EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000013545 (Gene tree)
Gene ID
690966
Gene Symbol
Polr2e
Alias
LOC690966|RPB5
Full Name
RNA polymerase II subunit E
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
3897 bases
Position
chr7:12532895-12536791
Accession
1589817
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000018169RNA_pol_Rpb5_NPF03871.148.3e-3511
ENSRNOP00000076239RNA_pol_Rpb5_NPF03871.148.3e-3511
ENSRNOP00000076166RNA_pol_Rpb5_NPF03871.141.3e-2511
ENSRNOP00000018169RNA_pol_Rpb5_CPF01191.197.4e-3511
ENSRNOP00000076239RNA_pol_Rpb5_CPF01191.197.4e-3511
ENSRNOP00000076166RNA_pol_Rpb5_CPF01191.199.6e-3511
ENSRNOP00000076102RNA_pol_Rpb5_CPF01191.191.6e-1511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000093413-839-ENSRNOP00000076239210 (aa)-B0BNE2
ENSRNOT00000093135-537-ENSRNOP0000007610297 (aa)-A0A1W2Q620
ENSRNOT00000093599-1123XM_006241010ENSRNOP00000076166202 (aa)XP_006241072A0A1W2Q690
ENSRNOT00000018169-1056XM_006241009ENSRNOP00000018169210 (aa)XP_006241071B0BNE2
ENSRNOT00000093703-262-ENSRNOP000000762933 (aa)-UPI00097CE40D
Gene Model
Click here to download ENSRNOG00000013545's gene model file
Pathways
Pathway IDPathway NameSource
rno03020RNA polymeraseKEGG
rno04623Cytosolic DNA-sensing pathwayKEGG
rno05016Huntington diseaseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013545's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000013545Polr2e10098.571ENSG00000099817POLR2E10098.571Homo_sapiens
ENSRNOG00000013545Polr2e10095.714ENSAPOG00000002935polr2eb10095.714Acanthochromis_polyacanthus
ENSRNOG00000013545Polr2e10099.048ENSAMEG00000003159POLR2E10099.048Ailuropoda_melanoleuca
ENSRNOG00000013545Polr2e10083.810ENSACIG00000024371polr2eb10083.810Amphilophus_citrinellus
ENSRNOG00000013545Polr2e10095.714ENSAOCG00000018166polr2eb10095.714Amphiprion_ocellaris
ENSRNOG00000013545Polr2e10095.714ENSAPEG00000009000polr2eb10095.714Amphiprion_percula
ENSRNOG00000013545Polr2e10095.714ENSATEG00000023760polr2eb10095.714Anabas_testudineus
ENSRNOG00000013545Polr2e10099.048ENSANAG00000038488POLR2E10099.048Aotus_nancymaae
ENSRNOG00000013545Polr2e10096.190ENSACLG00000005254polr2eb10096.190Astatotilapia_calliptera
ENSRNOG00000013545Polr2e10096.190ENSAMXG00000018915POLR2E10096.190Astyanax_mexicanus
ENSRNOG00000013545Polr2e10099.048ENSBTAG00000020776POLR2E10099.048Bos_taurus
ENSRNOG00000013545Polr2e9978.365WBGene00019246rpb-59978.365Caenorhabditis_elegans
ENSRNOG00000013545Polr2e6994.286ENSCJAG00000007666-7794.286Callithrix_jacchus
ENSRNOG00000013545Polr2e10095.714ENSCAFG00000019546POLR2E10095.714Canis_familiaris
ENSRNOG00000013545Polr2e10099.048ENSCAFG00020017111POLR2E10099.048Canis_lupus_dingo
ENSRNOG00000013545Polr2e10099.048ENSCHIG00000014151POLR2E10099.048Capra_hircus
ENSRNOG00000013545Polr2e10080.930ENSTSYG00000026377POLR2E10080.930Carlito_syrichta
ENSRNOG00000013545Polr2e9995.500ENSCAPG00000010843POLR2E9795.500Cavia_aperea
ENSRNOG00000013545Polr2e10099.048ENSCPOG00000001542POLR2E10099.048Cavia_porcellus
ENSRNOG00000013545Polr2e10099.048ENSCCAG00000025658POLR2E10099.048Cebus_capucinus
ENSRNOG00000013545Polr2e10099.048ENSCATG00000008926POLR2E10099.048Cercocebus_atys
ENSRNOG00000013545Polr2e9875.610ENSCLAG00000009238-10075.610Chinchilla_lanigera
ENSRNOG00000013545Polr2e10098.571ENSCLAG00000014874-10098.571Chinchilla_lanigera
ENSRNOG00000013545Polr2e10099.048ENSCSAG00000012336POLR2E10099.048Chlorocebus_sabaeus
ENSRNOG00000013545Polr2e10098.571ENSCPBG00000009702POLR2E10098.571Chrysemys_picta_bellii
ENSRNOG00000013545Polr2e10085.714ENSCING00000024933-9985.714Ciona_intestinalis
ENSRNOG00000013545Polr2e10099.048ENSCANG00000025560POLR2E10099.048Colobus_angolensis_palliatus
ENSRNOG00000013545Polr2e100100.000ENSCGRG00001022927Polr2e100100.000Cricetulus_griseus_chok1gshd
ENSRNOG00000013545Polr2e10093.488ENSCGRG00000016441Polr2e10093.488Cricetulus_griseus_crigri
ENSRNOG00000013545Polr2e10094.762ENSCSEG00000007107polr2eb9294.762Cynoglossus_semilaevis
ENSRNOG00000013545Polr2e10095.714ENSCVAG00000019940polr2eb10095.714Cyprinodon_variegatus
ENSRNOG00000013545Polr2e10094.762ENSDARG00000026183polr2eb10094.762Danio_rerio
ENSRNOG00000013545Polr2e9098.947ENSDNOG00000044994POLR2E8498.947Dasypus_novemcinctus
ENSRNOG00000013545Polr2e10099.048ENSDORG00000001154Polr2e10099.048Dipodomys_ordii
ENSRNOG00000013545Polr2e9984.689FBgn0033571Rpb59984.689Drosophila_melanogaster
ENSRNOG00000013545Polr2e7591.083ENSEBUG00000010159-7691.083Eptatretus_burgeri
ENSRNOG00000013545Polr2e7292.414ENSEASG00005021615POLR2E6786.420Equus_asinus_asinus
ENSRNOG00000013545Polr2e9197.906ENSECAG00000011124POLR2E10086.667Equus_caballus
ENSRNOG00000013545Polr2e10093.333ENSELUG00000020646polr2e10093.333Esox_lucius
ENSRNOG00000013545Polr2e10094.286ENSELUG00000005815POLR2E10094.286Esox_lucius
ENSRNOG00000013545Polr2e10099.524ENSFCAG00000007318POLR2E10099.524Felis_catus
ENSRNOG00000013545Polr2e9598.438ENSFALG00000013986POLR2E9998.438Ficedula_albicollis
ENSRNOG00000013545Polr2e10099.048ENSFDAG00000014539POLR2E10099.048Fukomys_damarensis
ENSRNOG00000013545Polr2e10095.714ENSFHEG00000022398polr2eb10095.714Fundulus_heteroclitus
ENSRNOG00000013545Polr2e10094.286ENSGMOG00000007615polr2eb10094.286Gadus_morhua
ENSRNOG00000013545Polr2e10098.571ENSGALG00000002591POLR2E10098.571Gallus_gallus
ENSRNOG00000013545Polr2e10096.190ENSGAFG00000005087polr2eb10096.190Gambusia_affinis
ENSRNOG00000013545Polr2e10094.286ENSGACG00000013247polr2eb10094.286Gasterosteus_aculeatus
ENSRNOG00000013545Polr2e10098.571ENSGAGG00000008356POLR2E10098.571Gopherus_agassizii
ENSRNOG00000013545Polr2e10099.048ENSGGOG00000011267POLR2E10099.048Gorilla_gorilla
ENSRNOG00000013545Polr2e7090.141ENSHBUG00000011099polr2eb10090.141Haplochromis_burtoni
ENSRNOG00000013545Polr2e10098.095ENSHGLG00000013330POLR2E10098.095Heterocephalus_glaber_female
ENSRNOG00000013545Polr2e10098.095ENSHGLG00100011014POLR2E10098.095Heterocephalus_glaber_male
ENSRNOG00000013545Polr2e5591.071ENSHCOG00000012099-8891.071Hippocampus_comes
ENSRNOG00000013545Polr2e10094.286ENSHCOG00000000906polr2eb10094.286Hippocampus_comes
ENSRNOG00000013545Polr2e10095.714ENSIPUG00000019801polr2e10095.714Ictalurus_punctatus
ENSRNOG00000013545Polr2e10099.048ENSSTOG00000002853POLR2E10099.048Ictidomys_tridecemlineatus
ENSRNOG00000013545Polr2e7781.988ENSJJAG00000015812-10081.988Jaculus_jaculus
ENSRNOG00000013545Polr2e10080.476ENSJJAG00000003145-10080.476Jaculus_jaculus
ENSRNOG00000013545Polr2e100100.000ENSJJAG00000016595-100100.000Jaculus_jaculus
ENSRNOG00000013545Polr2e10095.714ENSKMAG00000005954polr2eb10095.714Kryptolebias_marmoratus
ENSRNOG00000013545Polr2e10095.714ENSLBEG00000024802polr2eb10095.714Labrus_bergylta
ENSRNOG00000013545Polr2e10095.714ENSLACG00000013686POLR2E10095.714Latimeria_chalumnae
ENSRNOG00000013545Polr2e7796.296ENSLOCG00000004599POLR2E10096.296Lepisosteus_oculatus
ENSRNOG00000013545Polr2e10079.245ENSLAFG00000025587POLR2E10079.245Loxodonta_africana
ENSRNOG00000013545Polr2e10099.048ENSMFAG00000002884POLR2E10099.048Macaca_fascicularis
ENSRNOG00000013545Polr2e10099.048ENSMMUG00000013927POLR2E10099.048Macaca_mulatta
ENSRNOG00000013545Polr2e10065.877ENSMNEG00000033452-10065.877Macaca_nemestrina
ENSRNOG00000013545Polr2e10099.048ENSMNEG00000034046-10099.048Macaca_nemestrina
ENSRNOG00000013545Polr2e9580.729ENSMLEG00000012405POLR2E9480.729Mandrillus_leucophaeus
ENSRNOG00000013545Polr2e10095.714ENSMAMG00000018703polr2eb10095.714Mastacembelus_armatus
ENSRNOG00000013545Polr2e9095.789ENSMZEG00005010796polr2eb9695.789Maylandia_zebra
ENSRNOG00000013545Polr2e10097.156ENSMGAG00000003769POLR2E10097.156Meleagris_gallopavo
ENSRNOG00000013545Polr2e10068.571ENSMAUG00000011003-10068.571Mesocricetus_auratus
ENSRNOG00000013545Polr2e9897.475ENSMAUG00000010125-100100.000Mesocricetus_auratus
ENSRNOG00000013545Polr2e10099.048ENSMICG00000013063POLR2E10099.048Microcebus_murinus
ENSRNOG00000013545Polr2e100100.000ENSMOCG00000013414Polr2e100100.000Microtus_ochrogaster
ENSRNOG00000013545Polr2e9884.000ENSMMOG00000001167polr2eb9284.000Mola_mola
ENSRNOG00000013545Polr2e10081.429ENSMMOG00000001161polr2eb10081.429Mola_mola
ENSRNOG00000013545Polr2e10098.571ENSMODG00000005494POLR2E10098.571Monodelphis_domestica
ENSRNOG00000013545Polr2e10096.190ENSMALG00000021888polr2eb10096.190Monopterus_albus
ENSRNOG00000013545Polr2e100100.000MGP_CAROLIEiJ_G0015561Polr2e100100.000Mus_caroli
ENSRNOG00000013545Polr2e100100.000ENSMUSG00000004667Polr2e100100.000Mus_musculus
ENSRNOG00000013545Polr2e100100.000MGP_PahariEiJ_G0030974Polr2e100100.000Mus_pahari
ENSRNOG00000013545Polr2e100100.000MGP_SPRETEiJ_G0016379Polr2e100100.000Mus_spretus
ENSRNOG00000013545Polr2e10099.048ENSMPUG00000008953POLR2E10099.048Mustela_putorius_furo
ENSRNOG00000013545Polr2e10099.048ENSMLUG00000013193POLR2E10099.048Myotis_lucifugus
ENSRNOG00000013545Polr2e6693.478ENSMLUG00000006376-10082.099Myotis_lucifugus
ENSRNOG00000013545Polr2e8575.419ENSNGAG00000017344-9675.419Nannospalax_galili
ENSRNOG00000013545Polr2e100100.000ENSNGAG00000001147Polr2e100100.000Nannospalax_galili
ENSRNOG00000013545Polr2e10083.810ENSNBRG00000022772polr2eb10083.810Neolamprologus_brichardi
ENSRNOG00000013545Polr2e10095.261ENSNLEG00000001207-10095.261Nomascus_leucogenys
ENSRNOG00000013545Polr2e10076.190ENSNLEG00000031364-10076.190Nomascus_leucogenys
ENSRNOG00000013545Polr2e10087.619ENSOPRG00000008331POLR2E10087.619Ochotona_princeps
ENSRNOG00000013545Polr2e10072.381ENSODEG00000011490-10072.381Octodon_degus
ENSRNOG00000013545Polr2e10099.048ENSODEG00000013230-10099.048Octodon_degus
ENSRNOG00000013545Polr2e8987.634ENSODEG00000007985-10087.634Octodon_degus
ENSRNOG00000013545Polr2e10095.714ENSONIG00000002519polr2eb10095.714Oreochromis_niloticus
ENSRNOG00000013545Polr2e10096.190ENSORLG00000015346polr2eb10096.190Oryzias_latipes
ENSRNOG00000013545Polr2e10096.190ENSORLG00020020700polr2e10096.190Oryzias_latipes_hni
ENSRNOG00000013545Polr2e10096.190ENSORLG00015016842polr2e10096.190Oryzias_latipes_hsok
ENSRNOG00000013545Polr2e10095.714ENSOMEG00000002709polr2eb10095.714Oryzias_melastigma
ENSRNOG00000013545Polr2e10099.048ENSOGAG00000012311POLR2E10099.048Otolemur_garnettii
ENSRNOG00000013545Polr2e10099.048ENSOARG00000010994POLR2E10099.048Ovis_aries
ENSRNOG00000013545Polr2e9996.020ENSPPAG00000003145POLR2E10098.953Pan_paniscus
ENSRNOG00000013545Polr2e10099.524ENSPPRG00000000777POLR2E10099.524Panthera_pardus
ENSRNOG00000013545Polr2e9577.487ENSPTIG00000012237POLR2E9597.959Panthera_tigris_altaica
ENSRNOG00000013545Polr2e10099.048ENSPTRG00000010183POLR2E10099.048Pan_troglodytes
ENSRNOG00000013545Polr2e10099.048ENSPANG00000018011POLR2E10099.048Papio_anubis
ENSRNOG00000013545Polr2e10094.762ENSPKIG00000009607POLR2E10094.762Paramormyrops_kingsleyae
ENSRNOG00000013545Polr2e10094.762ENSPKIG00000024123POLR2E10094.762Paramormyrops_kingsleyae
ENSRNOG00000013545Polr2e9796.923ENSPSIG00000002870POLR2E9994.634Pelodiscus_sinensis
ENSRNOG00000013545Polr2e10083.333ENSPMGG00000014354polr2eb10083.333Periophthalmus_magnuspinnatus
ENSRNOG00000013545Polr2e100100.000ENSPEMG00000023261Polr2e100100.000Peromyscus_maniculatus_bairdii
ENSRNOG00000013545Polr2e9098.413ENSPCIG00000007312POLR2E7598.413Phascolarctos_cinereus
ENSRNOG00000013545Polr2e10096.190ENSPFOG00000005734polr2eb10096.190Poecilia_formosa
ENSRNOG00000013545Polr2e10096.190ENSPLAG00000014496polr2eb10096.190Poecilia_latipinna
ENSRNOG00000013545Polr2e10096.190ENSPMEG00000008053polr2eb10096.190Poecilia_mexicana
ENSRNOG00000013545Polr2e10096.190ENSPREG00000006489polr2eb10096.190Poecilia_reticulata
ENSRNOG00000013545Polr2e10091.469ENSPPYG00000009305POLR2E10091.469Pongo_abelii
ENSRNOG00000013545Polr2e5598.198ENSPCAG00000016605POLR2E10098.198Procavia_capensis
ENSRNOG00000013545Polr2e10099.048ENSPCOG00000014491POLR2E10099.048Propithecus_coquereli
ENSRNOG00000013545Polr2e65100.000ENSPVAG00000007718-65100.000Pteropus_vampyrus
ENSRNOG00000013545Polr2e9095.789ENSPNYG00000019797polr2eb9695.789Pundamilia_nyererei
ENSRNOG00000013545Polr2e10095.714ENSPNAG00000026263POLR2E10095.714Pygocentrus_nattereri
ENSRNOG00000013545Polr2e10072.986ENSRBIG00000027259-10072.986Rhinopithecus_bieti
ENSRNOG00000013545Polr2e10099.048ENSRBIG00000028726-10099.048Rhinopithecus_bieti
ENSRNOG00000013545Polr2e10099.048ENSRROG00000043763POLR2E10099.048Rhinopithecus_roxellana
ENSRNOG00000013545Polr2e9944.037YBR154CRPB59844.037Saccharomyces_cerevisiae
ENSRNOG00000013545Polr2e10099.048ENSSBOG00000027241POLR2E10099.048Saimiri_boliviensis_boliviensis
ENSRNOG00000013545Polr2e10098.571ENSSHAG00000010690POLR2E10098.571Sarcophilus_harrisii
ENSRNOG00000013545Polr2e10095.714ENSSFOG00015006073polr2e10095.714Scleropages_formosus
ENSRNOG00000013545Polr2e10095.714ENSSMAG00000012782polr2eb10095.714Scophthalmus_maximus
ENSRNOG00000013545Polr2e10095.714ENSSDUG00000003352polr2eb10095.714Seriola_dumerili
ENSRNOG00000013545Polr2e10095.714ENSSLDG00000004965polr2eb10095.714Seriola_lalandi_dorsalis
ENSRNOG00000013545Polr2e10097.143ENSSPUG00000006114POLR2E10097.143Sphenodon_punctatus
ENSRNOG00000013545Polr2e10095.714ENSSPAG00000017556polr2eb10095.714Stegastes_partitus
ENSRNOG00000013545Polr2e10099.048ENSSSCG00000021472POLR2E10099.048Sus_scrofa
ENSRNOG00000013545Polr2e6690.000ENSTGUG00000000922POLR2E9990.000Taeniopygia_guttata
ENSRNOG00000013545Polr2e9595.288ENSTRUG00000018238polr2eb10083.333Takifugu_rubripes
ENSRNOG00000013545Polr2e10095.714ENSTNIG00000013187polr2eb10095.714Tetraodon_nigroviridis
ENSRNOG00000013545Polr2e10098.571ENSTTRG00000001484POLR2E10098.571Tursiops_truncatus
ENSRNOG00000013545Polr2e9295.876ENSUAMG00000009166POLR2E10086.190Ursus_americanus
ENSRNOG00000013545Polr2e10099.048ENSVVUG00000022818POLR2E5499.048Vulpes_vulpes
ENSRNOG00000013545Polr2e10097.619ENSXETG00000003291polr2e10097.619Xenopus_tropicalis
ENSRNOG00000013545Polr2e10083.810ENSXCOG00000009197polr2eb10083.810Xiphophorus_couchianus
ENSRNOG00000013545Polr2e10096.190ENSXMAG00000026495polr2eb10096.190Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001054RNA polymerase I activity21873635.IBAFunction
GO:0001055RNA polymerase II activity21873635.IBAFunction
GO:0001056RNA polymerase III activity21873635.IBAFunction
GO:0003674molecular_function-NDFunction
GO:0003677DNA binding-IEAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity21873635.IBAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity-IEAFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus-IEAComponent
GO:0005634nucleus-ISOComponent
GO:0005634nucleus-ISSComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005665RNA polymerase II, core complex21873635.IBAComponent
GO:0005665RNA polymerase II, core complex-ISOComponent
GO:0005665RNA polymerase II, core complex-ISSComponent
GO:0005666RNA polymerase III complex21873635.IBAComponent
GO:0005736RNA polymerase I complex21873635.IBAComponent
GO:0006351transcription, DNA-templated-IEAProcess
GO:0006360transcription by RNA polymerase I-IEAProcess
GO:0006366transcription by RNA polymerase II-ISOProcess
GO:0006366transcription by RNA polymerase II-ISSProcess
GO:0006383transcription by RNA polymerase III-IEAProcess
GO:0008150biological_process-NDProcess

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