EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000013844 (Gene tree)
Gene ID: -
Gene Symbol: Fam172a
Alias: LOC294606|RGD1305526
Full Name: family with sequence similarity 172%2C member A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 602370 bases
Position: chr2:4942775-5545144
Accession: 1305526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000076094	Arb2	PF09757.9	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000093535	-	277	-	-	- (aa)	-	-
ENSRNOT00000093155	-	753	-	-	- (aa)	-	-
ENSRNOT00000093548	-	1213	-	ENSRNOP00000076094	271 (aa)	-	A0A1W2Q607
ENSRNOT00000041541	-	1110	-	ENSRNOP00000051391	370 (aa)	-	D3ZYE5
ENSRNOT00000093741	-	1311	-	ENSRNOP00000076112	370 (aa)	-	D3ZYE5

Gene Model

Click here to download ENSRNOG00000013844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013844	Fam172a	100	94.465	ENSG00000113391	FAM172A	89	94.465	Homo_sapiens
ENSRNOG00000013844	Fam172a	99	85.130	ENSAPLG00000004055	FAM172A	65	85.130	Anas_platyrhynchos
ENSRNOG00000013844	Fam172a	69	40.741	ENSAPLG00000011555	-	77	40.741	Anas_platyrhynchos
ENSRNOG00000013844	Fam172a	99	85.502	ENSACAG00000013305	FAM172A	70	85.502	Anolis_carolinensis
ENSRNOG00000013844	Fam172a	99	93.680	ENSANAG00000035869	FAM172A	74	91.351	Aotus_nancymaae
ENSRNOG00000013844	Fam172a	99	93.680	ENSBTAG00000050195	FAM172A	65	93.680	Bos_taurus
ENSRNOG00000013844	Fam172a	99	93.680	ENSCJAG00000010444	FAM172A	65	93.680	Callithrix_jacchus
ENSRNOG00000013844	Fam172a	99	94.052	ENSCAFG00000008064	FAM172A	73	94.052	Canis_familiaris
ENSRNOG00000013844	Fam172a	99	94.052	ENSCAFG00020006210	FAM172A	96	93.284	Canis_lupus_dingo
ENSRNOG00000013844	Fam172a	99	93.680	ENSCHIG00000008440	FAM172A	65	93.680	Capra_hircus
ENSRNOG00000013844	Fam172a	98	94.361	ENSTSYG00000006286	FAM172A	85	94.361	Carlito_syrichta
ENSRNOG00000013844	Fam172a	63	86.726	ENSCAPG00000014103	-	69	86.726	Cavia_aperea
ENSRNOG00000013844	Fam172a	100	94.096	ENSCCAG00000023116	FAM172A	92	94.096	Cebus_capucinus
ENSRNOG00000013844	Fam172a	99	93.309	ENSCLAG00000005472	FAM172A	73	91.892	Chinchilla_lanigera
ENSRNOG00000013844	Fam172a	99	44.853	ENSCPBG00000004402	-	69	44.853	Chrysemys_picta_bellii
ENSRNOG00000013844	Fam172a	100	94.834	ENSCANG00000040412	FAM172A	92	94.834	Colobus_angolensis_palliatus
ENSRNOG00000013844	Fam172a	99	93.680	ENSDNOG00000004689	FAM172A	65	93.680	Dasypus_novemcinctus
ENSRNOG00000013844	Fam172a	100	94.834	ENSDORG00000013558	Fam172a	89	94.834	Dipodomys_ordii
ENSRNOG00000013844	Fam172a	99	91.822	ENSECAG00000018274	FAM172A	72	91.822	Equus_caballus
ENSRNOG00000013844	Fam172a	99	91.450	ENSEEUG00000002887	FAM172A	65	91.450	Erinaceus_europaeus
ENSRNOG00000013844	Fam172a	99	67.286	ENSELUG00000017647	fam172a	63	67.286	Esox_lucius
ENSRNOG00000013844	Fam172a	99	94.052	ENSFCAG00000025443	FAM172A	65	94.052	Felis_catus
ENSRNOG00000013844	Fam172a	99	84.758	ENSFALG00000009072	FAM172A	72	84.758	Ficedula_albicollis
ENSRNOG00000013844	Fam172a	99	44.485	ENSFALG00000006501	-	74	44.485	Ficedula_albicollis
ENSRNOG00000013844	Fam172a	99	85.130	ENSGALG00000014661	FAM172A	65	85.130	Gallus_gallus
ENSRNOG00000013844	Fam172a	99	87.732	ENSGAGG00000003839	FAM172A	65	87.732	Gopherus_agassizii
ENSRNOG00000013844	Fam172a	99	45.221	ENSGAGG00000022828	-	69	45.221	Gopherus_agassizii
ENSRNOG00000013844	Fam172a	100	94.834	ENSGGOG00000010296	FAM172A	92	94.834	Gorilla_gorilla
ENSRNOG00000013844	Fam172a	99	92.565	ENSHGLG00000011178	FAM172A	65	92.565	Heterocephalus_glaber_female
ENSRNOG00000013844	Fam172a	99	92.565	ENSHGLG00100013340	FAM172A	73	92.565	Heterocephalus_glaber_male
ENSRNOG00000013844	Fam172a	99	94.796	ENSSTOG00000009918	FAM172A	65	94.796	Ictidomys_tridecemlineatus
ENSRNOG00000013844	Fam172a	99	48.148	ENSLACG00000001532	si:ch73-41e3.7	70	48.148	Latimeria_chalumnae
ENSRNOG00000013844	Fam172a	99	72.491	ENSLOCG00000001629	fam172a	64	73.606	Lepisosteus_oculatus
ENSRNOG00000013844	Fam172a	100	94.834	ENSMFAG00000001171	FAM172A	92	94.834	Macaca_fascicularis
ENSRNOG00000013844	Fam172a	100	94.834	ENSMNEG00000039938	FAM172A	92	94.834	Macaca_nemestrina
ENSRNOG00000013844	Fam172a	100	95.203	ENSMICG00000030403	FAM172A	88	95.203	Microcebus_murinus
ENSRNOG00000013844	Fam172a	99	95.167	ENSMOCG00000003613	Fam172a	73	95.167	Microtus_ochrogaster
ENSRNOG00000013844	Fam172a	99	87.732	ENSMODG00000020131	FAM172A	65	87.732	Monodelphis_domestica
ENSRNOG00000013844	Fam172a	77	96.216	MGP_PahariEiJ_G0015818	Fam172a	67	96.216	Mus_pahari
ENSRNOG00000013844	Fam172a	99	94.796	ENSNGAG00000019570	Fam172a	73	94.796	Nannospalax_galili
ENSRNOG00000013844	Fam172a	100	94.834	ENSNLEG00000013903	FAM172A	89	94.834	Nomascus_leucogenys
ENSRNOG00000013844	Fam172a	99	88.104	ENSOANG00000011068	FAM172A	72	88.104	Ornithorhynchus_anatinus
ENSRNOG00000013844	Fam172a	99	93.309	ENSOCUG00000007299	FAM172A	64	93.309	Oryctolagus_cuniculus
ENSRNOG00000013844	Fam172a	99	92.937	ENSOGAG00000015189	FAM172A	65	92.937	Otolemur_garnettii
ENSRNOG00000013844	Fam172a	99	93.680	ENSOARG00000016711	FAM172A	61	93.680	Ovis_aries
ENSRNOG00000013844	Fam172a	100	95.203	ENSPPAG00000030542	FAM172A	92	95.203	Pan_paniscus
ENSRNOG00000013844	Fam172a	99	94.052	ENSPPRG00000006653	FAM172A	65	94.052	Panthera_pardus
ENSRNOG00000013844	Fam172a	99	94.052	ENSPTIG00000012681	FAM172A	65	94.052	Panthera_tigris_altaica
ENSRNOG00000013844	Fam172a	100	95.203	ENSPTRG00000017074	FAM172A	92	95.203	Pan_troglodytes
ENSRNOG00000013844	Fam172a	100	94.834	ENSPANG00000011687	FAM172A	92	94.834	Papio_anubis
ENSRNOG00000013844	Fam172a	99	71.852	ENSPKIG00000012314	fam172a	71	71.852	Paramormyrops_kingsleyae
ENSRNOG00000013844	Fam172a	99	94.796	ENSPEMG00000009604	-	65	94.796	Peromyscus_maniculatus_bairdii
ENSRNOG00000013844	Fam172a	99	87.732	ENSPCIG00000028612	FAM172A	65	87.732	Phascolarctos_cinereus
ENSRNOG00000013844	Fam172a	67	92.857	ENSPCOG00000024072	FAM172A	74	92.857	Propithecus_coquereli
ENSRNOG00000013844	Fam172a	65	89.714	ENSRBIG00000028680	-	78	89.714	Rhinopithecus_bieti
ENSRNOG00000013844	Fam172a	100	94.834	ENSRROG00000023807	FAM172A	92	94.834	Rhinopithecus_roxellana
ENSRNOG00000013844	Fam172a	99	93.309	ENSSBOG00000019860	FAM172A	68	93.309	Saimiri_boliviensis_boliviensis
ENSRNOG00000013844	Fam172a	99	86.989	ENSSHAG00000013743	FAM172A	65	86.989	Sarcophilus_harrisii
ENSRNOG00000013844	Fam172a	99	86.989	ENSSPUG00000008161	FAM172A	65	86.989	Sphenodon_punctatus
ENSRNOG00000013844	Fam172a	99	94.052	ENSSSCG00000027608	FAM172A	73	94.052	Sus_scrofa
ENSRNOG00000013844	Fam172a	99	44.891	ENSTGUG00000013623	-	81	44.891	Taeniopygia_guttata
ENSRNOG00000013844	Fam172a	99	84.387	ENSTGUG00000000715	FAM172A	71	84.387	Taeniopygia_guttata
ENSRNOG00000013844	Fam172a	91	49.200	ENSTNIG00000009902	fam172a	75	51.587	Tetraodon_nigroviridis
ENSRNOG00000013844	Fam172a	99	94.052	ENSTTRG00000001521	FAM172A	65	94.052	Tursiops_truncatus
ENSRNOG00000013844	Fam172a	99	94.052	ENSUMAG00000005442	FAM172A	72	94.052	Ursus_maritimus
ENSRNOG00000013844	Fam172a	99	94.052	ENSVVUG00000022112	FAM172A	71	94.052	Vulpes_vulpes
ENSRNOG00000013844	Fam172a	99	78.889	ENSXETG00000011592	fam172a	64	78.889	Xenopus_tropicalis
ENSRNOG00000013844	Fam172a	99	44.118	ENSXETG00000033027	-	70	44.118	Xenopus_tropicalis