EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000013752 (Gene tree)
Gene ID: 282824
Gene Symbol: Elavl3
Alias: Huc
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 32924 bases
Position: chr8:23030118-23063041
Accession: 628892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000018416	RRM_5	PF13893.6	2.3e-13	1	2
ENSRNOP00000018416	RRM_5	PF13893.6	2.3e-13	2	2
ENSRNOP00000018416	RRM_1	PF00076.22	3e-64	1	3
ENSRNOP00000018416	RRM_1	PF00076.22	3e-64	2	3
ENSRNOP00000018416	RRM_1	PF00076.22	3e-64	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000018416	-	1761	XM_006242616	ENSRNOP00000018416	367 (aa)	XP_006242678	Q76IJ9

Gene Model

Click here to download ENSRNOG00000013752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000013752	Elavl3	90	34.940	ENSRNOG00000014527	Pabpc2	61	34.940
ENSRNOG00000013752	Elavl3	90	37.179	ENSRNOG00000016813	Tia1	69	37.179
ENSRNOG00000013752	Elavl3	71	42.391	ENSRNOG00000010379	Celf1	57	43.590
ENSRNOG00000013752	Elavl3	63	36.207	ENSRNOG00000008482	Rbms1	52	33.871
ENSRNOG00000013752	Elavl3	90	34.940	ENSRNOG00000029749	Pabpc4l	96	34.940
ENSRNOG00000013752	Elavl3	90	37.179	ENSRNOG00000020271	Tial1	73	37.179
ENSRNOG00000013752	Elavl3	92	36.145	ENSRNOG00000008639	Pabpc1	69	36.145
ENSRNOG00000013752	Elavl3	90	66.867	ENSRNOG00000001069	Elavl1	95	66.265
ENSRNOG00000013752	Elavl3	68	41.975	ENSRNOG00000020875	Celf3	53	42.308
ENSRNOG00000013752	Elavl3	99	78.892	ENSRNOG00000023601	Elavl4	98	78.628
ENSRNOG00000013752	Elavl3	100	78.400	ENSRNOG00000006853	Elavl2	98	77.867
ENSRNOG00000013752	Elavl3	73	40.741	ENSRNOG00000023661	Celf2	56	41.026
ENSRNOG00000013752	Elavl3	80	41.975	ENSRNOG00000052224	Celf6	92	34.940
ENSRNOG00000013752	Elavl3	92	37.349	ENSRNOG00000017367	Pabpc6	60	37.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013752	Elavl3	100	99.455	ENSG00000196361	ELAVL3	100	99.455	Homo_sapiens
ENSRNOG00000013752	Elavl3	99	84.890	ENSAPOG00000017565	elavl3	99	83.791	Acanthochromis_polyacanthus
ENSRNOG00000013752	Elavl3	99	95.355	ENSAMEG00000010487	ELAVL3	100	95.355	Ailuropoda_melanoleuca
ENSRNOG00000013752	Elavl3	99	84.890	ENSACIG00000024190	elavl3	99	83.791	Amphilophus_citrinellus
ENSRNOG00000013752	Elavl3	100	87.738	ENSAOCG00000005054	elavl3	100	86.649	Amphiprion_ocellaris
ENSRNOG00000013752	Elavl3	100	87.738	ENSAPEG00000011145	elavl3	100	86.649	Amphiprion_percula
ENSRNOG00000013752	Elavl3	98	85.515	ENSATEG00000020941	elavl3	99	84.401	Anabas_testudineus
ENSRNOG00000013752	Elavl3	98	89.503	ENSACAG00000016958	ELAVL3	93	88.398	Anolis_carolinensis
ENSRNOG00000013752	Elavl3	100	97.275	ENSANAG00000030798	ELAVL3	100	97.275	Aotus_nancymaae
ENSRNOG00000013752	Elavl3	99	84.848	ENSACLG00000018260	elavl3	99	83.747	Astatotilapia_calliptera
ENSRNOG00000013752	Elavl3	100	88.556	ENSAMXG00000040498	elavl3	100	87.466	Astyanax_mexicanus
ENSRNOG00000013752	Elavl3	100	97.003	ENSBTAG00000014412	ELAVL3	100	97.003	Bos_taurus
ENSRNOG00000013752	Elavl3	100	99.455	ENSCJAG00000005589	ELAVL3	100	99.455	Callithrix_jacchus
ENSRNOG00000013752	Elavl3	100	99.183	ENSCAFG00000017350	ELAVL3	100	99.183	Canis_familiaris
ENSRNOG00000013752	Elavl3	100	97.019	ENSCAFG00020004614	ELAVL3	100	97.019	Canis_lupus_dingo
ENSRNOG00000013752	Elavl3	99	98.901	ENSCHIG00000003436	ELAVL3	100	98.901	Capra_hircus
ENSRNOG00000013752	Elavl3	99	98.907	ENSTSYG00000036621	ELAVL3	100	98.907	Carlito_syrichta
ENSRNOG00000013752	Elavl3	89	82.716	ENSCAPG00000017620	ELAVL3	99	82.716	Cavia_aperea
ENSRNOG00000013752	Elavl3	89	82.716	ENSCPOG00000001793	ELAVL3	99	82.716	Cavia_porcellus
ENSRNOG00000013752	Elavl3	100	99.455	ENSCCAG00000034350	ELAVL3	100	99.455	Cebus_capucinus
ENSRNOG00000013752	Elavl3	100	99.455	ENSCATG00000044086	ELAVL3	100	99.455	Cercocebus_atys
ENSRNOG00000013752	Elavl3	100	99.183	ENSCLAG00000016404	ELAVL3	100	99.183	Chinchilla_lanigera
ENSRNOG00000013752	Elavl3	86	99.130	ENSCSAG00000006755	ELAVL3	100	99.130	Chlorocebus_sabaeus
ENSRNOG00000013752	Elavl3	100	86.957	ENSCPBG00000023982	ELAVL3	100	85.870	Chrysemys_picta_bellii
ENSRNOG00000013752	Elavl3	100	99.455	ENSCANG00000038728	ELAVL3	100	99.455	Colobus_angolensis_palliatus
ENSRNOG00000013752	Elavl3	100	100.000	ENSCGRG00001018927	Elavl3	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000013752	Elavl3	100	99.728	ENSCGRG00000007158	Elavl3	100	99.728	Cricetulus_griseus_crigri
ENSRNOG00000013752	Elavl3	100	84.196	ENSCSEG00000021095	elavl3	100	83.106	Cynoglossus_semilaevis
ENSRNOG00000013752	Elavl3	100	87.738	ENSCVAG00000014060	elavl3	100	86.649	Cyprinodon_variegatus
ENSRNOG00000013752	Elavl3	100	88.011	ENSDARG00000014420	elavl3	100	86.921	Danio_rerio
ENSRNOG00000013752	Elavl3	99	98.626	ENSDORG00000002538	Elavl3	100	98.626	Dipodomys_ordii
ENSRNOG00000013752	Elavl3	51	99.237	ENSETEG00000000164	-	57	99.237	Echinops_telfairi
ENSRNOG00000013752	Elavl3	100	99.183	ENSEASG00005004561	ELAVL3	100	99.183	Equus_asinus_asinus
ENSRNOG00000013752	Elavl3	100	98.370	ENSECAG00000020594	ELAVL3	100	98.370	Equus_caballus
ENSRNOG00000013752	Elavl3	100	86.104	ENSELUG00000023043	elavl3	100	85.014	Esox_lucius
ENSRNOG00000013752	Elavl3	100	99.183	ENSFCAG00000024763	ELAVL3	100	99.183	Felis_catus
ENSRNOG00000013752	Elavl3	100	87.738	ENSFDAG00000008449	ELAVL3	100	87.738	Fukomys_damarensis
ENSRNOG00000013752	Elavl3	100	84.469	ENSFHEG00000001675	elavl3	100	83.379	Fundulus_heteroclitus
ENSRNOG00000013752	Elavl3	100	88.011	ENSGMOG00000003760	elavl3	100	86.921	Gadus_morhua
ENSRNOG00000013752	Elavl3	60	74.803	ENSGALG00000047364	-	100	74.803	Gallus_gallus
ENSRNOG00000013752	Elavl3	99	87.879	ENSGAFG00000016015	elavl3	98	86.777	Gambusia_affinis
ENSRNOG00000013752	Elavl3	100	87.738	ENSGACG00000013839	elavl3	100	86.649	Gasterosteus_aculeatus
ENSRNOG00000013752	Elavl3	93	90.123	ENSGAGG00000016141	ELAVL3	99	90.123	Gopherus_agassizii
ENSRNOG00000013752	Elavl3	99	99.451	ENSGGOG00000008635	ELAVL3	100	99.451	Gorilla_gorilla
ENSRNOG00000013752	Elavl3	100	85.559	ENSHBUG00000020978	elavl3	100	84.469	Haplochromis_burtoni
ENSRNOG00000013752	Elavl3	84	69.156	ENSHGLG00000019379	-	97	69.156	Heterocephalus_glaber_female
ENSRNOG00000013752	Elavl3	100	99.455	ENSHGLG00000015199	ELAVL3	100	99.455	Heterocephalus_glaber_female
ENSRNOG00000013752	Elavl3	95	98.281	ENSHGLG00100011200	ELAVL3	100	98.281	Heterocephalus_glaber_male
ENSRNOG00000013752	Elavl3	100	88.556	ENSHCOG00000015894	elavl3	100	87.466	Hippocampus_comes
ENSRNOG00000013752	Elavl3	99	84.848	ENSIPUG00000013002	elavl3	98	83.747	Ictalurus_punctatus
ENSRNOG00000013752	Elavl3	100	99.455	ENSSTOG00000021111	ELAVL3	100	99.455	Ictidomys_tridecemlineatus
ENSRNOG00000013752	Elavl3	99	98.626	ENSJJAG00000023513	Elavl3	100	98.626	Jaculus_jaculus
ENSRNOG00000013752	Elavl3	99	84.890	ENSKMAG00000017412	elavl3	99	83.791	Kryptolebias_marmoratus
ENSRNOG00000013752	Elavl3	99	84.890	ENSLBEG00000008073	elavl3	100	82.124	Labrus_bergylta
ENSRNOG00000013752	Elavl3	100	88.556	ENSLOCG00000007647	elavl3	100	87.466	Lepisosteus_oculatus
ENSRNOG00000013752	Elavl3	99	98.365	ENSLAFG00000005013	ELAVL3	99	98.365	Loxodonta_africana
ENSRNOG00000013752	Elavl3	100	99.455	ENSMFAG00000003692	ELAVL3	100	99.455	Macaca_fascicularis
ENSRNOG00000013752	Elavl3	100	99.455	ENSMMUG00000020616	ELAVL3	100	99.455	Macaca_mulatta
ENSRNOG00000013752	Elavl3	100	99.183	ENSMNEG00000043973	ELAVL3	100	99.183	Macaca_nemestrina
ENSRNOG00000013752	Elavl3	88	92.213	ENSMLEG00000013976	ELAVL3	99	92.213	Mandrillus_leucophaeus
ENSRNOG00000013752	Elavl3	99	84.573	ENSMAMG00000011697	elavl3	99	83.471	Mastacembelus_armatus
ENSRNOG00000013752	Elavl3	100	87.738	ENSMZEG00005019053	elavl3	100	86.649	Maylandia_zebra
ENSRNOG00000013752	Elavl3	99	100.000	ENSMAUG00000016478	Elavl3	100	100.000	Mesocricetus_auratus
ENSRNOG00000013752	Elavl3	100	98.913	ENSMICG00000016528	ELAVL3	100	99.451	Microcebus_murinus
ENSRNOG00000013752	Elavl3	100	100.000	ENSMOCG00000002046	Elavl3	100	100.000	Microtus_ochrogaster
ENSRNOG00000013752	Elavl3	100	84.196	ENSMMOG00000012154	elavl3	99	83.106	Mola_mola
ENSRNOG00000013752	Elavl3	99	89.344	ENSMODG00000006653	ELAVL3	93	89.344	Monodelphis_domestica
ENSRNOG00000013752	Elavl3	99	87.912	ENSMALG00000016659	elavl3	99	86.813	Monopterus_albus
ENSRNOG00000013752	Elavl3	100	100.000	MGP_CAROLIEiJ_G0031894	Elavl3	100	100.000	Mus_caroli
ENSRNOG00000013752	Elavl3	100	100.000	ENSMUSG00000003410	Elavl3	100	100.000	Mus_musculus
ENSRNOG00000013752	Elavl3	100	99.728	MGP_PahariEiJ_G0014760	Elavl3	100	99.728	Mus_pahari
ENSRNOG00000013752	Elavl3	100	98.910	ENSMPUG00000005040	ELAVL3	100	98.910	Mustela_putorius_furo
ENSRNOG00000013752	Elavl3	99	98.093	ENSMLUG00000016320	ELAVL3	99	98.093	Myotis_lucifugus
ENSRNOG00000013752	Elavl3	100	99.455	ENSNGAG00000000968	Elavl3	100	99.455	Nannospalax_galili
ENSRNOG00000013752	Elavl3	100	87.738	ENSNBRG00000010319	elavl3	100	86.649	Neolamprologus_brichardi
ENSRNOG00000013752	Elavl3	99	93.956	ENSMEUG00000016706	ELAVL3	100	93.956	Notamacropus_eugenii
ENSRNOG00000013752	Elavl3	91	97.976	ENSOPRG00000007373	ELAVL3	100	97.976	Ochotona_princeps
ENSRNOG00000013752	Elavl3	100	99.455	ENSODEG00000015790	ELAVL3	100	99.455	Octodon_degus
ENSRNOG00000013752	Elavl3	99	87.912	ENSONIG00000001538	elavl3	99	86.813	Oreochromis_niloticus
ENSRNOG00000013752	Elavl3	88	91.700	ENSOANG00000015046	ELAVL3	98	90.119	Ornithorhynchus_anatinus
ENSRNOG00000013752	Elavl3	100	87.466	ENSORLG00000005379	elavl3	100	86.376	Oryzias_latipes
ENSRNOG00000013752	Elavl3	100	87.738	ENSORLG00020004570	elavl3	100	86.649	Oryzias_latipes_hni
ENSRNOG00000013752	Elavl3	98	88.579	ENSORLG00015000662	elavl3	98	87.465	Oryzias_latipes_hsok
ENSRNOG00000013752	Elavl3	100	84.469	ENSOMEG00000023959	elavl3	100	83.379	Oryzias_melastigma
ENSRNOG00000013752	Elavl3	100	99.455	ENSOGAG00000007072	ELAVL3	100	99.455	Otolemur_garnettii
ENSRNOG00000013752	Elavl3	100	98.910	ENSOARG00000018464	ELAVL3	100	98.910	Ovis_aries
ENSRNOG00000013752	Elavl3	100	99.455	ENSPPAG00000033972	ELAVL3	100	99.455	Pan_paniscus
ENSRNOG00000013752	Elavl3	100	99.183	ENSPPRG00000005151	ELAVL3	100	99.183	Panthera_pardus
ENSRNOG00000013752	Elavl3	97	95.058	ENSPTIG00000013610	ELAVL3	97	95.058	Panthera_tigris_altaica
ENSRNOG00000013752	Elavl3	100	99.455	ENSPTRG00000010506	ELAVL3	100	99.455	Pan_troglodytes
ENSRNOG00000013752	Elavl3	100	99.455	ENSPANG00000005849	ELAVL3	100	99.455	Papio_anubis
ENSRNOG00000013752	Elavl3	100	88.011	ENSPKIG00000016207	elavl3	100	86.921	Paramormyrops_kingsleyae
ENSRNOG00000013752	Elavl3	100	84.741	ENSPMGG00000002016	elavl3	100	83.651	Periophthalmus_magnuspinnatus
ENSRNOG00000013752	Elavl3	98	84.085	ENSPFOG00000007754	elavl3	100	83.024	Poecilia_formosa
ENSRNOG00000013752	Elavl3	98	85.515	ENSPLAG00000001547	elavl3	99	84.401	Poecilia_latipinna
ENSRNOG00000013752	Elavl3	98	85.515	ENSPMEG00000010156	elavl3	99	84.401	Poecilia_mexicana
ENSRNOG00000013752	Elavl3	100	87.738	ENSPREG00000006971	elavl3	100	86.649	Poecilia_reticulata
ENSRNOG00000013752	Elavl3	84	85.714	ENSPPYG00000009583	-	98	85.714	Pongo_abelii
ENSRNOG00000013752	Elavl3	84	100.000	ENSPCAG00000015952	ELAVL3	65	100.000	Procavia_capensis
ENSRNOG00000013752	Elavl3	100	99.455	ENSPCOG00000023781	ELAVL3	100	99.455	Propithecus_coquereli
ENSRNOG00000013752	Elavl3	100	99.183	ENSPVAG00000014893	ELAVL3	100	99.183	Pteropus_vampyrus
ENSRNOG00000013752	Elavl3	99	84.848	ENSPNYG00000013186	elavl3	97	83.747	Pundamilia_nyererei
ENSRNOG00000013752	Elavl3	100	88.556	ENSPNAG00000003633	elavl3	100	87.466	Pygocentrus_nattereri
ENSRNOG00000013752	Elavl3	100	99.455	ENSRBIG00000034762	ELAVL3	100	99.455	Rhinopithecus_bieti
ENSRNOG00000013752	Elavl3	89	94.531	ENSRROG00000034305	ELAVL3	100	94.309	Rhinopithecus_roxellana
ENSRNOG00000013752	Elavl3	99	99.451	ENSSBOG00000030047	ELAVL3	100	99.451	Saimiri_boliviensis_boliviensis
ENSRNOG00000013752	Elavl3	86	94.348	ENSSHAG00000005583	ELAVL3	100	94.348	Sarcophilus_harrisii
ENSRNOG00000013752	Elavl3	95	87.608	ENSSFOG00015023630	elavl3	100	86.455	Scleropages_formosus
ENSRNOG00000013752	Elavl3	99	84.573	ENSSMAG00000004671	elavl3	99	83.471	Scophthalmus_maximus
ENSRNOG00000013752	Elavl3	99	84.890	ENSSDUG00000020708	elavl3	99	83.791	Seriola_dumerili
ENSRNOG00000013752	Elavl3	100	88.283	ENSSLDG00000013769	elavl3	100	87.193	Seriola_lalandi_dorsalis
ENSRNOG00000013752	Elavl3	99	89.041	ENSSARG00000005949	ELAVL3	100	89.041	Sorex_araneus
ENSRNOG00000013752	Elavl3	99	84.890	ENSSPAG00000000990	elavl3	99	83.791	Stegastes_partitus
ENSRNOG00000013752	Elavl3	100	99.183	ENSSSCG00000013617	ELAVL3	100	99.183	Sus_scrofa
ENSRNOG00000013752	Elavl3	98	85.515	ENSTRUG00000010719	elavl3	99	84.401	Takifugu_rubripes
ENSRNOG00000013752	Elavl3	99	87.193	ENSTNIG00000018572	elavl3	99	86.104	Tetraodon_nigroviridis
ENSRNOG00000013752	Elavl3	97	94.190	ENSTBEG00000006133	ELAVL3	100	94.190	Tupaia_belangeri
ENSRNOG00000013752	Elavl3	100	98.910	ENSTTRG00000001789	ELAVL3	100	98.910	Tursiops_truncatus
ENSRNOG00000013752	Elavl3	99	95.604	ENSUAMG00000000405	ELAVL3	98	95.604	Ursus_americanus
ENSRNOG00000013752	Elavl3	98	94.137	ENSUMAG00000019546	ELAVL3	88	94.137	Ursus_maritimus
ENSRNOG00000013752	Elavl3	100	97.275	ENSVVUG00000023733	ELAVL3	100	97.275	Vulpes_vulpes
ENSRNOG00000013752	Elavl3	99	86.649	ENSXETG00000016741	elavl3	99	85.559	Xenopus_tropicalis
ENSRNOG00000013752	Elavl3	100	84.469	ENSXMAG00000018287	elavl3	100	83.379	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0017091	AU-rich element binding	-	IEA	Function
GO:0017091	AU-rich element binding	-	ISO	Function