EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000013847 (Gene tree)
Gene ID: 292681
Gene Symbol: Nova2
Alias: LOC292681
Full Name: NOVA alternative splicing regulator 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 34274 bases
Position: chr1:79831534-79865807
Accession: 1308032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000054774	KH_1	PF00013.29	4.8e-48	1	3
ENSRNOP00000054774	KH_1	PF00013.29	4.8e-48	2	3
ENSRNOP00000054774	KH_1	PF00013.29	4.8e-48	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000057965	-	1476	XM_008759097	ENSRNOP00000054774	491 (aa)	XP_008757319	F1M4H5

Gene Model

Click here to download ENSRNOG00000013847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000013847	Nova2	55	41.538	ENSRNOG00000012406	Pcbp4	76	41.538
ENSRNOG00000013847	Nova2	54	36.232	ENSRNOG00000013579	LOC100359916	57	36.232
ENSRNOG00000013847	Nova2	50	41.096	ENSRNOG00000036852	Pcbp2	65	41.096
ENSRNOG00000013847	Nova2	54	37.681	ENSRNOG00000019113	Hnrnpk	57	37.681
ENSRNOG00000013847	Nova2	99	71.602	ENSRNOG00000031440	Nova1	61	80.066
ENSRNOG00000013847	Nova2	54	36.765	ENSRNOG00000043370	Fubp1	56	31.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013847	Nova2	99	97.755	ENSG00000104967	NOVA2	100	100.000	Homo_sapiens
ENSRNOG00000013847	Nova2	68	100.000	ENSAMEG00000000649	NOVA2	95	100.000	Ailuropoda_melanoleuca
ENSRNOG00000013847	Nova2	95	80.508	ENSACAG00000003724	NOVA2	98	80.258	Anolis_carolinensis
ENSRNOG00000013847	Nova2	99	83.673	ENSANAG00000022520	NOVA2	59	84.868	Aotus_nancymaae
ENSRNOG00000013847	Nova2	99	97.755	ENSBTAG00000013157	NOVA2	99	97.755	Bos_taurus
ENSRNOG00000013847	Nova2	99	97.755	ENSCJAG00000012121	NOVA2	89	97.755	Callithrix_jacchus
ENSRNOG00000013847	Nova2	95	98.060	ENSCAFG00000004359	NOVA2	97	93.878	Canis_familiaris
ENSRNOG00000013847	Nova2	99	97.755	ENSCAFG00020001763	NOVA2	66	97.755	Canis_lupus_dingo
ENSRNOG00000013847	Nova2	99	97.755	ENSCHIG00000010547	NOVA2	89	97.755	Capra_hircus
ENSRNOG00000013847	Nova2	69	99.029	ENSCPOG00000020582	NOVA2	90	99.029	Cavia_porcellus
ENSRNOG00000013847	Nova2	99	97.755	ENSCCAG00000037311	NOVA2	87	97.755	Cebus_capucinus
ENSRNOG00000013847	Nova2	99	97.755	ENSCATG00000045122	NOVA2	99	97.755	Cercocebus_atys
ENSRNOG00000013847	Nova2	60	98.438	ENSCLAG00000000991	-	86	98.438	Chinchilla_lanigera
ENSRNOG00000013847	Nova2	99	94.286	ENSCSAG00000003105	NOVA2	96	94.286	Chlorocebus_sabaeus
ENSRNOG00000013847	Nova2	99	81.874	ENSCPBG00000007153	NOVA2	90	80.744	Chrysemys_picta_bellii
ENSRNOG00000013847	Nova2	97	43.725	ENSCSAVG00000009137	-	88	61.176	Ciona_savignyi
ENSRNOG00000013847	Nova2	99	98.982	ENSCGRG00001013374	Nova2	90	98.982	Cricetulus_griseus_chok1gshd
ENSRNOG00000013847	Nova2	95	98.060	ENSDNOG00000031258	NOVA2	99	94.251	Dasypus_novemcinctus
ENSRNOG00000013847	Nova2	69	100.000	ENSDORG00000026568	Nova2	97	100.000	Dipodomys_ordii
ENSRNOG00000013847	Nova2	95	63.597	ENSEBUG00000012405	NOVA2	78	68.571	Eptatretus_burgeri
ENSRNOG00000013847	Nova2	68	55.556	ENSEBUG00000004758	-	84	55.556	Eptatretus_burgeri
ENSRNOG00000013847	Nova2	99	94.661	ENSEASG00005014236	NOVA2	99	94.661	Equus_asinus_asinus
ENSRNOG00000013847	Nova2	62	82.237	ENSECAG00000024041	NOVA2	87	87.551	Equus_caballus
ENSRNOG00000013847	Nova2	99	97.347	ENSFCAG00000024784	NOVA2	99	97.347	Felis_catus
ENSRNOG00000013847	Nova2	95	81.915	ENSGAGG00000009498	NOVA2	97	81.466	Gopherus_agassizii
ENSRNOG00000013847	Nova2	95	93.777	ENSGGOG00000000325	NOVA2	100	93.777	Gorilla_gorilla
ENSRNOG00000013847	Nova2	99	89.592	ENSHGLG00000016103	NOVA2	93	89.592	Heterocephalus_glaber_female
ENSRNOG00000013847	Nova2	59	100.000	ENSHGLG00100015153	NOVA2	100	100.000	Heterocephalus_glaber_male
ENSRNOG00000013847	Nova2	97	95.798	ENSSTOG00000022126	NOVA2	100	95.798	Ictidomys_tridecemlineatus
ENSRNOG00000013847	Nova2	67	97.980	ENSJJAG00000000944	Nova2	100	99.524	Jaculus_jaculus
ENSRNOG00000013847	Nova2	95	92.918	ENSLAFG00000025917	NOVA2	100	95.064	Loxodonta_africana
ENSRNOG00000013847	Nova2	77	100.000	ENSMFAG00000043672	NOVA2	72	100.000	Macaca_fascicularis
ENSRNOG00000013847	Nova2	99	83.265	ENSMMUG00000004085	NOVA2	67	98.684	Macaca_mulatta
ENSRNOG00000013847	Nova2	99	95.306	ENSMNEG00000040253	NOVA2	86	94.898	Macaca_nemestrina
ENSRNOG00000013847	Nova2	66	100.000	ENSMLEG00000030389	NOVA2	100	100.000	Mandrillus_leucophaeus
ENSRNOG00000013847	Nova2	99	90.408	ENSMAUG00000014038	Nova2	98	90.408	Mesocricetus_auratus
ENSRNOG00000013847	Nova2	99	97.959	ENSMICG00000028720	NOVA2	99	97.959	Microcebus_murinus
ENSRNOG00000013847	Nova2	99	99.184	ENSMOCG00000018489	Nova2	92	99.184	Microtus_ochrogaster
ENSRNOG00000013847	Nova2	58	89.236	ENSMODG00000021529	NOVA2	84	89.841	Monodelphis_domestica
ENSRNOG00000013847	Nova2	95	99.568	MGP_CAROLIEiJ_G0029262	-	100	99.568	Mus_caroli
ENSRNOG00000013847	Nova2	95	99.568	MGP_CAROLIEiJ_G0029261	-	100	99.568	Mus_caroli
ENSRNOG00000013847	Nova2	99	99.184	ENSMUSG00000030411	Nova2	99	99.184	Mus_musculus
ENSRNOG00000013847	Nova2	99	99.184	MGP_PahariEiJ_G0021122	-	99	99.184	Mus_pahari
ENSRNOG00000013847	Nova2	99	99.184	MGP_PahariEiJ_G0021121	-	94	99.184	Mus_pahari
ENSRNOG00000013847	Nova2	99	99.184	MGP_SPRETEiJ_G0030346	-	99	99.184	Mus_spretus
ENSRNOG00000013847	Nova2	99	99.184	MGP_SPRETEiJ_G0030345	-	88	99.184	Mus_spretus
ENSRNOG00000013847	Nova2	64	97.753	ENSMPUG00000005444	NOVA2	99	97.753	Mustela_putorius_furo
ENSRNOG00000013847	Nova2	77	100.000	ENSNGAG00000014104	Nova2	95	100.000	Nannospalax_galili
ENSRNOG00000013847	Nova2	77	87.255	ENSNLEG00000002399	-	100	87.255	Nomascus_leucogenys
ENSRNOG00000013847	Nova2	61	79.208	ENSMEUG00000000562	NOVA2	99	78.850	Notamacropus_eugenii
ENSRNOG00000013847	Nova2	61	98.077	ENSOPRG00000010051	NOVA2	68	100.000	Ochotona_princeps
ENSRNOG00000013847	Nova2	99	89.388	ENSODEG00000008485	NOVA2	96	89.388	Octodon_degus
ENSRNOG00000013847	Nova2	99	84.694	ENSOCUG00000022891	NOVA2	99	98.477	Oryctolagus_cuniculus
ENSRNOG00000013847	Nova2	99	97.551	ENSOGAG00000028973	NOVA2	95	97.551	Otolemur_garnettii
ENSRNOG00000013847	Nova2	59	99.531	ENSOARG00000010434	-	72	99.526	Ovis_aries
ENSRNOG00000013847	Nova2	96	96.875	ENSPPAG00000035049	-	100	100.000	Pan_paniscus
ENSRNOG00000013847	Nova2	96	98.081	ENSPPRG00000005941	NOVA2	96	98.081	Panthera_pardus
ENSRNOG00000013847	Nova2	61	99.515	ENSPTIG00000015368	NOVA2	64	99.515	Panthera_tigris_altaica
ENSRNOG00000013847	Nova2	99	97.755	ENSPTRG00000011173	NOVA2	99	97.755	Pan_troglodytes
ENSRNOG00000013847	Nova2	95	98.056	ENSPANG00000023868	NOVA2	96	98.056	Papio_anubis
ENSRNOG00000013847	Nova2	56	94.406	ENSPSIG00000006125	-	85	94.406	Pelodiscus_sinensis
ENSRNOG00000013847	Nova2	61	95.380	ENSPCIG00000007632	NOVA2	96	86.929	Phascolarctos_cinereus
ENSRNOG00000013847	Nova2	84	91.283	ENSPPYG00000010139	-	99	91.283	Pongo_abelii
ENSRNOG00000013847	Nova2	99	95.277	ENSPCOG00000022693	NOVA2	98	97.645	Propithecus_coquereli
ENSRNOG00000013847	Nova2	98	92.931	ENSPVAG00000006169	NOVA2	100	92.931	Pteropus_vampyrus
ENSRNOG00000013847	Nova2	73	99.138	ENSRROG00000037399	NOVA2	79	99.138	Rhinopithecus_roxellana
ENSRNOG00000013847	Nova2	60	86.755	ENSSBOG00000001000	-	84	86.755	Saimiri_boliviensis_boliviensis
ENSRNOG00000013847	Nova2	79	92.135	ENSSPUG00000002591	NOVA2	94	88.542	Sphenodon_punctatus
ENSRNOG00000013847	Nova2	99	97.947	ENSSSCG00000035029	NOVA2	99	97.947	Sus_scrofa
ENSRNOG00000013847	Nova2	99	80.263	ENSTRUG00000019498	NOVA2	94	87.500	Takifugu_rubripes
ENSRNOG00000013847	Nova2	97	94.931	ENSTTRG00000001612	NOVA2	99	94.931	Tursiops_truncatus
ENSRNOG00000013847	Nova2	62	98.684	ENSUAMG00000015647	NOVA2	68	98.684	Ursus_americanus
ENSRNOG00000013847	Nova2	60	97.561	ENSVVUG00000002971	-	57	97.561	Vulpes_vulpes
ENSRNOG00000013847	Nova2	99	58.333	ENSXETG00000019101	nova2	88	81.443	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0051252	regulation of RNA metabolic process	-	IEA	Process
GO:0051252	regulation of RNA metabolic process	-	ISO	Process
GO:0120163	negative regulation of cold-induced thermogenesis	-	ISO	Process
GO:0120163	negative regulation of cold-induced thermogenesis	27635635.	ISS	Process