EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000014048 (Gene tree)
Gene ID
312937
Gene Symbol
Cyld
Alias
LOC100362727|LOC312937|LRRGT00003|Rp1|Rp1h
Full Name
CYLD lysine 63 deubiquitinase
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
50194 bases
Position
chr19:19265164-19315357
Accession
1308346
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000070060Ribosomal_S3AePF01015.184e-7811
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000018888-2853XM_008772408ENSRNOP00000018888950 (aa)-F1LPJ6
ENSRNOT00000091626-1365-ENSRNOP00000070060454 (aa)-Q6TXJ6
Gene Model
Click here to download ENSRNOG00000014048's gene model file
Pathways
Pathway IDPathway NameSource
rno04064NF-kappa B signaling pathwayKEGG
rno04217NecroptosisKEGG
rno04380Osteoclast differentiationKEGG
rno04622RIG-I-like receptor signaling pathwayKEGG
rno04625C-type lectin receptor signaling pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014048's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000014048Cyld5283.607ENSRNOG00000011893Rps3a9283.607
ENSRNOG00000014048Cyld5283.197ENSRNOG00000048109LOC1003658399283.197
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0003735structural constituent of ribosome-IEAFunction
GO:0004843thiol-dependent ubiquitin-specific protease activity21873635.IBAFunction
GO:0004843thiol-dependent ubiquitin-specific protease activity-IEAFunction
GO:0004843thiol-dependent ubiquitin-specific protease activity-ISOFunction
GO:0004843thiol-dependent ubiquitin-specific protease activity-ISSFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus-IEAComponent
GO:0005813centrosome-IEAComponent
GO:0005813centrosome-ISOComponent
GO:0005813centrosome-ISSComponent
GO:0005819spindle-IEAComponent
GO:0005819spindle-ISOComponent
GO:0005819spindle-ISSComponent
GO:0005829cytosol21873635.IBAComponent
GO:0005829cytosol-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0005829cytosol-ISSComponent
GO:0005881cytoplasmic microtubule-IEAComponent
GO:0005881cytoplasmic microtubule-ISOComponent
GO:0005881cytoplasmic microtubule-ISSComponent
GO:0005886plasma membrane-IEAComponent
GO:0006412translation-IEAProcess
GO:0006511ubiquitin-dependent protein catabolic process-IEAProcess
GO:0007346regulation of mitotic cell cycle21873635.IBAProcess
GO:0007346regulation of mitotic cell cycle-IEAProcess
GO:0007346regulation of mitotic cell cycle-ISOProcess
GO:0008150biological_process-NDProcess
GO:0008270zinc ion binding-IEAFunction
GO:0008270zinc ion binding-ISOFunction
GO:0008270zinc ion binding-ISSFunction
GO:0010803regulation of tumor necrosis factor-mediated signaling pathway-IEAProcess
GO:0010803regulation of tumor necrosis factor-mediated signaling pathway-ISOProcess
GO:0010803regulation of tumor necrosis factor-mediated signaling pathway-ISSProcess
GO:0016055Wnt signaling pathway-IEAProcess
GO:0016579protein deubiquitination-ISOProcess
GO:0016579protein deubiquitination-ISSProcess
GO:0019901protein kinase binding-IEAFunction
GO:0019901protein kinase binding-ISOFunction
GO:0022627cytosolic small ribosomal subunit-IEAComponent
GO:0030154cell differentiation-IEAProcess
GO:0030496midbody-IEAComponent
GO:0030496midbody-ISOComponent
GO:0030496midbody-ISSComponent
GO:0031234extrinsic component of cytoplasmic side of plasma membrane-IEAComponent
GO:0031234extrinsic component of cytoplasmic side of plasma membrane-ISOComponent
GO:0032088negative regulation of NF-kappaB transcription factor activity21873635.IBAProcess
GO:0032088negative regulation of NF-kappaB transcription factor activity-IEAProcess
GO:0032088negative regulation of NF-kappaB transcription factor activity-ISOProcess
GO:0032088negative regulation of NF-kappaB transcription factor activity-ISSProcess
GO:0036064ciliary basal body-IEAComponent
GO:0036064ciliary basal body-ISOComponent
GO:0036064ciliary basal body-ISSComponent
GO:0043369CD4-positive or CD8-positive, alpha-beta T cell lineage commitment-IEAProcess
GO:0043369CD4-positive or CD8-positive, alpha-beta T cell lineage commitment-ISOProcess
GO:0043393regulation of protein binding-IEAProcess
GO:0043393regulation of protein binding-ISOProcess
GO:0045087innate immune response-IEAProcess
GO:0045087innate immune response-ISOProcess
GO:0045087innate immune response-ISSProcess
GO:0045577regulation of B cell differentiation-IEAProcess
GO:0045577regulation of B cell differentiation-ISOProcess
GO:0045581negative regulation of T cell differentiation-ISOProcess
GO:0045582positive regulation of T cell differentiation-IEAProcess
GO:0045582positive regulation of T cell differentiation-ISOProcess
GO:0046329negative regulation of JNK cascade-IEAProcess
GO:0046329negative regulation of JNK cascade-ISOProcess
GO:0046329negative regulation of JNK cascade-ISSProcess
GO:0048471perinuclear region of cytoplasm-IEAComponent
GO:0048872homeostasis of number of cells-IEAProcess
GO:0048872homeostasis of number of cells-ISOProcess
GO:0050727regulation of inflammatory response-IEAProcess
GO:0050727regulation of inflammatory response-ISOProcess
GO:0050727regulation of inflammatory response-ISSProcess
GO:0050862positive regulation of T cell receptor signaling pathway-IEAProcess
GO:0050862positive regulation of T cell receptor signaling pathway-ISOProcess
GO:0060544regulation of necroptotic process-IEAProcess
GO:0060544regulation of necroptotic process-ISOProcess
GO:0061578Lys63-specific deubiquitinase activity21873635.IBAFunction
GO:0061578Lys63-specific deubiquitinase activity-IEAFunction
GO:0061578Lys63-specific deubiquitinase activity-ISOFunction
GO:0061578Lys63-specific deubiquitinase activity-ISSFunction
GO:0070064proline-rich region binding-IEAFunction
GO:0070064proline-rich region binding-ISOFunction
GO:0070266necroptotic process21873635.IBAProcess
GO:0070266necroptotic process-ISOProcess
GO:0070507regulation of microtubule cytoskeleton organization-IEAProcess
GO:0070507regulation of microtubule cytoskeleton organization-ISOProcess
GO:0070536protein K63-linked deubiquitination21873635.IBAProcess
GO:0070536protein K63-linked deubiquitination-IEAProcess
GO:0070536protein K63-linked deubiquitination-ISOProcess
GO:0070536protein K63-linked deubiquitination-ISSProcess
GO:0071108protein K48-linked deubiquitination-IEAProcess
GO:0090090negative regulation of canonical Wnt signaling pathway-IEAProcess
GO:0090090negative regulation of canonical Wnt signaling pathway-ISOProcess
GO:0090090negative regulation of canonical Wnt signaling pathway-ISSProcess
GO:0097542ciliary tip-IEAComponent
GO:0097542ciliary tip-ISOComponent
GO:0097542ciliary tip-ISSComponent
GO:1901026ripoptosome assembly involved in necroptotic process-IEAProcess
GO:1901026ripoptosome assembly involved in necroptotic process-ISOProcess
GO:1901223negative regulation of NIK/NF-kappaB signaling-IEAProcess
GO:1901223negative regulation of NIK/NF-kappaB signaling-ISOProcess
GO:1901223negative regulation of NIK/NF-kappaB signaling-ISSProcess
GO:1902017regulation of cilium assembly-IEAProcess
GO:1902017regulation of cilium assembly-ISOProcess
GO:1902017regulation of cilium assembly-ISSProcess
GO:1903753negative regulation of p38MAPK cascade-IEAProcess
GO:1903753negative regulation of p38MAPK cascade-ISOProcess
GO:1903753negative regulation of p38MAPK cascade-ISSProcess
GO:1903829positive regulation of cellular protein localization-IEAProcess
GO:1903829positive regulation of cellular protein localization-ISOProcess
GO:1990108protein linear deubiquitination-IEAProcess
GO:1990108protein linear deubiquitination-ISOProcess
GO:1990108protein linear deubiquitination-ISSProcess
GO:1990380Lys48-specific deubiquitinase activity-IEAFunction
GO:1990380Lys48-specific deubiquitinase activity-ISOFunction
GO:2001238positive regulation of extrinsic apoptotic signaling pathway21873635.IBAProcess
GO:2001238positive regulation of extrinsic apoptotic signaling pathway-IEAProcess
GO:2001238positive regulation of extrinsic apoptotic signaling pathway-ISOProcess
GO:2001242regulation of intrinsic apoptotic signaling pathway21873635.IBAProcess
GO:2001242regulation of intrinsic apoptotic signaling pathway-IEAProcess
GO:2001242regulation of intrinsic apoptotic signaling pathway-ISOProcess

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