EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000013533 (Gene tree)
Gene ID: 305884
Gene Symbol: Acin1
Alias: LOC305884
Full Name: apoptotic chromatin condensation inducer 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 45044 bases
Position: chr15:33288374-33333417
Accession: 1311945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000018982	SAP	PF02037.27	6e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000018982	-	4780	XM_006251958	ENSRNOP00000018982	1339 (aa)	XP_006252020	E9PST5

Gene Model

Click here to download ENSRNOG00000013533's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG
rno03015	mRNA surveillance pathway	KEGG
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013533	Acin1	100	86.543	ENSG00000100813	ACIN1	96	84.925	Homo_sapiens
ENSRNOG00000013533	Acin1	100	85.905	ENSAMEG00000007576	ACIN1	93	84.844	Ailuropoda_melanoleuca
ENSRNOG00000013533	Acin1	100	84.712	ENSANAG00000034343	ACIN1	92	84.720	Aotus_nancymaae
ENSRNOG00000013533	Acin1	100	85.417	ENSBTAG00000011571	ACIN1	99	85.113	Bos_taurus
ENSRNOG00000013533	Acin1	100	85.449	ENSCJAG00000008076	ACIN1	93	85.245	Callithrix_jacchus
ENSRNOG00000013533	Acin1	100	84.918	ENSCAFG00000011427	ACIN1	93	84.831	Canis_familiaris
ENSRNOG00000013533	Acin1	100	84.844	ENSCAFG00020007637	ACIN1	93	84.751	Canis_lupus_dingo
ENSRNOG00000013533	Acin1	100	85.268	ENSCHIG00000017602	ACIN1	93	84.968	Capra_hircus
ENSRNOG00000013533	Acin1	100	85.152	ENSTSYG00000011584	ACIN1	93	84.683	Carlito_syrichta
ENSRNOG00000013533	Acin1	99	84.846	ENSCPOG00000027234	ACIN1	92	84.185	Cavia_porcellus
ENSRNOG00000013533	Acin1	100	85.799	ENSCCAG00000029776	ACIN1	93	85.141	Cebus_capucinus
ENSRNOG00000013533	Acin1	100	86.979	ENSCATG00000044489	ACIN1	93	86.254	Cercocebus_atys
ENSRNOG00000013533	Acin1	99	84.535	ENSCLAG00000010588	ACIN1	100	84.858	Chinchilla_lanigera
ENSRNOG00000013533	Acin1	100	85.651	ENSCSAG00000016098	ACIN1	93	85.060	Chlorocebus_sabaeus
ENSRNOG00000013533	Acin1	64	80.880	ENSCHOG00000006414	ACIN1	79	80.243	Choloepus_hoffmanni
ENSRNOG00000013533	Acin1	100	86.756	ENSCANG00000032999	ACIN1	93	86.013	Colobus_angolensis_palliatus
ENSRNOG00000013533	Acin1	100	90.902	ENSCGRG00001010945	Acin1	100	91.750	Cricetulus_griseus_chok1gshd
ENSRNOG00000013533	Acin1	100	88.963	ENSCGRG00000012504	Acin1	100	88.591	Cricetulus_griseus_crigri
ENSRNOG00000013533	Acin1	99	82.554	ENSDNOG00000047667	ACIN1	92	81.636	Dasypus_novemcinctus
ENSRNOG00000013533	Acin1	99	74.833	ENSETEG00000000033	ACIN1	88	94.175	Echinops_telfairi
ENSRNOG00000013533	Acin1	100	85.863	ENSEASG00005011704	ACIN1	93	85.450	Equus_asinus_asinus
ENSRNOG00000013533	Acin1	100	85.789	ENSECAG00000021097	ACIN1	93	85.370	Equus_caballus
ENSRNOG00000013533	Acin1	100	85.204	ENSFCAG00000002332	ACIN1	93	84.257	Felis_catus
ENSRNOG00000013533	Acin1	100	84.148	ENSFDAG00000011979	ACIN1	92	84.671	Fukomys_damarensis
ENSRNOG00000013533	Acin1	100	82.764	ENSGGOG00000007403	ACIN1	92	81.380	Gorilla_gorilla
ENSRNOG00000013533	Acin1	99	84.211	ENSHGLG00000018997	-	92	84.250	Heterocephalus_glaber_female
ENSRNOG00000013533	Acin1	99	81.504	ENSHGLG00100018921	-	92	79.871	Heterocephalus_glaber_male
ENSRNOG00000013533	Acin1	97	85.023	ENSSTOG00000007169	ACIN1	92	84.775	Ictidomys_tridecemlineatus
ENSRNOG00000013533	Acin1	100	83.680	ENSLAFG00000003679	ACIN1	93	82.772	Loxodonta_africana
ENSRNOG00000013533	Acin1	100	86.979	ENSMFAG00000044437	ACIN1	93	86.254	Macaca_fascicularis
ENSRNOG00000013533	Acin1	100	86.979	ENSMMUG00000012979	ACIN1	93	86.254	Macaca_mulatta
ENSRNOG00000013533	Acin1	100	85.863	ENSMNEG00000035938	ACIN1	93	85.048	Macaca_nemestrina
ENSRNOG00000013533	Acin1	100	86.830	ENSMLEG00000036983	ACIN1	93	86.093	Mandrillus_leucophaeus
ENSRNOG00000013533	Acin1	100	86.458	ENSMICG00000002575	ACIN1	93	86.174	Microcebus_murinus
ENSRNOG00000013533	Acin1	94	69.309	ENSMODG00000005083	ACIN1	97	68.395	Monodelphis_domestica
ENSRNOG00000013533	Acin1	100	92.612	MGP_CAROLIEiJ_G0019267	Acin1	100	92.985	Mus_caroli
ENSRNOG00000013533	Acin1	100	92.692	ENSMUSG00000022185	Acin1	100	92.767	Mus_musculus
ENSRNOG00000013533	Acin1	100	92.756	MGP_PahariEiJ_G0030286	Acin1	100	92.756	Mus_pahari
ENSRNOG00000013533	Acin1	100	92.692	MGP_SPRETEiJ_G0020157	Acin1	100	92.767	Mus_spretus
ENSRNOG00000013533	Acin1	97	84.804	ENSMPUG00000006822	ACIN1	92	84.954	Mustela_putorius_furo
ENSRNOG00000013533	Acin1	100	85.375	ENSNLEG00000014920	ACIN1	93	84.844	Nomascus_leucogenys
ENSRNOG00000013533	Acin1	81	67.880	ENSMEUG00000015219	ACIN1	99	67.637	Notamacropus_eugenii
ENSRNOG00000013533	Acin1	86	94.161	ENSOPRG00000016402	ACIN1	86	90.845	Ochotona_princeps
ENSRNOG00000013533	Acin1	92	84.871	ENSOCUG00000001678	ACIN1	93	84.609	Oryctolagus_cuniculus
ENSRNOG00000013533	Acin1	99	84.336	ENSOGAG00000012605	ACIN1	91	84.727	Otolemur_garnettii
ENSRNOG00000013533	Acin1	100	83.878	ENSOARG00000019368	ACIN1	92	83.066	Ovis_aries
ENSRNOG00000013533	Acin1	100	85.513	ENSPPAG00000041392	ACIN1	93	84.831	Pan_paniscus
ENSRNOG00000013533	Acin1	100	85.576	ENSPPRG00000006713	ACIN1	92	84.257	Panthera_pardus
ENSRNOG00000013533	Acin1	100	85.290	ENSPTIG00000021540	ACIN1	92	84.980	Panthera_tigris_altaica
ENSRNOG00000013533	Acin1	100	85.523	ENSPTRG00000006159	ACIN1	93	85.004	Pan_troglodytes
ENSRNOG00000013533	Acin1	100	86.821	ENSPANG00000019644	ACIN1	93	86.002	Papio_anubis
ENSRNOG00000013533	Acin1	88	71.189	ENSPCIG00000027763	ACIN1	92	70.475	Phascolarctos_cinereus
ENSRNOG00000013533	Acin1	100	84.301	ENSPPYG00000005657	ACIN1	92	84.084	Pongo_abelii
ENSRNOG00000013533	Acin1	92	75.243	ENSPCAG00000006599	ACIN1	92	75.081	Procavia_capensis
ENSRNOG00000013533	Acin1	100	86.682	ENSPCOG00000002308	ACIN1	93	86.013	Propithecus_coquereli
ENSRNOG00000013533	Acin1	99	85.257	ENSPVAG00000013806	ACIN1	92	83.910	Pteropus_vampyrus
ENSRNOG00000013533	Acin1	100	84.695	ENSRBIG00000031308	ACIN1	93	84.270	Rhinopithecus_bieti
ENSRNOG00000013533	Acin1	100	86.468	ENSRROG00000003676	ACIN1	93	85.703	Rhinopithecus_roxellana
ENSRNOG00000013533	Acin1	100	85.767	ENSSBOG00000032127	ACIN1	93	85.028	Saimiri_boliviensis_boliviensis
ENSRNOG00000013533	Acin1	97	86.000	ENSSSCG00000002034	ACIN1	92	85.417	Sus_scrofa
ENSRNOG00000013533	Acin1	62	68.889	ENSTBEG00000016605	-	85	95.192	Tupaia_belangeri
ENSRNOG00000013533	Acin1	92	85.323	ENSUAMG00000024475	ACIN1	99	85.403	Ursus_americanus
ENSRNOG00000013533	Acin1	92	85.427	ENSUMAG00000014156	ACIN1	100	86.022	Ursus_maritimus
ENSRNOG00000013533	Acin1	100	85.417	ENSVVUG00000019885	ACIN1	93	85.289	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0030218	erythrocyte differentiation	-	IEA	Process
GO:0030218	erythrocyte differentiation	-	ISO	Process
GO:0030263	apoptotic chromosome condensation	-	IEA	Process
GO:0030263	apoptotic chromosome condensation	-	ISO	Process
GO:0035145	exon-exon junction complex	-	ISO	Component
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0045657	positive regulation of monocyte differentiation	-	IEA	Process
GO:0045657	positive regulation of monocyte differentiation	-	ISO	Process
GO:0048025	negative regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0061574	ASAP complex	-	IEA	Component
GO:0061574	ASAP complex	-	ISO	Component