EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000013456 (Gene tree)
Gene ID
29532
Gene Symbol
Ighmbp2
Alias
AEP|MGC124598
Full Name
immunoglobulin mu DNA binding protein 2
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
23193 bases
Position
chr1:218508950-218532142
Accession
68325
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000069586R3HPF01424.229.3e-1311
ENSRNOP00000018487R3HPF01424.221.1e-1211
ENSRNOP00000069586ResIIIPF04851.151.4e-0611
ENSRNOP00000018487ResIIIPF04851.152.1e-0611
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000086385-3495-ENSRNOP00000069586869 (aa)-A0A0G2JVR3
ENSRNOT00000018487-3711-ENSRNOP000000184871003 (aa)-F1LQE6
Gene Model
Click here to download ENSRNOG00000013456's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013456's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000013456Ighmbp29977.423ENSG00000132740IGHMBP210079.310Homo_sapiens
ENSRNOG00000013456Ighmbp29858.782ENSAPOG00000009399ighmbp29958.717Acanthochromis_polyacanthus
ENSRNOG00000013456Ighmbp29776.631ENSAMEG00000008568IGHMBP210074.700Ailuropoda_melanoleuca
ENSRNOG00000013456Ighmbp29959.060ENSACIG00000004670ighmbp29959.394Amphilophus_citrinellus
ENSRNOG00000013456Ighmbp29858.800ENSAOCG00000019390ighmbp29958.659Amphiprion_ocellaris
ENSRNOG00000013456Ighmbp29859.082ENSAPEG00000021713ighmbp29958.982Amphiprion_percula
ENSRNOG00000013456Ighmbp29858.736ENSATEG00000010246ighmbp29659.082Anabas_testudineus
ENSRNOG00000013456Ighmbp29663.583ENSAPLG00000003251IGHMBP210065.026Anas_platyrhynchos
ENSRNOG00000013456Ighmbp29860.508ENSACAG00000013702IGHMBP29960.904Anolis_carolinensis
ENSRNOG00000013456Ighmbp29977.077ENSANAG00000027309IGHMBP210076.939Aotus_nancymaae
ENSRNOG00000013456Ighmbp29858.693ENSACLG00000014140ighmbp29958.593Astatotilapia_calliptera
ENSRNOG00000013456Ighmbp29959.015ENSAMXG00000000503ighmbp29958.668Astyanax_mexicanus
ENSRNOG00000013456Ighmbp29973.038ENSBTAG00000022185IGHMBP29973.494Bos_taurus
ENSRNOG00000013456Ighmbp29975.172ENSCJAG00000015887IGHMBP29475.716Callithrix_jacchus
ENSRNOG00000013456Ighmbp29974.914ENSCAFG00000010745IGHMBP210074.651Canis_familiaris
ENSRNOG00000013456Ighmbp26870.506ENSCAFG00020015362IGHMBP28969.317Canis_lupus_dingo
ENSRNOG00000013456Ighmbp29974.315ENSCHIG00000011703IGHMBP29973.926Capra_hircus
ENSRNOG00000013456Ighmbp29777.393ENSCAPG00000001471IGHMBP29975.405Cavia_aperea
ENSRNOG00000013456Ighmbp29878.327ENSCPOG00000007063IGHMBP29476.707Cavia_porcellus
ENSRNOG00000013456Ighmbp29975.688ENSCCAG00000027106IGHMBP29976.024Cebus_capucinus
ENSRNOG00000013456Ighmbp29967.832ENSCATG00000031229IGHMBP210067.940Cercocebus_atys
ENSRNOG00000013456Ighmbp29878.147ENSCLAG00000015500IGHMBP29977.241Chinchilla_lanigera
ENSRNOG00000013456Ighmbp29975.622ENSCSAG00000009185IGHMBP210075.251Chlorocebus_sabaeus
ENSRNOG00000013456Ighmbp29667.138ENSCPBG00000008799IGHMBP29965.134Chrysemys_picta_bellii
ENSRNOG00000013456Ighmbp29147.884ENSCING00000005102zf(an1/a20like)-28649.689Ciona_intestinalis
ENSRNOG00000013456Ighmbp29845.581ENSCSAVG00000006222-9945.581Ciona_savignyi
ENSRNOG00000013456Ighmbp29975.622ENSCANG00000043714IGHMBP210075.201Colobus_angolensis_palliatus
ENSRNOG00000013456Ighmbp210090.263ENSCGRG00001019126Ighmbp210091.221Cricetulus_griseus_chok1gshd
ENSRNOG00000013456Ighmbp29991.221ENSCGRG00000009642Ighmbp210091.221Cricetulus_griseus_crigri
ENSRNOG00000013456Ighmbp29857.816ENSCSEG00000007513ighmbp29957.300Cynoglossus_semilaevis
ENSRNOG00000013456Ighmbp29660.190ENSCVAG00000007876ighmbp29960.083Cyprinodon_variegatus
ENSRNOG00000013456Ighmbp29660.287ENSDARG00000069274ighmbp29957.157Danio_rerio
ENSRNOG00000013456Ighmbp29774.721ENSDNOG00000002334IGHMBP210073.690Dasypus_novemcinctus
ENSRNOG00000013456Ighmbp29670.374ENSDORG00000026350Ighmbp210070.228Dipodomys_ordii
ENSRNOG00000013456Ighmbp29269.253ENSETEG00000003178IGHMBP29369.253Echinops_telfairi
ENSRNOG00000013456Ighmbp29653.271ENSEBUG00000010471ighmbp29951.900Eptatretus_burgeri
ENSRNOG00000013456Ighmbp29974.138ENSEASG00005007735IGHMBP210074.551Equus_asinus_asinus
ENSRNOG00000013456Ighmbp29974.306ENSECAG00000019360IGHMBP29874.455Equus_caballus
ENSRNOG00000013456Ighmbp29858.035ENSELUG00000023450ighmbp29957.487Esox_lucius
ENSRNOG00000013456Ighmbp29872.863ENSFCAG00000010879IGHMBP210072.052Felis_catus
ENSRNOG00000013456Ighmbp29859.039ENSFALG00000011604IGHMBP29961.499Ficedula_albicollis
ENSRNOG00000013456Ighmbp29184.025ENSFDAG00000005011IGHMBP29284.025Fukomys_damarensis
ENSRNOG00000013456Ighmbp29859.940ENSFHEG00000021211ighmbp29959.980Fundulus_heteroclitus
ENSRNOG00000013456Ighmbp29856.746ENSGMOG00000017553ighmbp29957.143Gadus_morhua
ENSRNOG00000013456Ighmbp29365.568ENSGALG00000004328IGHMBP29963.992Gallus_gallus
ENSRNOG00000013456Ighmbp29858.449ENSGAFG00000020770ighmbp29958.358Gambusia_affinis
ENSRNOG00000013456Ighmbp29857.662ENSGACG00000005293ighmbp29958.350Gasterosteus_aculeatus
ENSRNOG00000013456Ighmbp29864.770ENSGAGG00000020312IGHMBP29364.462Gopherus_agassizii
ENSRNOG00000013456Ighmbp29977.313ENSGGOG00000012131IGHMBP210075.845Gorilla_gorilla
ENSRNOG00000013456Ighmbp29858.375ENSHBUG00000018318ighmbp29958.593Haplochromis_burtoni
ENSRNOG00000013456Ighmbp29877.543ENSHGLG00000006468IGHMBP29976.253Heterocephalus_glaber_female
ENSRNOG00000013456Ighmbp29877.442ENSHGLG00100009290IGHMBP29976.152Heterocephalus_glaber_male
ENSRNOG00000013456Ighmbp29858.569ENSHCOG00000018786ighmbp29958.569Hippocampus_comes
ENSRNOG00000013456Ighmbp29856.873ENSIPUG00000023036ighmbp29956.479Ictalurus_punctatus
ENSRNOG00000013456Ighmbp29676.471ENSSTOG00000003792IGHMBP29080.000Ictidomys_tridecemlineatus
ENSRNOG00000013456Ighmbp29982.731ENSJJAG00000022964Ighmbp210082.731Jaculus_jaculus
ENSRNOG00000013456Ighmbp29858.527ENSKMAG00000020284ighmbp29958.847Kryptolebias_marmoratus
ENSRNOG00000013456Ighmbp29957.727ENSLBEG00000014501ighmbp29957.440Labrus_bergylta
ENSRNOG00000013456Ighmbp29759.880ENSLACG00000018792IGHMBP29959.980Latimeria_chalumnae
ENSRNOG00000013456Ighmbp29957.600ENSLOCG00000001512ighmbp29957.926Lepisosteus_oculatus
ENSRNOG00000013456Ighmbp27571.242ENSLAFG00000022445IGHMBP210070.235Loxodonta_africana
ENSRNOG00000013456Ighmbp29975.872ENSMFAG00000043909IGHMBP210075.502Macaca_fascicularis
ENSRNOG00000013456Ighmbp29972.582ENSMNEG00000043511IGHMBP210072.088Macaca_nemestrina
ENSRNOG00000013456Ighmbp29975.872ENSMLEG00000043529IGHMBP210075.502Mandrillus_leucophaeus
ENSRNOG00000013456Ighmbp29858.097ENSMAMG00000005532ighmbp29958.097Mastacembelus_armatus
ENSRNOG00000013456Ighmbp29858.794ENSMZEG00005000665ighmbp29958.693Maylandia_zebra
ENSRNOG00000013456Ighmbp29365.690ENSMGAG00000002792IGHMBP29964.393Meleagris_gallopavo
ENSRNOG00000013456Ighmbp29990.111ENSMAUG00000019893Ighmbp210089.080Mesocricetus_auratus
ENSRNOG00000013456Ighmbp29975.057ENSMICG00000043944IGHMBP29981.435Microcebus_murinus
ENSRNOG00000013456Ighmbp29990.212ENSMOCG00000018939Ighmbp210090.212Microtus_ochrogaster
ENSRNOG00000013456Ighmbp29857.634ENSMMOG00000001234ighmbp29958.189Mola_mola
ENSRNOG00000013456Ighmbp29965.095ENSMODG00000004040IGHMBP28964.032Monodelphis_domestica
ENSRNOG00000013456Ighmbp29958.161ENSMALG00000006457ighmbp29957.555Monopterus_albus
ENSRNOG00000013456Ighmbp29992.036MGP_CAROLIEiJ_G0022463Ighmbp210092.339Mus_caroli
ENSRNOG00000013456Ighmbp210091.648ENSMUSG00000024831Ighmbp210092.145Mus_musculus
ENSRNOG00000013456Ighmbp210093.463MGP_PahariEiJ_G0013960Ighmbp210093.441Mus_pahari
ENSRNOG00000013456Ighmbp210091.991MGP_SPRETEiJ_G0014700Ighmbp29894.475Mus_spretus
ENSRNOG00000013456Ighmbp29672.959ENSMPUG00000004439IGHMBP210072.783Mustela_putorius_furo
ENSRNOG00000013456Ighmbp29980.866ENSNGAG00000006566Ighmbp210081.187Nannospalax_galili
ENSRNOG00000013456Ighmbp29660.048ENSNBRG00000014911ighmbp29958.030Neolamprologus_brichardi
ENSRNOG00000013456Ighmbp29971.972ENSNLEG00000006609IGHMBP210071.601Nomascus_leucogenys
ENSRNOG00000013456Ighmbp26360.062ENSOPRG00000011904-9960.127Ochotona_princeps
ENSRNOG00000013456Ighmbp29877.588ENSODEG00000017354IGHMBP29976.915Octodon_degus
ENSRNOG00000013456Ighmbp29858.746ENSONIG00000015506ighmbp29958.948Oreochromis_niloticus
ENSRNOG00000013456Ighmbp29857.669ENSORLG00000006561ighmbp29957.974Oryzias_latipes
ENSRNOG00000013456Ighmbp29858.039ENSORLG00020008462ighmbp29958.158Oryzias_latipes_hni
ENSRNOG00000013456Ighmbp29856.418ENSORLG00015001563ighmbp29956.683Oryzias_latipes_hsok
ENSRNOG00000013456Ighmbp29958.428ENSOMEG00000019296ighmbp29958.672Oryzias_melastigma
ENSRNOG00000013456Ighmbp29972.531ENSOGAG00000011671IGHMBP29972.590Otolemur_garnettii
ENSRNOG00000013456Ighmbp29670.035ENSOARG00000016959IGHMBP29969.637Ovis_aries
ENSRNOG00000013456Ighmbp29977.512ENSPPAG00000027355IGHMBP210076.143Pan_paniscus
ENSRNOG00000013456Ighmbp29873.287ENSPPRG00000024194IGHMBP210073.273Panthera_pardus
ENSRNOG00000013456Ighmbp29977.711ENSPTRG00000003989IGHMBP210076.977Pan_troglodytes
ENSRNOG00000013456Ighmbp29972.183ENSPANG00000023650IGHMBP210071.787Papio_anubis
ENSRNOG00000013456Ighmbp29858.247ENSPKIG00000019306ighmbp29956.830Paramormyrops_kingsleyae
ENSRNOG00000013456Ighmbp29367.491ENSPSIG00000015808IGHMBP210064.699Pelodiscus_sinensis
ENSRNOG00000013456Ighmbp29990.111ENSPEMG00000017775Ighmbp210090.111Peromyscus_maniculatus_bairdii
ENSRNOG00000013456Ighmbp29369.732ENSPCIG00000011064IGHMBP28772.807Phascolarctos_cinereus
ENSRNOG00000013456Ighmbp29858.517ENSPFOG00000010607ighmbp29958.959Poecilia_formosa
ENSRNOG00000013456Ighmbp29858.717ENSPLAG00000003917ighmbp29958.765Poecilia_latipinna
ENSRNOG00000013456Ighmbp29858.515ENSPMEG00000021063ighmbp29958.713Poecilia_mexicana
ENSRNOG00000013456Ighmbp29858.882ENSPREG00000011223ighmbp29958.900Poecilia_reticulata
ENSRNOG00000013456Ighmbp26572.659ENSPPYG00000002965-10070.852Pongo_abelii
ENSRNOG00000013456Ighmbp25575.385ENSPCAG00000003490-5575.385Procavia_capensis
ENSRNOG00000013456Ighmbp29873.615ENSPCOG00000018759IGHMBP29974.220Propithecus_coquereli
ENSRNOG00000013456Ighmbp29069.759ENSPVAG00000012921IGHMBP210068.683Pteropus_vampyrus
ENSRNOG00000013456Ighmbp29858.794ENSPNYG00000015003ighmbp29958.693Pundamilia_nyererei
ENSRNOG00000013456Ighmbp29759.070ENSPNAG00000013815ighmbp29957.692Pygocentrus_nattereri
ENSRNOG00000013456Ighmbp29975.673ENSRBIG00000044249IGHMBP210075.502Rhinopithecus_bieti
ENSRNOG00000013456Ighmbp29976.072ENSRROG00000045646IGHMBP210075.904Rhinopithecus_roxellana
ENSRNOG00000013456Ighmbp27234.712YKL017CHCS19835.119Saccharomyces_cerevisiae
ENSRNOG00000013456Ighmbp29972.372ENSSBOG00000021342IGHMBP210072.306Saimiri_boliviensis_boliviensis
ENSRNOG00000013456Ighmbp27560.997ENSSHAG00000001585-9960.691Sarcophilus_harrisii
ENSRNOG00000013456Ighmbp29856.970ENSSFOG00015016074ighmbp29256.463Scleropages_formosus
ENSRNOG00000013456Ighmbp29958.182ENSSMAG00000013687ighmbp29957.895Scophthalmus_maximus
ENSRNOG00000013456Ighmbp29857.789ENSSDUG00000013150ighmbp29958.425Seriola_dumerili
ENSRNOG00000013456Ighmbp29858.576ENSSLDG00000023119ighmbp29958.717Seriola_lalandi_dorsalis
ENSRNOG00000013456Ighmbp26361.550ENSSPUG00000008810IGHMBP29960.091Sphenodon_punctatus
ENSRNOG00000013456Ighmbp29858.417ENSSPAG00000011541ighmbp29958.358Stegastes_partitus
ENSRNOG00000013456Ighmbp29971.134ENSSSCG00000012878IGHMBP29971.098Sus_scrofa
ENSRNOG00000013456Ighmbp29662.222ENSTGUG00000006705-10063.374Taeniopygia_guttata
ENSRNOG00000013456Ighmbp29858.103ENSTRUG00000003491ighmbp29958.026Takifugu_rubripes
ENSRNOG00000013456Ighmbp29957.208ENSTNIG00000016069ighmbp29957.185Tetraodon_nigroviridis
ENSRNOG00000013456Ighmbp29068.839ENSTBEG00000017260IGHMBP28783.673Tupaia_belangeri
ENSRNOG00000013456Ighmbp28680.932ENSTTRG00000013636IGHMBP28880.932Tursiops_truncatus
ENSRNOG00000013456Ighmbp29775.939ENSUAMG00000024817IGHMBP210073.982Ursus_americanus
ENSRNOG00000013456Ighmbp29872.323ENSUMAG00000018347IGHMBP29971.342Ursus_maritimus
ENSRNOG00000013456Ighmbp29973.483ENSVVUG00000004811IGHMBP210073.695Vulpes_vulpes
ENSRNOG00000013456Ighmbp29062.923ENSXETG00000031258IGHMBP210062.773Xenopus_tropicalis
ENSRNOG00000013456Ighmbp29858.276ENSXCOG00000003758ighmbp29958.566Xiphophorus_couchianus
ENSRNOG00000013456Ighmbp29858.283ENSXMAG00000003705ighmbp29958.700Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000049tRNA binding-IEAFunction
GO:0000049tRNA binding-ISOFunction
GO:0000049tRNA binding-ISSFunction
GO:0000122negative regulation of transcription by RNA polymerase II15358184.IDAProcess
GO:0000122negative regulation of transcription by RNA polymerase II-ISOProcess
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding15358184.IDAFunction
GO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specific15358184.IDAFunction
GO:0003677DNA binding15358184.IDAFunction
GO:0003677DNA binding-IEAFunction
GO:0003677DNA binding-ISOFunction
GO:0003723RNA binding-ISOFunction
GO:0003723RNA binding-ISSFunction
GO:0005524ATP binding-IEAFunction
GO:0005524ATP binding-ISOFunction
GO:0005524ATP binding-ISSFunction
GO:0005634nucleus-IEAComponent
GO:0005634nucleus-ISOComponent
GO:0005634nucleus-ISSComponent
GO:0005737cytoplasm-IEAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005737cytoplasm-ISSComponent
GO:0008094DNA-dependent ATPase activity-ISOFunction
GO:0008094DNA-dependent ATPase activity-ISSFunction
GO:0008134transcription factor binding-IEAFunction
GO:0008134transcription factor binding-ISOFunction
GO:0008186RNA-dependent ATPase activity-ISOFunction
GO:0008186RNA-dependent ATPase activity-ISSFunction
GO:0008270zinc ion binding-IEAFunction
GO:0021522spinal cord motor neuron differentiation-ISOProcess
GO:0030424axon-IEAComponent
GO:0030424axon-ISOComponent
GO:0030426growth cone-ISOComponent
GO:0032508DNA duplex unwinding-IEAProcess
GO:0032575ATP-dependent 5'-3' RNA helicase activity-IEAFunction
GO:0032575ATP-dependent 5'-3' RNA helicase activity-ISOFunction
GO:0032575ATP-dependent 5'-3' RNA helicase activity-ISSFunction
GO:0043022ribosome binding-IEAFunction
GO:0043022ribosome binding-ISOFunction
GO:0043022ribosome binding-ISSFunction
GO:0043025neuronal cell body-ISOComponent
GO:0043141ATP-dependent 5'-3' DNA helicase activity-IEAFunction
GO:0043141ATP-dependent 5'-3' DNA helicase activity-ISOFunction
GO:0043141ATP-dependent 5'-3' DNA helicase activity-ISSFunction
GO:0043621protein self-association-ISSFunction
GO:0048471perinuclear region of cytoplasm-ISOComponent
GO:0050905neuromuscular process-ISOProcess
GO:0051260protein homooligomerization-IEAProcess
GO:0051260protein homooligomerization-ISOProcess
GO:1990904ribonucleoprotein complex-ISOComponent
GO:1990955G-rich single-stranded DNA binding-ISOFunction

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