EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014161 (Gene tree)
Gene ID: 315988
Gene Symbol: Rbm15b
Alias: LOC315988|RGD1305937
Full Name: RNA binding motif protein 15B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 2840 bases
Position: chr8:115618555-115621394
Accession: 1305937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000018994	RRM_1	PF00076.22	7.3e-30	1	2
ENSRNOP00000018994	RRM_1	PF00076.22	7.3e-30	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000018995	-	2664	XM_236613	ENSRNOP00000018994	887 (aa)	XP_017451618	D3ZHD6

Gene Model

Click here to download ENSRNOG00000014161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000014161	Rbm15b	85	46.609	ENSRNOG00000047499	Rbm15	82	45.874

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014161	Rbm15b	100	92.480	ENSG00000259956	RBM15B	100	93.154	Homo_sapiens
ENSRNOG00000014161	Rbm15b	89	88.691	ENSAMEG00000009353	RBM15B	99	88.691	Ailuropoda_melanoleuca
ENSRNOG00000014161	Rbm15b	86	53.316	ENSAPEG00000023123	rbm15b	88	52.881	Amphiprion_percula
ENSRNOG00000014161	Rbm15b	84	51.327	ENSATEG00000008514	rbm15b	87	52.699	Anabas_testudineus
ENSRNOG00000014161	Rbm15b	86	76.825	ENSACAG00000007689	RBM15B	91	75.742	Anolis_carolinensis
ENSRNOG00000014161	Rbm15b	95	88.746	ENSANAG00000026817	RBM15B	100	100.000	Aotus_nancymaae
ENSRNOG00000014161	Rbm15b	86	53.232	ENSACLG00000013346	rbm15b	88	52.658	Astatotilapia_calliptera
ENSRNOG00000014161	Rbm15b	63	54.355	ENSAMXG00000025805	rbm15b	90	55.806	Astyanax_mexicanus
ENSRNOG00000014161	Rbm15b	100	91.285	ENSBTAG00000006500	RBM15B	100	92.067	Bos_taurus
ENSRNOG00000014161	Rbm15b	100	90.556	ENSCAFG00000010266	RBM15B	100	91.667	Canis_familiaris
ENSRNOG00000014161	Rbm15b	100	91.406	ENSCHIG00000016926	-	100	92.031	Capra_hircus
ENSRNOG00000014161	Rbm15b	100	91.256	ENSCPOG00000031950	RBM15B	100	91.816	Cavia_porcellus
ENSRNOG00000014161	Rbm15b	100	92.144	ENSCSAG00000018788	RBM15B	100	92.817	Chlorocebus_sabaeus
ENSRNOG00000014161	Rbm15b	67	94.491	ENSCHOG00000009175	RBM15B	99	94.472	Choloepus_hoffmanni
ENSRNOG00000014161	Rbm15b	100	97.643	ENSCGRG00001015903	Rbm15b	100	97.643	Cricetulus_griseus_chok1gshd
ENSRNOG00000014161	Rbm15b	86	51.469	ENSCSEG00000014504	rbm15b	86	51.613	Cynoglossus_semilaevis
ENSRNOG00000014161	Rbm15b	86	53.468	ENSCVAG00000018913	rbm15b	88	52.994	Cyprinodon_variegatus
ENSRNOG00000014161	Rbm15b	87	59.694	ENSDARG00000078966	rbm15b	99	61.928	Danio_rerio
ENSRNOG00000014161	Rbm15b	67	91.290	ENSDNOG00000036695	RBM15B	96	91.290	Dasypus_novemcinctus
ENSRNOG00000014161	Rbm15b	53	90.909	ENSETEG00000008333	RBM15B	53	90.909	Echinops_telfairi
ENSRNOG00000014161	Rbm15b	100	90.757	ENSEASG00005012861	RBM15B	100	91.203	Equus_asinus_asinus
ENSRNOG00000014161	Rbm15b	100	91.295	ENSECAG00000011809	RBM15B	100	91.741	Equus_caballus
ENSRNOG00000014161	Rbm15b	85	57.452	ENSELUG00000000768	rbm15b	86	56.101	Esox_lucius
ENSRNOG00000014161	Rbm15b	77	80.321	ENSFALG00000014346	RBM15B	100	80.321	Ficedula_albicollis
ENSRNOG00000014161	Rbm15b	93	74.709	ENSGALG00000050969	RBM15B	81	79.581	Gallus_gallus
ENSRNOG00000014161	Rbm15b	86	94.605	ENSGGOG00000001037	RBM15B	95	93.765	Gorilla_gorilla
ENSRNOG00000014161	Rbm15b	86	53.046	ENSHBUG00000009487	rbm15b	88	52.658	Haplochromis_burtoni
ENSRNOG00000014161	Rbm15b	100	91.470	ENSHGLG00000020882	-	100	92.480	Heterocephalus_glaber_female
ENSRNOG00000014161	Rbm15b	85	49.217	ENSHCOG00000014262	rbm15b	90	49.803	Hippocampus_comes
ENSRNOG00000014161	Rbm15b	84	59.254	ENSIPUG00000008345	rbm15b	87	58.431	Ictalurus_punctatus
ENSRNOG00000014161	Rbm15b	87	97.161	ENSSTOG00000008657	RBM15B	100	97.161	Ictidomys_tridecemlineatus
ENSRNOG00000014161	Rbm15b	88	91.519	ENSJJAG00000024067	Rbm15b	94	93.659	Jaculus_jaculus
ENSRNOG00000014161	Rbm15b	100	62.541	ENSLACG00000016607	RBM15B	86	68.725	Latimeria_chalumnae
ENSRNOG00000014161	Rbm15b	100	60.884	ENSLOCG00000013409	rbm15b	87	66.449	Lepisosteus_oculatus
ENSRNOG00000014161	Rbm15b	64	95.390	ENSLAFG00000012673	RBM15B	100	95.390	Loxodonta_africana
ENSRNOG00000014161	Rbm15b	100	93.034	ENSMFAG00000029773	RBM15B	100	93.258	Macaca_fascicularis
ENSRNOG00000014161	Rbm15b	84	53.048	ENSMAMG00000010212	rbm15b	88	52.332	Mastacembelus_armatus
ENSRNOG00000014161	Rbm15b	64	83.922	ENSMGAG00000002238	RBM15B	100	83.922	Meleagris_gallopavo
ENSRNOG00000014161	Rbm15b	100	97.750	ENSMOCG00000001646	Rbm15b	100	97.750	Microtus_ochrogaster
ENSRNOG00000014161	Rbm15b	64	85.487	ENSMODG00000011903	RBM15B	100	85.487	Monodelphis_domestica
ENSRNOG00000014161	Rbm15b	85	52.821	ENSMALG00000020264	rbm15b	95	52.598	Monopterus_albus
ENSRNOG00000014161	Rbm15b	100	98.309	MGP_CAROLIEiJ_G0032637	Rbm15b	100	98.309	Mus_caroli
ENSRNOG00000014161	Rbm15b	100	98.760	ENSMUSG00000074102	Rbm15b	100	98.760	Mus_musculus
ENSRNOG00000014161	Rbm15b	100	98.198	MGP_PahariEiJ_G0015504	Rbm15b	100	98.198	Mus_pahari
ENSRNOG00000014161	Rbm15b	100	98.760	MGP_SPRETEiJ_G0033782	Rbm15b	100	98.760	Mus_spretus
ENSRNOG00000014161	Rbm15b	72	95.768	ENSMPUG00000019339	RBM15B	100	95.768	Mustela_putorius_furo
ENSRNOG00000014161	Rbm15b	100	90.000	ENSNGAG00000022552	Rbm15b	100	89.562	Nannospalax_galili
ENSRNOG00000014161	Rbm15b	84	94.110	ENSNLEG00000018541	RBM15B	93	94.385	Nomascus_leucogenys
ENSRNOG00000014161	Rbm15b	64	85.639	ENSMEUG00000006207	RBM15B	100	85.639	Notamacropus_eugenii
ENSRNOG00000014161	Rbm15b	100	91.011	ENSODEG00000020563	-	100	92.135	Octodon_degus
ENSRNOG00000014161	Rbm15b	64	53.120	ENSONIG00000021253	rbm15b	99	54.908	Oreochromis_niloticus
ENSRNOG00000014161	Rbm15b	56	65.469	ENSOANG00000001071	-	100	67.465	Ornithorhynchus_anatinus
ENSRNOG00000014161	Rbm15b	64	92.553	ENSOCUG00000010322	RBM15B	100	92.553	Oryctolagus_cuniculus
ENSRNOG00000014161	Rbm15b	87	53.450	ENSORLG00000025754	rbm15b	88	52.436	Oryzias_latipes
ENSRNOG00000014161	Rbm15b	87	53.827	ENSORLG00020022257	rbm15b	88	52.881	Oryzias_latipes_hni
ENSRNOG00000014161	Rbm15b	64	96.631	ENSOGAG00000001996	RBM15B	100	96.631	Otolemur_garnettii
ENSRNOG00000014161	Rbm15b	67	95.455	ENSOARG00000007757	RBM15B	96	95.470	Ovis_aries
ENSRNOG00000014161	Rbm15b	67	65.282	ENSPKIG00000010201	rbm15b	100	65.449	Paramormyrops_kingsleyae
ENSRNOG00000014161	Rbm15b	64	83.540	ENSPSIG00000000576	RBM15B	100	83.540	Pelodiscus_sinensis
ENSRNOG00000014161	Rbm15b	79	96.111	ENSPVAG00000003221	RBM15B	86	96.111	Pteropus_vampyrus
ENSRNOG00000014161	Rbm15b	86	53.165	ENSPNYG00000019263	rbm15b	88	52.525	Pundamilia_nyererei
ENSRNOG00000014161	Rbm15b	89	94.717	ENSRROG00000017232	RBM15B	89	93.955	Rhinopithecus_roxellana
ENSRNOG00000014161	Rbm15b	64	85.512	ENSSHAG00000010976	RBM15B	100	85.512	Sarcophilus_harrisii
ENSRNOG00000014161	Rbm15b	100	91.611	ENSSSCG00000011420	RBM15B	100	92.953	Sus_scrofa
ENSRNOG00000014161	Rbm15b	64	84.452	ENSTGUG00000004850	RBM15B	100	84.452	Taeniopygia_guttata
ENSRNOG00000014161	Rbm15b	100	83.482	ENSTBEG00000008724	RBM15B	100	83.835	Tupaia_belangeri
ENSRNOG00000014161	Rbm15b	100	88.802	ENSTTRG00000001431	RBM15B	70	95.016	Tursiops_truncatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0001510	RNA methylation	-	IEA	Process
GO:0001510	RNA methylation	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005635	nuclear envelope	-	IEA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006406	mRNA export from nucleus	-	IEA	Process
GO:0006406	mRNA export from nucleus	-	ISO	Process
GO:0006913	nucleocytoplasmic transport	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0009048	dosage compensation by inactivation of X chromosome	-	IEA	Process
GO:0009048	dosage compensation by inactivation of X chromosome	-	ISO	Process
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0036396	RNA N6-methyladenosine methyltransferase complex	-	IEA	Component
GO:0036396	RNA N6-methyladenosine methyltransferase complex	-	ISO	Component
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process