EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000013040 (Gene tree)
Gene ID: 311835
Gene Symbol: Ddx31
Alias: LOC311835
Full Name: DEAD-box helicase 31
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 65798 bases
Position: chr3:7422820-7488617
Accession: 1304895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000061319	ResIII	PF04851.15	1.5e-06	1	1
ENSRNOP00000061319	DEAD	PF00270.29	7.3e-48	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000064323	-	4151	XM_006233799	ENSRNOP00000061319	682 (aa)	XP_006233861	G3V9V8

Gene Model

Click here to download ENSRNOG00000013040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000013040	Ddx31	75	31.008	ENSRNOG00000001043	Ddx55	75	31.008
ENSRNOG00000013040	Ddx31	61	30.374	ENSRNOG00000051170	Ddx17	62	30.243
ENSRNOG00000013040	Ddx31	62	32.477	ENSRNOG00000007838	Ddx47	83	32.477
ENSRNOG00000013040	Ddx31	56	31.328	ENSRNOG00000019817	Ddx28	68	31.328
ENSRNOG00000013040	Ddx31	57	39.344	ENSRNOG00000006652	Ddx1	54	39.344
ENSRNOG00000013040	Ddx31	56	32.051	ENSRNOG00000030680	Ddx5	55	32.051
ENSRNOG00000013040	Ddx31	67	31.613	ENSRNOG00000022368	Ddx49	86	31.613
ENSRNOG00000013040	Ddx31	57	30.051	ENSRNOG00000050868	Ddx43	54	30.051
ENSRNOG00000013040	Ddx31	53	30.270	ENSRNOG00000012771	Ddx41	52	30.270
ENSRNOG00000013040	Ddx31	62	30.594	ENSRNOG00000042451	Ddx59	62	30.137
ENSRNOG00000013040	Ddx31	73	37.325	ENSRNOG00000025430	Ddx18	62	37.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013040	Ddx31	99	80.725	ENSG00000125485	DDX31	92	80.725	Homo_sapiens
ENSRNOG00000013040	Ddx31	87	60.784	ENSAPOG00000004212	ddx31	93	56.515	Acanthochromis_polyacanthus
ENSRNOG00000013040	Ddx31	99	78.166	ENSAMEG00000004120	DDX31	94	78.166	Ailuropoda_melanoleuca
ENSRNOG00000013040	Ddx31	78	62.018	ENSACIG00000006033	ddx31	90	60.993	Amphilophus_citrinellus
ENSRNOG00000013040	Ddx31	55	65.699	ENSAOCG00000023183	ddx31	71	65.699	Amphiprion_ocellaris
ENSRNOG00000013040	Ddx31	87	60.130	ENSATEG00000015522	ddx31	87	56.186	Anabas_testudineus
ENSRNOG00000013040	Ddx31	96	66.518	ENSAPLG00000016396	DDX31	99	65.412	Anas_platyrhynchos
ENSRNOG00000013040	Ddx31	99	80.000	ENSANAG00000035120	DDX31	94	80.000	Aotus_nancymaae
ENSRNOG00000013040	Ddx31	86	58.932	ENSACLG00000008720	ddx31	98	58.553	Astatotilapia_calliptera
ENSRNOG00000013040	Ddx31	82	59.123	ENSAMXG00000009673	ddx31	93	55.887	Astyanax_mexicanus
ENSRNOG00000013040	Ddx31	99	76.565	ENSBTAG00000003530	DDX31	95	77.071	Bos_taurus
ENSRNOG00000013040	Ddx31	99	80.378	ENSCJAG00000018173	DDX31	95	82.877	Callithrix_jacchus
ENSRNOG00000013040	Ddx31	87	79.070	ENSCAFG00020024548	DDX31	88	79.070	Canis_lupus_dingo
ENSRNOG00000013040	Ddx31	99	76.274	ENSCHIG00000020011	DDX31	93	76.274	Capra_hircus
ENSRNOG00000013040	Ddx31	99	77.035	ENSTSYG00000009182	DDX31	93	77.001	Carlito_syrichta
ENSRNOG00000013040	Ddx31	98	77.105	ENSCAPG00000015227	DDX31	94	77.105	Cavia_aperea
ENSRNOG00000013040	Ddx31	98	79.056	ENSCPOG00000014243	DDX31	92	79.056	Cavia_porcellus
ENSRNOG00000013040	Ddx31	99	80.290	ENSCCAG00000025989	DDX31	92	80.290	Cebus_capucinus
ENSRNOG00000013040	Ddx31	99	78.116	ENSCATG00000038462	DDX31	92	78.116	Cercocebus_atys
ENSRNOG00000013040	Ddx31	99	80.786	ENSCLAG00000008431	DDX31	99	80.786	Chinchilla_lanigera
ENSRNOG00000013040	Ddx31	99	80.290	ENSCSAG00000014953	DDX31	92	80.290	Chlorocebus_sabaeus
ENSRNOG00000013040	Ddx31	99	77.068	ENSCHOG00000001526	DDX31	95	77.068	Choloepus_hoffmanni
ENSRNOG00000013040	Ddx31	74	72.189	ENSCPBG00000021215	DDX31	90	72.189	Chrysemys_picta_bellii
ENSRNOG00000013040	Ddx31	88	43.444	ENSCING00000009272	-	100	43.444	Ciona_intestinalis
ENSRNOG00000013040	Ddx31	75	45.524	ENSCSAVG00000004227	-	98	45.524	Ciona_savignyi
ENSRNOG00000013040	Ddx31	99	80.552	ENSCANG00000036241	DDX31	93	82.198	Colobus_angolensis_palliatus
ENSRNOG00000013040	Ddx31	99	90.073	ENSCGRG00001014191	Ddx31	96	90.073	Cricetulus_griseus_chok1gshd
ENSRNOG00000013040	Ddx31	99	90.073	ENSCGRG00000008396	Ddx31	96	90.073	Cricetulus_griseus_crigri
ENSRNOG00000013040	Ddx31	88	58.023	ENSCSEG00000008541	ddx31	83	57.460	Cynoglossus_semilaevis
ENSRNOG00000013040	Ddx31	88	59.211	ENSCVAG00000000189	ddx31	99	58.766	Cyprinodon_variegatus
ENSRNOG00000013040	Ddx31	91	59.311	ENSDARG00000035507	ddx31	86	58.733	Danio_rerio
ENSRNOG00000013040	Ddx31	98	79.118	ENSDNOG00000009865	DDX31	94	79.118	Dasypus_novemcinctus
ENSRNOG00000013040	Ddx31	99	79.209	ENSDORG00000005071	Ddx31	100	79.209	Dipodomys_ordii
ENSRNOG00000013040	Ddx31	78	41.331	FBgn0027602	CG8611	60	42.222	Drosophila_melanogaster
ENSRNOG00000013040	Ddx31	92	71.049	ENSETEG00000007908	DDX31	83	71.049	Echinops_telfairi
ENSRNOG00000013040	Ddx31	67	40.678	ENSEBUG00000014723	-	99	40.678	Eptatretus_burgeri
ENSRNOG00000013040	Ddx31	98	80.707	ENSEASG00005009845	DDX31	93	80.730	Equus_asinus_asinus
ENSRNOG00000013040	Ddx31	98	80.412	ENSECAG00000005146	DDX31	93	80.438	Equus_caballus
ENSRNOG00000013040	Ddx31	98	75.704	ENSEEUG00000012785	DDX31	90	75.704	Erinaceus_europaeus
ENSRNOG00000013040	Ddx31	89	60.932	ENSELUG00000001052	ddx31	89	57.670	Esox_lucius
ENSRNOG00000013040	Ddx31	99	72.515	ENSFCAG00000007106	DDX31	95	72.515	Felis_catus
ENSRNOG00000013040	Ddx31	97	65.634	ENSFALG00000001468	DDX31	99	64.562	Ficedula_albicollis
ENSRNOG00000013040	Ddx31	99	80.174	ENSFDAG00000007853	DDX31	99	80.174	Fukomys_damarensis
ENSRNOG00000013040	Ddx31	88	59.841	ENSFHEG00000009047	ddx31	84	59.561	Fundulus_heteroclitus
ENSRNOG00000013040	Ddx31	63	69.265	ENSGALG00000041473	DDX31	91	69.265	Gallus_gallus
ENSRNOG00000013040	Ddx31	87	58.361	ENSGAFG00000009888	ddx31	88	56.693	Gambusia_affinis
ENSRNOG00000013040	Ddx31	99	68.307	ENSGAGG00000012482	DDX31	94	68.307	Gopherus_agassizii
ENSRNOG00000013040	Ddx31	99	80.435	ENSGGOG00000008314	DDX31	92	76.812	Gorilla_gorilla
ENSRNOG00000013040	Ddx31	95	55.572	ENSHBUG00000019539	ddx31	77	55.572	Haplochromis_burtoni
ENSRNOG00000013040	Ddx31	98	80.798	ENSHGLG00000013194	DDX31	97	77.778	Heterocephalus_glaber_female
ENSRNOG00000013040	Ddx31	91	79.073	ENSHGLG00100016868	DDX31	100	79.073	Heterocephalus_glaber_male
ENSRNOG00000013040	Ddx31	87	59.832	ENSHCOG00000020998	ddx31	86	59.832	Hippocampus_comes
ENSRNOG00000013040	Ddx31	97	57.675	ENSIPUG00000020592	ddx31	93	57.437	Ictalurus_punctatus
ENSRNOG00000013040	Ddx31	98	75.652	ENSSTOG00000007985	DDX31	99	75.652	Ictidomys_tridecemlineatus
ENSRNOG00000013040	Ddx31	98	77.049	ENSJJAG00000018491	Ddx31	98	77.049	Jaculus_jaculus
ENSRNOG00000013040	Ddx31	72	65.927	ENSKMAG00000006165	ddx31	96	63.826	Kryptolebias_marmoratus
ENSRNOG00000013040	Ddx31	88	59.539	ENSLBEG00000008550	ddx31	84	57.453	Labrus_bergylta
ENSRNOG00000013040	Ddx31	75	59.962	ENSLACG00000008136	DDX31	95	59.962	Latimeria_chalumnae
ENSRNOG00000013040	Ddx31	96	55.198	ENSLOCG00000005630	ddx31	92	55.198	Lepisosteus_oculatus
ENSRNOG00000013040	Ddx31	99	79.651	ENSLAFG00000015379	DDX31	99	79.651	Loxodonta_africana
ENSRNOG00000013040	Ddx31	99	80.870	ENSMFAG00000036342	DDX31	80	80.870	Macaca_fascicularis
ENSRNOG00000013040	Ddx31	99	80.725	ENSMMUG00000004590	DDX31	92	80.725	Macaca_mulatta
ENSRNOG00000013040	Ddx31	99	80.725	ENSMNEG00000045539	DDX31	94	83.151	Macaca_nemestrina
ENSRNOG00000013040	Ddx31	99	80.870	ENSMLEG00000032393	DDX31	78	82.895	Mandrillus_leucophaeus
ENSRNOG00000013040	Ddx31	88	60.323	ENSMAMG00000019252	ddx31	87	60.548	Mastacembelus_armatus
ENSRNOG00000013040	Ddx31	86	58.725	ENSMZEG00005020937	ddx31	98	58.347	Maylandia_zebra
ENSRNOG00000013040	Ddx31	96	64.636	ENSMGAG00000006002	DDX31	97	64.422	Meleagris_gallopavo
ENSRNOG00000013040	Ddx31	92	89.540	ENSMAUG00000016824	Ddx31	99	89.540	Mesocricetus_auratus
ENSRNOG00000013040	Ddx31	99	79.420	ENSMICG00000010581	DDX31	93	79.420	Microcebus_murinus
ENSRNOG00000013040	Ddx31	99	89.327	ENSMOCG00000020938	Ddx31	99	89.912	Microtus_ochrogaster
ENSRNOG00000013040	Ddx31	78	60.259	ENSMMOG00000020996	ddx31	97	59.425	Mola_mola
ENSRNOG00000013040	Ddx31	99	73.768	ENSMODG00000012555	DDX31	94	73.768	Monodelphis_domestica
ENSRNOG00000013040	Ddx31	83	61.847	ENSMALG00000002614	ddx31	87	56.336	Monopterus_albus
ENSRNOG00000013040	Ddx31	99	91.801	MGP_CAROLIEiJ_G0023360	Ddx31	99	91.801	Mus_caroli
ENSRNOG00000013040	Ddx31	99	92.240	ENSMUSG00000026806	Ddx31	99	92.240	Mus_musculus
ENSRNOG00000013040	Ddx31	99	91.508	MGP_PahariEiJ_G0024817	Ddx31	99	91.508	Mus_pahari
ENSRNOG00000013040	Ddx31	99	92.240	MGP_SPRETEiJ_G0024277	Ddx31	99	92.240	Mus_spretus
ENSRNOG00000013040	Ddx31	99	78.655	ENSMPUG00000012522	DDX31	80	78.655	Mustela_putorius_furo
ENSRNOG00000013040	Ddx31	99	71.755	ENSMLUG00000011507	DDX31	93	72.000	Myotis_lucifugus
ENSRNOG00000013040	Ddx31	96	85.068	ENSNGAG00000020928	Ddx31	99	84.141	Nannospalax_galili
ENSRNOG00000013040	Ddx31	86	61.436	ENSNBRG00000024320	ddx31	98	60.920	Neolamprologus_brichardi
ENSRNOG00000013040	Ddx31	99	80.725	ENSNLEG00000012870	DDX31	80	80.725	Nomascus_leucogenys
ENSRNOG00000013040	Ddx31	99	67.878	ENSMEUG00000008760	DDX31	96	67.878	Notamacropus_eugenii
ENSRNOG00000013040	Ddx31	65	89.573	ENSOPRG00000004477	-	72	89.573	Ochotona_princeps
ENSRNOG00000013040	Ddx31	97	73.393	ENSODEG00000015685	DDX31	99	74.290	Octodon_degus
ENSRNOG00000013040	Ddx31	87	60.691	ENSONIG00000000711	ddx31	89	60.325	Oreochromis_niloticus
ENSRNOG00000013040	Ddx31	91	71.654	ENSOANG00000005047	DDX31	99	71.654	Ornithorhynchus_anatinus
ENSRNOG00000013040	Ddx31	97	77.893	ENSOCUG00000008739	DDX31	99	77.893	Oryctolagus_cuniculus
ENSRNOG00000013040	Ddx31	87	58.226	ENSORLG00000016628	ddx31	78	58.626	Oryzias_latipes
ENSRNOG00000013040	Ddx31	87	58.481	ENSORLG00020017897	ddx31	82	56.748	Oryzias_latipes_hni
ENSRNOG00000013040	Ddx31	86	59.032	ENSOMEG00000004600	ddx31	75	58.665	Oryzias_melastigma
ENSRNOG00000013040	Ddx31	92	80.599	ENSOGAG00000004072	DDX31	99	80.599	Otolemur_garnettii
ENSRNOG00000013040	Ddx31	99	76.058	ENSOARG00000005879	DDX31	97	76.058	Ovis_aries
ENSRNOG00000013040	Ddx31	99	80.870	ENSPPAG00000027761	DDX31	92	77.246	Pan_paniscus
ENSRNOG00000013040	Ddx31	99	80.870	ENSPTRG00000021500	DDX31	92	77.246	Pan_troglodytes
ENSRNOG00000013040	Ddx31	99	80.580	ENSPANG00000025987	DDX31	80	80.580	Papio_anubis
ENSRNOG00000013040	Ddx31	96	69.012	ENSPSIG00000006722	DDX31	92	69.012	Pelodiscus_sinensis
ENSRNOG00000013040	Ddx31	89	54.911	ENSPMGG00000020721	ddx31	91	54.911	Periophthalmus_magnuspinnatus
ENSRNOG00000013040	Ddx31	99	89.359	ENSPEMG00000014798	Ddx31	99	89.796	Peromyscus_maniculatus_bairdii
ENSRNOG00000013040	Ddx31	99	73.478	ENSPCIG00000019742	DDX31	96	73.869	Phascolarctos_cinereus
ENSRNOG00000013040	Ddx31	90	57.276	ENSPFOG00000000144	ddx31	88	57.276	Poecilia_formosa
ENSRNOG00000013040	Ddx31	64	60.544	ENSPLAG00000019817	ddx31	83	60.544	Poecilia_latipinna
ENSRNOG00000013040	Ddx31	90	56.942	ENSPMEG00000018263	ddx31	86	58.199	Poecilia_mexicana
ENSRNOG00000013040	Ddx31	90	57.722	ENSPREG00000002870	-	88	57.722	Poecilia_reticulata
ENSRNOG00000013040	Ddx31	99	78.986	ENSPPYG00000019713	DDX31	81	78.986	Pongo_abelii
ENSRNOG00000013040	Ddx31	98	72.901	ENSPCAG00000004249	DDX31	80	72.901	Procavia_capensis
ENSRNOG00000013040	Ddx31	99	77.907	ENSPCOG00000010431	DDX31	83	77.907	Propithecus_coquereli
ENSRNOG00000013040	Ddx31	99	74.128	ENSPVAG00000002050	DDX31	83	74.273	Pteropus_vampyrus
ENSRNOG00000013040	Ddx31	86	59.060	ENSPNYG00000013810	ddx31	97	58.678	Pundamilia_nyererei
ENSRNOG00000013040	Ddx31	90	60.317	ENSPNAG00000022187	ddx31	86	59.591	Pygocentrus_nattereri
ENSRNOG00000013040	Ddx31	99	78.343	ENSRBIG00000042353	DDX31	81	78.343	Rhinopithecus_bieti
ENSRNOG00000013040	Ddx31	99	80.814	ENSRROG00000044427	DDX31	96	83.390	Rhinopithecus_roxellana
ENSRNOG00000013040	Ddx31	94	31.206	YKR024C	-	92	31.206	Saccharomyces_cerevisiae
ENSRNOG00000013040	Ddx31	98	81.121	ENSSBOG00000021668	DDX31	92	80.435	Saimiri_boliviensis_boliviensis
ENSRNOG00000013040	Ddx31	98	73.900	ENSSHAG00000018804	DDX31	93	74.047	Sarcophilus_harrisii
ENSRNOG00000013040	Ddx31	93	61.310	ENSSFOG00015012974	ddx31	85	61.310	Scleropages_formosus
ENSRNOG00000013040	Ddx31	88	58.824	ENSSMAG00000017673	ddx31	84	54.599	Scophthalmus_maximus
ENSRNOG00000013040	Ddx31	80	58.364	ENSSDUG00000011751	ddx31	97	58.378	Seriola_dumerili
ENSRNOG00000013040	Ddx31	69	59.081	ENSSLDG00000005425	-	97	57.384	Seriola_lalandi_dorsalis
ENSRNOG00000013040	Ddx31	97	67.257	ENSSPUG00000016144	DDX31	99	67.257	Sphenodon_punctatus
ENSRNOG00000013040	Ddx31	56	64.416	ENSSPAG00000018034	ddx31	89	58.758	Stegastes_partitus
ENSRNOG00000013040	Ddx31	98	74.669	ENSSSCG00000005729	DDX31	94	72.263	Sus_scrofa
ENSRNOG00000013040	Ddx31	90	68.927	ENSTGUG00000005142	DDX31	100	68.927	Taeniopygia_guttata
ENSRNOG00000013040	Ddx31	87	55.178	ENSTRUG00000013699	ddx31	96	57.642	Takifugu_rubripes
ENSRNOG00000013040	Ddx31	88	58.785	ENSTNIG00000006039	ddx31	97	58.785	Tetraodon_nigroviridis
ENSRNOG00000013040	Ddx31	84	77.607	ENSTBEG00000013672	DDX31	97	77.607	Tupaia_belangeri
ENSRNOG00000013040	Ddx31	99	76.990	ENSTTRG00000014093	DDX31	83	76.990	Tursiops_truncatus
ENSRNOG00000013040	Ddx31	98	74.853	ENSUAMG00000024811	DDX31	91	74.853	Ursus_americanus
ENSRNOG00000013040	Ddx31	97	74.852	ENSUMAG00000016669	DDX31	97	73.953	Ursus_maritimus
ENSRNOG00000013040	Ddx31	65	76.078	ENSVPAG00000004538	-	54	75.875	Vicugna_pacos
ENSRNOG00000013040	Ddx31	87	78.904	ENSVVUG00000028399	DDX31	88	78.904	Vulpes_vulpes
ENSRNOG00000013040	Ddx31	90	61.440	ENSXETG00000006258	ddx31	99	61.440	Xenopus_tropicalis
ENSRNOG00000013040	Ddx31	80	55.657	ENSXCOG00000018753	ddx31	100	55.657	Xiphophorus_couchianus
ENSRNOG00000013040	Ddx31	88	58.333	ENSXMAG00000006678	ddx31	90	58.173	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0042254	ribosome biogenesis	-	ISO	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component