EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000013987 (Gene tree)
Gene ID: 314619
Gene Symbol: Sbno2
Alias: LOC314619|RGD1307194|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 46831 bases
Position: chr7:12471824-12518654
Accession: 1307194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000062533	ResIII	PF04851.15	7.6e-07	1	1
ENSRNOP00000071247	ResIII	PF04851.15	8.3e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000077146	-	7518	XM_006240908	ENSRNOP00000071247	1351 (aa)	XP_006240970	A0A0G2JZZ8
ENSRNOT00000068197	-	4826	XM_006240909	ENSRNOP00000062533	1284 (aa)	XP_006240971	D3ZDU8

Gene Model

Click here to download ENSRNOG00000013987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000013987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000013987	Sbno2	78	60.421	ENSRNOG00000001064	Sbno1	82	57.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000013987	Sbno2	98	84.355	ENSG00000064932	SBNO2	97	84.591	Homo_sapiens
ENSRNOG00000013987	Sbno2	89	69.939	ENSAPOG00000003185	si:ch73-63e15.2	88	68.261	Acanthochromis_polyacanthus
ENSRNOG00000013987	Sbno2	89	69.679	ENSAOCG00000016581	si:ch73-63e15.2	96	68.416	Amphiprion_ocellaris
ENSRNOG00000013987	Sbno2	89	69.592	ENSAPEG00000008862	si:ch73-63e15.2	75	69.686	Amphiprion_percula
ENSRNOG00000013987	Sbno2	89	69.278	ENSATEG00000023838	si:ch73-63e15.2	93	71.144	Anabas_testudineus
ENSRNOG00000013987	Sbno2	98	71.198	ENSAPLG00000007158	SBNO2	100	70.737	Anas_platyrhynchos
ENSRNOG00000013987	Sbno2	98	82.677	ENSANAG00000026685	SBNO2	99	81.336	Aotus_nancymaae
ENSRNOG00000013987	Sbno2	89	68.636	ENSACLG00000005090	si:ch73-63e15.2	75	66.722	Astatotilapia_calliptera
ENSRNOG00000013987	Sbno2	94	66.313	ENSAMXG00000015881	si:ch73-63e15.2	84	68.349	Astyanax_mexicanus
ENSRNOG00000013987	Sbno2	88	68.407	ENSAMXG00000018868	sbno2a	98	68.893	Astyanax_mexicanus
ENSRNOG00000013987	Sbno2	99	84.429	ENSBTAG00000020780	SBNO2	98	85.066	Bos_taurus
ENSRNOG00000013987	Sbno2	99	83.281	ENSCAFG00000019543	SBNO2	100	82.374	Canis_familiaris
ENSRNOG00000013987	Sbno2	92	86.160	ENSCAFG00020017115	SBNO2	98	84.343	Canis_lupus_dingo
ENSRNOG00000013987	Sbno2	98	85.185	ENSCHIG00000026127	SBNO2	100	82.451	Capra_hircus
ENSRNOG00000013987	Sbno2	87	87.456	ENSCAPG00000005731	SBNO2	99	85.133	Cavia_aperea
ENSRNOG00000013987	Sbno2	98	83.717	ENSCPOG00000007477	SBNO2	99	82.021	Cavia_porcellus
ENSRNOG00000013987	Sbno2	100	80.176	ENSCCAG00000037518	SBNO2	99	80.784	Cebus_capucinus
ENSRNOG00000013987	Sbno2	98	83.962	ENSCATG00000037046	SBNO2	99	82.669	Cercocebus_atys
ENSRNOG00000013987	Sbno2	89	88.158	ENSCLAG00000010178	SBNO2	98	88.742	Chinchilla_lanigera
ENSRNOG00000013987	Sbno2	98	84.827	ENSCSAG00000012317	SBNO2	99	82.125	Chlorocebus_sabaeus
ENSRNOG00000013987	Sbno2	99	69.775	ENSCPBG00000008920	SBNO2	82	86.607	Chrysemys_picta_bellii
ENSRNOG00000013987	Sbno2	87	83.474	ENSCANG00000036745	SBNO2	98	84.397	Colobus_angolensis_palliatus
ENSRNOG00000013987	Sbno2	100	92.973	ENSCGRG00001023960	Sbno2	100	92.899	Cricetulus_griseus_chok1gshd
ENSRNOG00000013987	Sbno2	100	94.822	ENSCGRG00000011984	Sbno2	100	94.749	Cricetulus_griseus_crigri
ENSRNOG00000013987	Sbno2	89	66.696	ENSCSEG00000006856	si:ch73-63e15.2	90	69.297	Cynoglossus_semilaevis
ENSRNOG00000013987	Sbno2	89	68.712	ENSCVAG00000005663	si:ch73-63e15.2	76	68.225	Cyprinodon_variegatus
ENSRNOG00000013987	Sbno2	92	63.629	ENSDARG00000098801	sbno2a	89	63.429	Danio_rerio
ENSRNOG00000013987	Sbno2	89	68.122	ENSDARG00000016188	SBNO2	81	67.367	Danio_rerio
ENSRNOG00000013987	Sbno2	100	86.019	ENSDORG00000002916	Sbno2	100	85.578	Dipodomys_ordii
ENSRNOG00000013987	Sbno2	98	83.846	ENSEASG00005021621	SBNO2	98	84.252	Equus_asinus_asinus
ENSRNOG00000013987	Sbno2	98	83.846	ENSECAG00000011827	SBNO2	98	84.252	Equus_caballus
ENSRNOG00000013987	Sbno2	89	69.573	ENSELUG00000020457	si:ch73-63e15.2	80	66.639	Esox_lucius
ENSRNOG00000013987	Sbno2	91	75.292	ENSFALG00000013988	SBNO2	95	71.286	Ficedula_albicollis
ENSRNOG00000013987	Sbno2	98	81.761	ENSFDAG00000015186	SBNO2	100	79.749	Fukomys_damarensis
ENSRNOG00000013987	Sbno2	89	68.609	ENSFHEG00000022262	si:ch73-63e15.2	75	68.059	Fundulus_heteroclitus
ENSRNOG00000013987	Sbno2	93	67.140	ENSGMOG00000007542	si:ch73-63e15.2	97	68.139	Gadus_morhua
ENSRNOG00000013987	Sbno2	98	68.955	ENSGALG00000037522	SBNO2	88	73.223	Gallus_gallus
ENSRNOG00000013987	Sbno2	89	68.668	ENSGAFG00000004860	si:ch73-63e15.2	90	68.000	Gambusia_affinis
ENSRNOG00000013987	Sbno2	89	68.680	ENSGACG00000013190	si:ch73-63e15.2	95	69.025	Gasterosteus_aculeatus
ENSRNOG00000013987	Sbno2	98	69.656	ENSGAGG00000008348	SBNO2	86	75.799	Gopherus_agassizii
ENSRNOG00000013987	Sbno2	89	68.783	ENSHBUG00000010742	si:ch73-63e15.2	76	68.858	Haplochromis_burtoni
ENSRNOG00000013987	Sbno2	100	84.717	ENSHGLG00000008739	SBNO2	100	84.802	Heterocephalus_glaber_female
ENSRNOG00000013987	Sbno2	88	89.270	ENSHGLG00100005269	SBNO2	98	89.270	Heterocephalus_glaber_male
ENSRNOG00000013987	Sbno2	89	68.115	ENSHCOG00000000884	si:ch73-63e15.2	85	68.576	Hippocampus_comes
ENSRNOG00000013987	Sbno2	89	69.379	ENSIPUG00000000537	si:ch73-63e15.2	84	68.480	Ictalurus_punctatus
ENSRNOG00000013987	Sbno2	88	67.680	ENSIPUG00000019672	sbno2	93	70.582	Ictalurus_punctatus
ENSRNOG00000013987	Sbno2	98	87.776	ENSSTOG00000025832	SBNO2	100	86.354	Ictidomys_tridecemlineatus
ENSRNOG00000013987	Sbno2	99	85.000	ENSJJAG00000017397	Sbno2	99	84.525	Jaculus_jaculus
ENSRNOG00000013987	Sbno2	89	69.191	ENSKMAG00000005541	si:ch73-63e15.2	76	69.251	Kryptolebias_marmoratus
ENSRNOG00000013987	Sbno2	89	68.329	ENSLBEG00000025016	si:ch73-63e15.2	96	69.588	Labrus_bergylta
ENSRNOG00000013987	Sbno2	50	63.636	ENSLBEG00000005937	-	99	64.545	Labrus_bergylta
ENSRNOG00000013987	Sbno2	51	69.985	ENSLACG00000012598	SBNO2	99	73.285	Latimeria_chalumnae
ENSRNOG00000013987	Sbno2	97	65.623	ENSLOCG00000004643	si:ch73-63e15.2	84	69.418	Lepisosteus_oculatus
ENSRNOG00000013987	Sbno2	97	79.890	ENSLAFG00000008824	SBNO2	100	79.180	Loxodonta_africana
ENSRNOG00000013987	Sbno2	98	81.861	ENSMFAG00000040030	SBNO2	99	80.385	Macaca_fascicularis
ENSRNOG00000013987	Sbno2	98	83.962	ENSMMUG00000010886	SBNO2	99	82.051	Macaca_mulatta
ENSRNOG00000013987	Sbno2	98	83.871	ENSMNEG00000039927	SBNO2	99	82.579	Macaca_nemestrina
ENSRNOG00000013987	Sbno2	82	86.502	ENSMLEG00000038556	SBNO2	98	84.017	Mandrillus_leucophaeus
ENSRNOG00000013987	Sbno2	89	69.325	ENSMAMG00000018758	si:ch73-63e15.2	74	69.164	Mastacembelus_armatus
ENSRNOG00000013987	Sbno2	89	68.696	ENSMZEG00005010682	si:ch73-63e15.2	75	66.694	Maylandia_zebra
ENSRNOG00000013987	Sbno2	99	72.339	ENSMGAG00000003801	SBNO2	98	71.763	Meleagris_gallopavo
ENSRNOG00000013987	Sbno2	100	93.856	ENSMAUG00000008034	Sbno2	100	93.782	Mesocricetus_auratus
ENSRNOG00000013987	Sbno2	98	85.804	ENSMICG00000013071	SBNO2	100	83.101	Microcebus_murinus
ENSRNOG00000013987	Sbno2	100	95.118	ENSMOCG00000010504	Sbno2	100	95.044	Microtus_ochrogaster
ENSRNOG00000013987	Sbno2	98	73.877	ENSMODG00000005382	SBNO2	92	74.169	Monodelphis_domestica
ENSRNOG00000013987	Sbno2	74	64.927	ENSMALG00000021831	si:ch73-63e15.2	97	64.204	Monopterus_albus
ENSRNOG00000013987	Sbno2	100	97.041	ENSMUSG00000035673	Sbno2	100	97.480	Mus_musculus
ENSRNOG00000013987	Sbno2	100	96.965	MGP_PahariEiJ_G0030976	Sbno2	100	96.965	Mus_pahari
ENSRNOG00000013987	Sbno2	100	97.113	MGP_SPRETEiJ_G0016381	Sbno2	100	97.113	Mus_spretus
ENSRNOG00000013987	Sbno2	77	87.525	ENSMPUG00000008747	SBNO2	100	84.288	Mustela_putorius_furo
ENSRNOG00000013987	Sbno2	100	86.834	ENSNGAG00000004308	Sbno2	100	87.130	Nannospalax_galili
ENSRNOG00000013987	Sbno2	86	67.145	ENSNBRG00000022968	si:ch73-63e15.2	93	72.418	Neolamprologus_brichardi
ENSRNOG00000013987	Sbno2	94	82.759	ENSNLEG00000001305	SBNO2	99	82.577	Nomascus_leucogenys
ENSRNOG00000013987	Sbno2	74	73.729	ENSMEUG00000013511	-	78	73.729	Notamacropus_eugenii
ENSRNOG00000013987	Sbno2	95	83.535	ENSOPRG00000017238	SBNO2	100	84.163	Ochotona_princeps
ENSRNOG00000013987	Sbno2	98	84.390	ENSODEG00000011822	SBNO2	99	83.910	Octodon_degus
ENSRNOG00000013987	Sbno2	89	68.870	ENSONIG00000002490	si:ch73-63e15.2	91	68.485	Oreochromis_niloticus
ENSRNOG00000013987	Sbno2	88	67.913	ENSORLG00000000913	si:ch73-63e15.2	77	67.128	Oryzias_latipes
ENSRNOG00000013987	Sbno2	88	67.913	ENSORLG00020010978	si:ch73-63e15.2	77	67.128	Oryzias_latipes_hni
ENSRNOG00000013987	Sbno2	88	67.944	ENSORLG00015000202	si:ch73-63e15.2	77	67.244	Oryzias_latipes_hsok
ENSRNOG00000013987	Sbno2	89	67.440	ENSOMEG00000000359	si:ch73-63e15.2	73	67.270	Oryzias_melastigma
ENSRNOG00000013987	Sbno2	100	77.591	ENSOARG00000011130	SBNO2	100	77.956	Ovis_aries
ENSRNOG00000013987	Sbno2	98	82.473	ENSPPAG00000032482	SBNO2	97	82.707	Pan_paniscus
ENSRNOG00000013987	Sbno2	98	84.264	ENSPTRG00000010185	SBNO2	99	83.691	Pan_troglodytes
ENSRNOG00000013987	Sbno2	100	78.519	ENSPANG00000009658	SBNO2	99	79.294	Papio_anubis
ENSRNOG00000013987	Sbno2	89	67.742	ENSPKIG00000024201	si:ch73-63e15.2	82	67.657	Paramormyrops_kingsleyae
ENSRNOG00000013987	Sbno2	82	70.209	ENSPKIG00000009707	-	86	70.180	Paramormyrops_kingsleyae
ENSRNOG00000013987	Sbno2	76	78.579	ENSPSIG00000002852	SBNO2	100	78.173	Pelodiscus_sinensis
ENSRNOG00000013987	Sbno2	88	67.629	ENSPMGG00000014375	si:ch73-63e15.2	87	67.895	Periophthalmus_magnuspinnatus
ENSRNOG00000013987	Sbno2	100	90.835	ENSPEMG00000024122	Sbno2	100	90.983	Peromyscus_maniculatus_bairdii
ENSRNOG00000013987	Sbno2	100	71.630	ENSPCIG00000011264	SBNO2	100	71.095	Phascolarctos_cinereus
ENSRNOG00000013987	Sbno2	89	68.930	ENSPFOG00000004096	si:ch73-63e15.2	99	67.972	Poecilia_formosa
ENSRNOG00000013987	Sbno2	89	68.930	ENSPLAG00000014653	si:ch73-63e15.2	76	68.174	Poecilia_latipinna
ENSRNOG00000013987	Sbno2	89	68.914	ENSPMEG00000002129	si:ch73-63e15.2	90	69.675	Poecilia_mexicana
ENSRNOG00000013987	Sbno2	89	69.017	ENSPREG00000006755	si:ch73-63e15.2	75	66.198	Poecilia_reticulata
ENSRNOG00000013987	Sbno2	94	81.551	ENSPCAG00000012256	SBNO2	99	76.137	Procavia_capensis
ENSRNOG00000013987	Sbno2	100	77.289	ENSPCOG00000015216	SBNO2	100	78.095	Propithecus_coquereli
ENSRNOG00000013987	Sbno2	90	67.863	ENSPNYG00000019926	si:ch73-63e15.2	76	68.772	Pundamilia_nyererei
ENSRNOG00000013987	Sbno2	91	65.157	ENSPNAG00000026609	sbno2a	82	70.388	Pygocentrus_nattereri
ENSRNOG00000013987	Sbno2	90	68.268	ENSPNAG00000020260	si:ch73-63e15.2	83	68.448	Pygocentrus_nattereri
ENSRNOG00000013987	Sbno2	92	76.175	ENSRBIG00000009740	SBNO2	95	76.692	Rhinopithecus_bieti
ENSRNOG00000013987	Sbno2	87	88.272	ENSRROG00000044671	SBNO2	96	87.654	Rhinopithecus_roxellana
ENSRNOG00000013987	Sbno2	100	80.264	ENSSBOG00000023562	SBNO2	99	80.952	Saimiri_boliviensis_boliviensis
ENSRNOG00000013987	Sbno2	87	79.274	ENSSHAG00000010241	SBNO2	97	78.742	Sarcophilus_harrisii
ENSRNOG00000013987	Sbno2	89	65.803	ENSSFOG00015005861	si:ch73-63e15.2	92	66.406	Scleropages_formosus
ENSRNOG00000013987	Sbno2	89	68.799	ENSSMAG00000012489	si:ch73-63e15.2	73	68.902	Scophthalmus_maximus
ENSRNOG00000013987	Sbno2	89	69.686	ENSSDUG00000003527	si:ch73-63e15.2	73	69.713	Seriola_dumerili
ENSRNOG00000013987	Sbno2	89	69.774	ENSSLDG00000004623	si:ch73-63e15.2	73	69.800	Seriola_lalandi_dorsalis
ENSRNOG00000013987	Sbno2	90	69.231	ENSSPAG00000017717	si:ch73-63e15.2	76	69.119	Stegastes_partitus
ENSRNOG00000013987	Sbno2	97	85.794	ENSSSCG00000030042	SBNO2	97	85.588	Sus_scrofa
ENSRNOG00000013987	Sbno2	87	68.149	ENSTRUG00000018193	si:ch73-63e15.2	86	67.943	Takifugu_rubripes
ENSRNOG00000013987	Sbno2	87	88.665	ENSUAMG00000006568	SBNO2	91	92.908	Ursus_americanus
ENSRNOG00000013987	Sbno2	81	87.896	ENSVVUG00000022823	SBNO2	100	80.086	Vulpes_vulpes
ENSRNOG00000013987	Sbno2	81	78.854	ENSXETG00000021579	sbno2	92	78.063	Xenopus_tropicalis
ENSRNOG00000013987	Sbno2	74	70.347	ENSXCOG00000009209	si:ch73-63e15.2	91	69.108	Xiphophorus_couchianus
ENSRNOG00000013987	Sbno2	89	68.739	ENSXMAG00000012091	si:ch73-63e15.2	81	70.865	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002281	macrophage activation involved in immune response	21873635.	IBA	Process
GO:0002281	macrophage activation involved in immune response	-	ISO	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0030282	bone mineralization	-	IEA	Process
GO:0030282	bone mineralization	-	ISO	Process
GO:0030316	osteoclast differentiation	21873635.	IBA	Process
GO:0030316	osteoclast differentiation	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0050727	regulation of inflammatory response	21873635.	IBA	Process
GO:0050727	regulation of inflammatory response	-	ISO	Process
GO:0061430	bone trabecula morphogenesis	-	IEA	Process
GO:0061430	bone trabecula morphogenesis	-	ISO	Process
GO:0071222	cellular response to lipopolysaccharide	-	IEA	Process
GO:0071222	cellular response to lipopolysaccharide	-	ISO	Process
GO:0071348	cellular response to interleukin-11	-	IEA	Process
GO:0071348	cellular response to interleukin-11	-	ISO	Process
GO:0071354	cellular response to interleukin-6	21873635.	IBA	Process
GO:0071354	cellular response to interleukin-6	-	ISO	Process
GO:0072674	multinuclear osteoclast differentiation	-	ISO	Process
GO:0072675	osteoclast fusion	-	IEA	Process
GO:0072675	osteoclast fusion	-	ISO	Process
GO:1990830	cellular response to leukemia inhibitory factor	-	IEA	Process
GO:1990830	cellular response to leukemia inhibitory factor	-	ISO	Process