EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000013078 (Gene tree)
Gene ID: 298086
Gene Symbol: Zcchc7
Alias: LOC298086
Full Name: zinc finger CCHC-type containing 7
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 179163 bases
Position: chr5:60250546-60429708
Accession: 1310467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000017707	zf-CCHC	PF00098.23	6.7e-08	1	2
ENSRNOP00000017707	zf-CCHC	PF00098.23	6.7e-08	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000017707	-	1995	-	ENSRNOP00000017707	542 (aa)	-	F1M989

Gene Model

Click here to download ENSRNOG00000013078's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013078	Zcchc7	99	64.207	ENSG00000147905	ZCCHC7	99	68.137	Homo_sapiens
ENSRNOG00000013078	Zcchc7	87	34.077	ENSATEG00000020112	zcchc7	84	33.063	Anabas_testudineus
ENSRNOG00000013078	Zcchc7	88	46.139	ENSACAG00000011894	ZCCHC7	99	43.426	Anolis_carolinensis
ENSRNOG00000013078	Zcchc7	99	62.362	ENSANAG00000029334	ZCCHC7	99	62.731	Aotus_nancymaae
ENSRNOG00000013078	Zcchc7	75	36.617	ENSACLG00000014533	zcchc7	70	39.140	Astatotilapia_calliptera
ENSRNOG00000013078	Zcchc7	99	71.324	ENSBTAG00000025859	ZCCHC7	99	71.324	Bos_taurus
ENSRNOG00000013078	Zcchc7	99	62.407	ENSCJAG00000010465	ZCCHC7	99	62.407	Callithrix_jacchus
ENSRNOG00000013078	Zcchc7	76	77.698	ENSCAFG00000024624	ZCCHC7	96	80.000	Canis_familiaris
ENSRNOG00000013078	Zcchc7	99	71.140	ENSCHIG00000009716	ZCCHC7	99	71.140	Capra_hircus
ENSRNOG00000013078	Zcchc7	99	65.065	ENSTSYG00000004182	ZCCHC7	99	65.065	Carlito_syrichta
ENSRNOG00000013078	Zcchc7	99	70.350	ENSCPOG00000013472	ZCCHC7	96	70.350	Cavia_porcellus
ENSRNOG00000013078	Zcchc7	99	62.362	ENSCCAG00000033533	ZCCHC7	99	62.915	Cebus_capucinus
ENSRNOG00000013078	Zcchc7	99	64.207	ENSCATG00000021090	ZCCHC7	99	64.207	Cercocebus_atys
ENSRNOG00000013078	Zcchc7	99	73.665	ENSCLAG00000013297	ZCCHC7	99	73.665	Chinchilla_lanigera
ENSRNOG00000013078	Zcchc7	99	64.022	ENSCSAG00000010760	ZCCHC7	99	63.284	Chlorocebus_sabaeus
ENSRNOG00000013078	Zcchc7	99	46.886	ENSCPBG00000006836	ZCCHC7	99	48.966	Chrysemys_picta_bellii
ENSRNOG00000013078	Zcchc7	99	64.207	ENSCANG00000032165	ZCCHC7	99	63.653	Colobus_angolensis_palliatus
ENSRNOG00000013078	Zcchc7	99	82.560	ENSCGRG00001018503	Zcchc7	99	82.560	Cricetulus_griseus_chok1gshd
ENSRNOG00000013078	Zcchc7	100	81.768	ENSCGRG00000006136	Zcchc7	100	81.768	Cricetulus_griseus_crigri
ENSRNOG00000013078	Zcchc7	76	38.758	ENSCSEG00000005022	zcchc7	73	38.544	Cynoglossus_semilaevis
ENSRNOG00000013078	Zcchc7	68	33.251	ENSCVAG00000019331	zcchc7	99	30.702	Cyprinodon_variegatus
ENSRNOG00000013078	Zcchc7	99	31.929	ENSDARG00000055443	zcchc7	96	31.818	Danio_rerio
ENSRNOG00000013078	Zcchc7	99	71.271	ENSDNOG00000004148	ZCCHC7	98	74.892	Dasypus_novemcinctus
ENSRNOG00000013078	Zcchc7	99	71.560	ENSEASG00005000659	ZCCHC7	99	71.193	Equus_asinus_asinus
ENSRNOG00000013078	Zcchc7	99	71.376	ENSECAG00000006883	ZCCHC7	99	71.009	Equus_caballus
ENSRNOG00000013078	Zcchc7	99	72.560	ENSFCAG00000029100	ZCCHC7	99	72.560	Felis_catus
ENSRNOG00000013078	Zcchc7	98	43.058	ENSFALG00000012975	ZCCHC7	99	42.609	Ficedula_albicollis
ENSRNOG00000013078	Zcchc7	99	72.059	ENSFDAG00000014200	ZCCHC7	99	72.059	Fukomys_damarensis
ENSRNOG00000013078	Zcchc7	90	47.137	ENSGALG00000028675	ZCCHC7	98	46.503	Gallus_gallus
ENSRNOG00000013078	Zcchc7	99	47.660	ENSGAGG00000022960	ZCCHC7	99	48.527	Gopherus_agassizii
ENSRNOG00000013078	Zcchc7	75	36.617	ENSHBUG00000000064	zcchc7	70	38.925	Haplochromis_burtoni
ENSRNOG00000013078	Zcchc7	99	71.771	ENSHGLG00000001861	ZCCHC7	99	71.771	Heterocephalus_glaber_female
ENSRNOG00000013078	Zcchc7	63	72.141	ENSHGLG00100010879	-	100	72.141	Heterocephalus_glaber_male
ENSRNOG00000013078	Zcchc7	99	33.051	ENSIPUG00000001541	zcchc7	99	34.179	Ictalurus_punctatus
ENSRNOG00000013078	Zcchc7	100	72.810	ENSSTOG00000030723	ZCCHC7	94	72.445	Ictidomys_tridecemlineatus
ENSRNOG00000013078	Zcchc7	75	31.873	ENSKMAG00000000054	zcchc7	75	33.095	Kryptolebias_marmoratus
ENSRNOG00000013078	Zcchc7	52	37.374	ENSKMAG00000011357	-	68	36.508	Kryptolebias_marmoratus
ENSRNOG00000013078	Zcchc7	99	37.128	ENSLOCG00000012834	zcchc7	99	36.412	Lepisosteus_oculatus
ENSRNOG00000013078	Zcchc7	99	64.022	ENSMFAG00000006899	ZCCHC7	99	64.022	Macaca_fascicularis
ENSRNOG00000013078	Zcchc7	99	64.022	ENSMNEG00000028022	ZCCHC7	99	64.022	Macaca_nemestrina
ENSRNOG00000013078	Zcchc7	99	64.207	ENSMLEG00000014436	-	99	64.207	Mandrillus_leucophaeus
ENSRNOG00000013078	Zcchc7	75	38.341	ENSMAMG00000000481	zcchc7	69	39.168	Mastacembelus_armatus
ENSRNOG00000013078	Zcchc7	75	36.403	ENSMZEG00005021613	zcchc7	70	38.925	Maylandia_zebra
ENSRNOG00000013078	Zcchc7	99	79.777	ENSMAUG00000019812	Zcchc7	99	79.777	Mesocricetus_auratus
ENSRNOG00000013078	Zcchc7	100	76.611	ENSMOCG00000017184	Zcchc7	100	76.611	Microtus_ochrogaster
ENSRNOG00000013078	Zcchc7	73	33.578	ENSMMOG00000007347	zcchc7	68	33.744	Mola_mola
ENSRNOG00000013078	Zcchc7	87	62.033	ENSMODG00000002729	ZCCHC7	99	56.781	Monodelphis_domestica
ENSRNOG00000013078	Zcchc7	98	87.006	MGP_CAROLIEiJ_G0025964	Zcchc7	100	86.556	Mus_caroli
ENSRNOG00000013078	Zcchc7	100	87.845	ENSMUSG00000035649	Zcchc7	100	87.845	Mus_musculus
ENSRNOG00000013078	Zcchc7	100	85.451	MGP_PahariEiJ_G0024111	Zcchc7	100	85.451	Mus_pahari
ENSRNOG00000013078	Zcchc7	100	87.109	MGP_SPRETEiJ_G0026927	Zcchc7	100	86.924	Mus_spretus
ENSRNOG00000013078	Zcchc7	99	66.176	ENSMPUG00000006023	ZCCHC7	99	66.176	Mustela_putorius_furo
ENSRNOG00000013078	Zcchc7	67	70.190	ENSMLUG00000012660	-	99	69.126	Myotis_lucifugus
ENSRNOG00000013078	Zcchc7	100	77.574	ENSNGAG00000001898	Zcchc7	99	77.574	Nannospalax_galili
ENSRNOG00000013078	Zcchc7	75	36.247	ENSNBRG00000016426	zcchc7	70	39.186	Neolamprologus_brichardi
ENSRNOG00000013078	Zcchc7	99	63.771	ENSNLEG00000003641	ZCCHC7	99	63.771	Nomascus_leucogenys
ENSRNOG00000013078	Zcchc7	75	40.281	ENSONIG00000008954	zcchc7	81	41.299	Oreochromis_niloticus
ENSRNOG00000013078	Zcchc7	99	56.119	ENSOANG00000007577	ZCCHC7	99	55.420	Ornithorhynchus_anatinus
ENSRNOG00000013078	Zcchc7	76	36.807	ENSORLG00020006628	zcchc7	70	34.341	Oryzias_latipes_hni
ENSRNOG00000013078	Zcchc7	76	36.364	ENSORLG00015004084	zcchc7	70	33.477	Oryzias_latipes_hsok
ENSRNOG00000013078	Zcchc7	99	71.140	ENSOARG00000011504	ZCCHC7	99	71.140	Ovis_aries
ENSRNOG00000013078	Zcchc7	62	61.947	ENSPPAG00000038294	-	99	61.947	Pan_paniscus
ENSRNOG00000013078	Zcchc7	99	72.560	ENSPTIG00000012509	ZCCHC7	99	72.560	Panthera_tigris_altaica
ENSRNOG00000013078	Zcchc7	99	64.576	ENSPTRG00000020939	ZCCHC7	99	64.576	Pan_troglodytes
ENSRNOG00000013078	Zcchc7	99	64.207	ENSPANG00000025472	ZCCHC7	99	63.469	Papio_anubis
ENSRNOG00000013078	Zcchc7	99	34.355	ENSPKIG00000012787	zcchc7	100	34.528	Paramormyrops_kingsleyae
ENSRNOG00000013078	Zcchc7	62	49.128	ENSPSIG00000003231	ZCCHC7	99	47.674	Pelodiscus_sinensis
ENSRNOG00000013078	Zcchc7	73	34.739	ENSPMGG00000024157	zcchc7	75	34.568	Periophthalmus_magnuspinnatus
ENSRNOG00000013078	Zcchc7	62	83.631	ENSPEMG00000017839	Zcchc7	91	83.631	Peromyscus_maniculatus_bairdii
ENSRNOG00000013078	Zcchc7	87	58.799	ENSPCIG00000014809	ZCCHC7	99	54.628	Phascolarctos_cinereus
ENSRNOG00000013078	Zcchc7	73	37.136	ENSPFOG00000011650	zcchc7	77	37.981	Poecilia_formosa
ENSRNOG00000013078	Zcchc7	75	35.853	ENSPLAG00000000650	zcchc7	99	32.784	Poecilia_latipinna
ENSRNOG00000013078	Zcchc7	62	68.222	ENSPVAG00000005870	-	100	67.251	Pteropus_vampyrus
ENSRNOG00000013078	Zcchc7	75	36.617	ENSPNYG00000023260	zcchc7	70	38.495	Pundamilia_nyererei
ENSRNOG00000013078	Zcchc7	99	31.373	ENSPNAG00000018219	zcchc7	99	31.716	Pygocentrus_nattereri
ENSRNOG00000013078	Zcchc7	99	64.022	ENSRBIG00000034561	ZCCHC7	99	63.284	Rhinopithecus_bieti
ENSRNOG00000013078	Zcchc7	99	63.653	ENSRROG00000045031	ZCCHC7	99	62.915	Rhinopithecus_roxellana
ENSRNOG00000013078	Zcchc7	99	61.624	ENSSBOG00000025850	ZCCHC7	99	62.177	Saimiri_boliviensis_boliviensis
ENSRNOG00000013078	Zcchc7	99	56.204	ENSSHAG00000014544	ZCCHC7	99	55.941	Sarcophilus_harrisii
ENSRNOG00000013078	Zcchc7	99	35.456	ENSSFOG00015008796	zcchc7	99	36.317	Scleropages_formosus
ENSRNOG00000013078	Zcchc7	53	34.740	ENSSMAG00000001010	-	62	34.416	Scophthalmus_maximus
ENSRNOG00000013078	Zcchc7	99	67.518	ENSSARG00000002111	ZCCHC7	99	67.701	Sorex_araneus
ENSRNOG00000013078	Zcchc7	50	36.735	ENSSPAG00000015493	-	63	36.306	Stegastes_partitus
ENSRNOG00000013078	Zcchc7	99	71.691	ENSSSCG00000005346	ZCCHC7	99	71.691	Sus_scrofa
ENSRNOG00000013078	Zcchc7	75	34.829	ENSTRUG00000021124	zcchc7	86	32.734	Takifugu_rubripes
ENSRNOG00000013078	Zcchc7	56	36.111	ENSTNIG00000004441	-	98	37.383	Tetraodon_nigroviridis
ENSRNOG00000013078	Zcchc7	99	69.074	ENSTBEG00000008439	ZCCHC7	99	69.074	Tupaia_belangeri
ENSRNOG00000013078	Zcchc7	99	68.508	ENSTTRG00000006054	ZCCHC7	99	68.508	Tursiops_truncatus
ENSRNOG00000013078	Zcchc7	99	72.978	ENSUMAG00000011473	ZCCHC7	99	72.978	Ursus_maritimus
ENSRNOG00000013078	Zcchc7	73	77.945	ENSVPAG00000001007	ZCCHC7	99	77.945	Vicugna_pacos
ENSRNOG00000013078	Zcchc7	83	78.097	ENSVVUG00000019974	ZCCHC7	99	77.925	Vulpes_vulpes
ENSRNOG00000013078	Zcchc7	74	46.697	ENSXETG00000006542	zcchc7	99	40.625	Xenopus_tropicalis
ENSRNOG00000013078	Zcchc7	75	36.342	ENSXMAG00000012691	zcchc7	81	35.748	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008270	zinc ion binding	-	IEA	Function