00000002928	NOP53	100	81.535	Chlorocebus_sabaeus
ENSRNOG00000013023	Nop53	84	59.223	ENSCPBG00000009047	NOP53	95	58.981	Chrysemys_picta_bellii
ENSRNOG00000013023	Nop53	87	32.874	ENSCING00000021395	-	94	34.107	Ciona_intestinalis
ENSRNOG00000013023	Nop53	88	35.011	ENSCSAVG00000006009	-	95	34.298	Ciona_savignyi
ENSRNOG00000013023	Nop53	100	75.726	ENSCANG00000039648	NOP53	100	74.896	Colobus_angolensis_palliatus
ENSRNOG00000013023	Nop53	100	89.419	ENSCGRG00001019033	Nop53	100	89.419	Cricetulus_griseus_chok1gshd
ENSRNOG00000013023	Nop53	88	43.864	ENSCSEG00000014834	nop53	89	44.828	Cynoglossus_semilaevis
ENSRNOG00000013023	Nop53	88	47.973	ENSCVAG00000005940	nop53	96	47.689	Cyprinodon_variegatus
ENSRNOG00000013023	Nop53	88	52.336	ENSDARG00000100452	nop53	100	53.927	Danio_rerio
ENSRNOG00000013023	Nop53	97	81.838	ENSDNOG00000005165	NOP53	91	81.743	Dasypus_novemcinctus
ENSRNOG00000013023	Nop53	60	82.759	ENSDORG00000016339	-	100	82.759	Dipodomys_ordii
ENSRNOG00000013023	Nop53	95	42.048	ENSEBUG00000012747	nop53	91	43.578	Eptatretus_burgeri
ENSRNOG00000013023	Nop53	100	79.876	ENSEASG00005004345	NOP53	96	79.876	Equus_asinus_asinus
ENSRNOG00000013023	Nop53	100	80.000	ENSECAG00000026850	NOP53	96	80.000	Equus_caballus
ENSRNOG00000013023	Nop53	100	68.802	ENSEEUG00000005287	NOP53	100	68.802	Erinaceus_europaeus
ENSRNOG00000013023	Nop53	88	50.115	ENSELUG00000001525	nop53	89	50.234	Esox_lucius
ENSRNOG00000013023	Nop53	100	80.453	ENSFCAG00000010861	NOP53	100	80.453	Felis_catus
ENSRNOG00000013023	Nop53	99	66.064	ENSFDAG00000010478	NOP53	100	68.595	Fukomys_damarensis
ENSRNOG00000013023	Nop53	88	49.302	ENSFHEG00000017763	nop53	86	48.956	Fundulus_heteroclitus
ENSRNOG00000013023	Nop53	88	44.706	ENSGMOG00000014299	nop53	88	44.235	Gadus_morhua
ENSRNOG00000013023	Nop53	96	54.545	ENSGALG00000039473	NOP53	77	54.123	Gallus_gallus
ENSRNOG00000013023	Nop53	88	46.925	ENSGAFG00000013301	nop53	87	47.796	Gambusia_affinis
ENSRNOG00000013023	Nop53	88	48.951	ENSGACG00000005766	nop53	88	48.718	Gasterosteus_aculeatus
ENSRNOG00000013023	Nop53	98	71.429	ENSGGOG00000024728	-	100	72.428	Gorilla_gorilla
ENSRNOG00000013023	Nop53	99	78.378	ENSGGOG00000005462	NOP53	100	78.378	Gorilla_gorilla
ENSRNOG00000013023	Nop53	88	48.244	ENSHBUG00000023625	nop53	96	47.210	Haplochromis_burtoni
ENSRNOG00000013023	Nop53	99	79.876	ENSHGLG00000018240	NOP53	100	79.876	Heterocephalus_glaber_female
ENSRNOG00000013023	Nop53	79	88.189	ENSHGLG00100015613	NOP53	100	88.189	Heterocephalus_glaber_male
ENSRNOG00000013023	Nop53	88	44.921	ENSHCOG00000017133	nop53	89	46.065	Hippocampus_comes
ENSRNOG00000013023	Nop53	88	52.246	ENSIPUG00000008154	nop53	78	53.191	Ictalurus_punctatus
ENSRNOG00000013023	Nop53	100	83.610	ENSSTOG00000022092	NOP53	100	83.610	Ictidomys_tridecemlineatus
ENSRNOG00000013023	Nop53	98	83.864	ENSJJAG00000007854	Nop53	100	83.368	Jaculus_jaculus
ENSRNOG00000013023	Nop53	84	46.359	ENSKMAG00000020756	nop53	96	45.233	Kryptolebias_marmoratus
ENSRNOG00000013023	Nop53	88	47.196	ENSLBEG00000011432	nop53	89	47.196	Labrus_bergylta
ENSRNOG00000013023	Nop53	85	50.360	ENSLACG00000018320	NOP53	100	51.220	Latimeria_chalumnae
ENSRNOG00000013023	Nop53	88	52.000	ENSLOCG00000014178	nop53	88	52.235	Lepisosteus_oculatus
ENSRNOG00000013023	Nop53	100	82.158	ENSMFAG00000045103	NOP53	100	82.158	Macaca_fascicularis
ENSRNOG00000013023	Nop53	100	81.950	ENSMMUG00000013348	NOP53	98	96.296	Macaca_mulatta
ENSRNOG00000013023	Nop53	100	81.950	ENSMNEG00000042540	NOP53	96	81.950	Macaca_nemestrina
ENSRNOG00000013023	Nop53	99	70.988	ENSMLEG00000032475	NOP53	100	70.988	Mandrillus_leucophaeus
ENSRNOG00000013023	Nop53	88	48.730	ENSMAMG00000012652	nop53	89	48.961	Mastacembelus_armatus
ENSRNOG00000013023	Nop53	88	45.283	ENSMZEG00005005033	nop53	96	44.924	Maylandia_zebra
ENSRNOG00000013023	Nop53	100	87.967	ENSMAUG00000012617	Nop53	100	87.967	Mesocricetus_auratus
ENSRNOG00000013023	Nop53	91	78.733	ENSMICG00000005580	NOP53	95	78.539	Microcebus_murinus
ENSRNOG00000013023	Nop53	99	90.437	ENSMOCG00000008367	Nop53	100	90.437	Microtus_ochrogaster
ENSRNOG00000013023	Nop53	88	46.588	ENSMMOG00000006515	nop53	88	47.765	Mola_mola
ENSRNOG00000013023	Nop53	99	67.641	ENSMODG00000008721	NOP53	92	68.763	Monodelphis_domestica
ENSRNOG00000013023	Nop53	88	48.941	ENSMALG00000020350	nop53	92	47.174	Monopterus_albus
ENSRNOG00000013023	Nop53	100	92.975	MGP_CAROLIEiJ_G0029218	Nop53	100	92.975	Mus_caroli
ENSRNOG00000013023	Nop53	100	93.182	ENSMUSG00000041560	Nop53	100	93.182	Mus_musculus
ENSRNOG00000013023	Nop53	85	92.718	MGP_PahariEiJ_G0021074	-	100	92.021	Mus_pahari
ENSRNOG00000013023	Nop53	100	92.355	MGP_SPRETEiJ_G0030298	Nop53	100	92.355	Mus_spretus
ENSRNOG00000013023	Nop53	99	79.089	ENSMPUG00000004456	NOP53	99	79.089	Mustela_putorius_furo
ENSRNOG00000013023	Nop53	54	92.913	ENSMLUG00000027066	-	100	80.147	Myotis_lucifugus
ENSRNOG00000013023	Nop53	100	86.570	ENSNGAG00000019894	Nop53	100	86.570	Nannospalax_galili
ENSRNOG00000013023	Nop53	87	42.080	ENSNBRG00000002057	nop53	93	41.991	Neolamprologus_brichardi
ENSRNOG00000013023	Nop53	93	61.693	ENSNLEG00000028326	-	99	61.693	Nomascus_leucogenys
ENSRNOG00000013023	Nop53	100	81.535	ENSNLEG00000003143	NOP53	100	81.535	Nomascus_leucogenys
ENSRNOG00000013023	Nop53	77	59.189	ENSMEUG00000002525	-	100	58.919	Notamacropus_eugenii
ENSRNOG00000013023	Nop53	99	79.626	ENSODEG00000006707	NOP53	100	80.498	Octodon_degus
ENSRNOG00000013023	Nop53	88	48.028	ENSONIG00000016624	nop53	89	48.028	Oreochromis_niloticus
ENSRNOG00000013023	Nop53	88	45.057	ENSORLG00000008659	nop53	96	45.396	Oryzias_latipes
ENSRNOG00000013023	Nop53	88	42.299	ENSORLG00020019916	nop53	93	43.041	Oryzias_latipes_hni
ENSRNOG00000013023	Nop53	88	45.578	ENSORLG00015001315	nop53	96	47.146	Oryzias_latipes_hsok
ENSRNOG00000013023	Nop53	88	48.718	ENSOMEG00000018244	nop53	98	45.912	Oryzias_melastigma
ENSRNOG00000013023	Nop53	99	62.475	ENSOARG00000011414	NOP53	100	62.475	Ovis_aries
ENSRNOG00000013023	Nop53	99	70.165	ENSPPAG00000029337	-	100	69.753	Pan_paniscus
ENSRNOG00000013023	Nop53	100	79.668	ENSPPAG00000002927	-	100	79.668	Pan_paniscus
ENSRNOG00000013023	Nop53	99	69.023	ENSPPAG00000032995	-	100	69.023	Pan_paniscus
ENSRNOG00000013023	Nop53	100	80.041	ENSPPRG00000008954	NOP53	100	80.041	Panthera_pardus
ENSRNOG00000013023	Nop53	100	81.743	ENSPTRG00000011215	NOP53	100	81.743	Pan_troglodytes
ENSRNOG00000013023	Nop53	99	76.923	ENSPTRG00000043520	-	100	76.923	Pan_troglodytes
ENSRNOG00000013023	Nop53	99	70.370	ENSPTRG00000052493	-	100	69.959	Pan_troglodytes
ENSRNOG00000013023	Nop53	100	81.743	ENSPANG00000002964	NOP53	100	81.743	Papio_anubis
ENSRNOG00000013023	Nop53	88	51.059	ENSPKIG00000000127	nop53	88	50.118	Paramormyrops_kingsleyae
ENSRNOG00000013023	Nop53	88	46.809	ENSPMGG00000021579	nop53	88	48.009	Periophthalmus_magnuspinnatus
ENSRNOG00000013023	Nop53	100	91.494	ENSPEMG00000006856	Nop53	100	91.494	Peromyscus_maniculatus_bairdii
ENSRNOG00000013023	Nop53	99	64.780	ENSPCIG00000016718	NOP53	99	66.109	Phascolarctos_cinereus
ENSRNOG00000013023	Nop53	88	48.492	ENSPFOG00000002839	nop53	89	48.492	Poecilia_formosa
ENSRNOG00000013023	Nop53	88	48.492	ENSPLAG00000006675	nop53	89	48.492	Poecilia_latipinna
ENSRNOG00000013023	Nop53	88	48.492	ENSPMEG00000009589	nop53	89	48.492	Poecilia_mexicana
ENSRNOG00000013023	Nop53	88	44.731	ENSPREG00000008711	nop53	88	45.116	Poecilia_reticulata
ENSRNOG00000013023	Nop53	100	75.311	ENSPPYG00000010181	NOP53	100	75.311	Pongo_abelii
ENSRNOG00000013023	Nop53	98	75.949	ENSPCAG00000007692	NOP53	100	75.949	Procavia_capensis
ENSRNOG00000013023	Nop53	90	82.353	ENSPCOG00000016124	NOP53	100	80.479	Propithecus_coquereli
ENSRNOG00000013023	Nop53	84	78.409	ENSPVAG00000014671	NOP53	84	78.409	Pteropus_vampyrus
ENSRNOG00000013023	Nop53	88	47.775	ENSPNYG00000001341	nop53	96	47.021	Pundamilia_nyererei
ENSRNOG00000013023	Nop53	88	52.113	ENSPNAG00000012520	nop53	89	51.054	Pygocentrus_nattereri
ENSRNOG00000013023	Nop53	100	81.328	ENSRBIG00000036427	NOP53	100	81.328	Rhinopithecus_bieti
ENSRNOG00000013023	Nop53	100	81.535	ENSRROG00000042298	NOP53	100	81.535	Rhinopithecus_roxellana
ENSRNOG00000013023	Nop53	96	82.151	ENSSBOG00000033115	NOP53	100	80.785	Saimiri_boliviensis_boliviensis
ENSRNOG00000013023	Nop53	84	67.892	ENSSHAG00000002239	NOP53	100	67.397	Sarcophilus_harrisii
ENSRNOG00000013023	Nop53	88	52.582	ENSSFOG00015007062	gltscr2	88	52.570	Scleropages_formosus
ENSRNOG00000013023	Nop53	88	47.086	ENSSMAG00000000212	nop53	89	47.786	Scophthalmus_maximus
ENSRNOG00000013023	Nop53	88	48.357	ENSSDUG00000010575	nop53	96	46.652	Seriola_dumerili
ENSRNOG00000013023	Nop53	88	47.529	ENSSLDG00000000140	nop53	94	45.887	Seriola_lalandi_dorsalis
ENSRNOG00000013023	Nop53	82	80.000	ENSSARG00000014109	NOP53	83	76.923	Sorex_araneus
ENSRNOG00000013023	Nop53	97	47.569	ENSSPUG00000004420	NOP53	98	47.569	Sphenodon_punctatus
ENSRNOG00000013023	Nop53	88	46.404	ENSSPAG00000000318	nop53	89	47.073	Stegastes_partitus
ENSRNOG00000013023	Nop53	98	77.801	ENSSSCG00000022774	NOP53	100	77.273	Sus_scrofa
ENSRNOG00000013023	Nop53	88	47.005	ENSTRUG00000004944	nop53	89	47.005	Takifugu_rubripes
ENSRNOG00000013023	Nop53	79	89.764	ENSTBEG00000008708	NOP53	80	89.764	Tupaia_belangeri
ENSRNOG00000013023	Nop53	100	77.823	ENSTTRG00000011831	NOP53	100	77.823	Tursiops_truncatus
ENSRNOG00000013023	Nop53	99	76.507	ENSUAMG00000028254	NOP53	100	76.033	Ursus_americanus
ENSRNOG00000013023	Nop53	78	77.165	ENSVVUG00000023365	NOP53	78	76.020	Vulpes_vulpes
ENSRNOG00000013023	Nop53	93	69.912	ENSXETG00000002782	nop53	99	51.483	Xenopus_tropicalis
ENSRNOG00000013023	Nop53	88	49.417	ENSXCOG00000004436	nop53	88	49.299	Xiphophorus_couchianus
ENSRNOG00000013023	Nop53	88	48.736	ENSXMAG00000002589	nop53	89	48.736	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0000027	ribosomal large subunit assembly	-	ISO	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0001650	fibrillar center	-	IEA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0001932	regulation of protein phosphorylation	-	IEA	Process
GO:0001932	regulation of protein phosphorylation	-	ISO	Process
GO:0002039	p53 binding	-	IEA	Function
GO:0002039	p53 binding	-	ISO	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006281	DNA repair	-	ISO	Process
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0007095	mitotic G2 DNA damage checkpoint	-	IEA	Process
GO:0007095	mitotic G2 DNA damage checkpoint	-	ISO	Process
GO:0008097	5S rRNA binding	21873635.	IBA	Function
GO:0008097	5S rRNA binding	-	ISO	Function
GO:0014067	negative regulation of phosphatidylinositol 3-kinase signaling	-	IEA	Process
GO:0014067	negative regulation of phosphatidylinositol 3-kinase signaling	-	ISO	Process
GO:0031333	negative regulation of protein complex assembly	-	IEA	Process
GO:0031333	negative regulation of protein complex assembly	-	ISO	Process
GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0033553	rDNA heterochromatin	-	IEA	Component
GO:0033553	rDNA heterochromatin	-	ISO	Component
GO:0039535	regulation of RIG-I signaling pathway	-	IEA	Process
GO:0039535	regulation of RIG-I signaling pathway	-	ISO	Process
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0042981	regulation of apoptotic process	-	IEA	Process
GO:0042981	regulation of apoptotic process	-	ISO	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0050821	protein stabilization	-	IEA	Process
GO:0050821	protein stabilization	-	ISO	Process
GO:0051726	regulation of cell cycle	-	ISO	Process
GO:0051898	negative regulation of protein kinase B signaling	-	IEA	Process
GO:0051898	negative regulation of protein kinase B signaling	-	ISO	Process
GO:0071456	cellular response to hypoxia	-	IEA	Process
GO:0071456	cellular response to hypoxia	-	ISO	Process
GO:1901796	regulation of signal transduction by p53 class mediator	-	ISO	Process
GO:1901797	negative regulation of signal transduction by p53 class mediator	-	IEA	Process
GO:1901797	negative regulation of signal transduction by p53 class mediator	-	ISO	Process
GO:1901837	negative regulation of transcription of nucleolar large rRNA by RNA polymerase I	-	IEA	Process
GO:1901837	negative regulation of transcription of nucleolar large rRNA by RNA polymerase I	-	ISO	Process
GO:1902570	protein localization to nucleolus	-	IEA	Process
GO:1902570	protein localization to nucleolus	-	ISO	Process
GO:1903006	positive regulation of protein K63-linked deubiquitination	-	IEA	Process
GO:1903006	positive regulation of protein K63-linked deubiquitination	-	ISO	Process
GO:1903715	regulation of aerobic respiration	-	IEA	Process
GO:1903715	regulation of aerobic respiration	-	ISO	Process
GO:1990173	protein localization to nucleoplasm	-	IEA	Process
GO:1990173	protein localization to nucleoplasm	-	ISO	Process