EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014235 (Gene tree)
Gene ID: 296478
Gene Symbol: Zgpat
Alias: LOC296478|MGC105627|RGD1310801
Full Name: zinc finger CCCH-type and G-patch domain containing
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 16394 bases
Position: chr3:176865156-176881549
Accession: 1310801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000019084	G-patch	PF01585.23	5e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000019084	-	1974	XM_006235749	ENSRNOP00000019084	507 (aa)	XP_006235811	Q5PPF5

Gene Model

Click here to download ENSRNOG00000014235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014235	Zgpat	100	78.752	ENSG00000197114	ZGPAT	100	78.752	Homo_sapiens
ENSRNOG00000014235	Zgpat	100	49.715	ENSAPOG00000001732	zgpat	100	49.905	Acanthochromis_polyacanthus
ENSRNOG00000014235	Zgpat	100	76.699	ENSAMEG00000001752	-	100	76.505	Ailuropoda_melanoleuca
ENSRNOG00000014235	Zgpat	100	48.976	ENSACIG00000015939	zgpat	100	47.445	Amphilophus_citrinellus
ENSRNOG00000014235	Zgpat	100	50.000	ENSAOCG00000014437	zgpat	100	49.444	Amphiprion_ocellaris
ENSRNOG00000014235	Zgpat	100	49.812	ENSAPEG00000006555	zgpat	100	49.630	Amphiprion_percula
ENSRNOG00000014235	Zgpat	100	49.348	ENSATEG00000003346	zgpat	100	48.987	Anabas_testudineus
ENSRNOG00000014235	Zgpat	100	62.852	ENSAPLG00000014707	-	100	62.218	Anas_platyrhynchos
ENSRNOG00000014235	Zgpat	91	59.838	ENSACAG00000012278	-	100	60.243	Anolis_carolinensis
ENSRNOG00000014235	Zgpat	100	78.865	ENSANAG00000035708	ZGPAT	100	79.452	Aotus_nancymaae
ENSRNOG00000014235	Zgpat	100	49.907	ENSACLG00000013778	zgpat	100	49.724	Astatotilapia_calliptera
ENSRNOG00000014235	Zgpat	100	48.684	ENSAMXG00000018583	zgpat	100	48.321	Astyanax_mexicanus
ENSRNOG00000014235	Zgpat	100	76.023	ENSBTAG00000007498	ZGPAT	100	76.413	Bos_taurus
ENSRNOG00000014235	Zgpat	100	79.532	ENSCJAG00000010398	ZGPAT	100	78.168	Callithrix_jacchus
ENSRNOG00000014235	Zgpat	99	72.093	ENSCAFG00000013056	ZGPAT	99	72.093	Canis_familiaris
ENSRNOG00000014235	Zgpat	100	71.676	ENSCAFG00020001956	-	100	72.062	Canis_lupus_dingo
ENSRNOG00000014235	Zgpat	100	76.023	ENSCHIG00000026209	-	100	76.413	Capra_hircus
ENSRNOG00000014235	Zgpat	96	76.258	ENSTSYG00000000795	ZGPAT	97	76.056	Carlito_syrichta
ENSRNOG00000014235	Zgpat	63	70.440	ENSCAPG00000009466	-	100	70.440	Cavia_aperea
ENSRNOG00000014235	Zgpat	100	80.426	ENSCPOG00000014427	ZGPAT	100	80.426	Cavia_porcellus
ENSRNOG00000014235	Zgpat	100	77.886	ENSCCAG00000035441	ZGPAT	100	78.669	Cebus_capucinus
ENSRNOG00000014235	Zgpat	100	78.125	ENSCATG00000034076	ZGPAT	100	78.906	Cercocebus_atys
ENSRNOG00000014235	Zgpat	100	83.658	ENSCLAG00000004087	ZGPAT	100	83.463	Chinchilla_lanigera
ENSRNOG00000014235	Zgpat	100	75.752	ENSCSAG00000016628	ZGPAT	100	76.504	Chlorocebus_sabaeus
ENSRNOG00000014235	Zgpat	64	61.765	ENSCHOG00000013646	-	84	60.294	Choloepus_hoffmanni
ENSRNOG00000014235	Zgpat	100	61.985	ENSCPBG00000014736	-	99	61.842	Chrysemys_picta_bellii
ENSRNOG00000014235	Zgpat	100	79.297	ENSCANG00000041082	ZGPAT	100	79.297	Colobus_angolensis_palliatus
ENSRNOG00000014235	Zgpat	100	91.389	ENSCGRG00001011442	Zgpat	100	91.389	Cricetulus_griseus_chok1gshd
ENSRNOG00000014235	Zgpat	100	82.583	ENSCGRG00000014321	Zgpat	100	82.583	Cricetulus_griseus_crigri
ENSRNOG00000014235	Zgpat	100	48.052	ENSCSEG00000002301	zgpat	100	47.222	Cynoglossus_semilaevis
ENSRNOG00000014235	Zgpat	100	48.881	ENSCVAG00000007255	zgpat	100	49.625	Cyprinodon_variegatus
ENSRNOG00000014235	Zgpat	100	48.381	ENSDARG00000027403	zgpat	100	48.571	Danio_rerio
ENSRNOG00000014235	Zgpat	100	74.369	ENSDNOG00000025874	-	100	74.563	Dasypus_novemcinctus
ENSRNOG00000014235	Zgpat	95	80.164	ENSDORG00000001360	Zgpat	100	80.738	Dipodomys_ordii
ENSRNOG00000014235	Zgpat	93	39.429	ENSEBUG00000009006	ZGPAT	99	39.655	Eptatretus_burgeri
ENSRNOG00000014235	Zgpat	100	67.179	ENSEASG00005023159	-	100	67.238	Equus_asinus_asinus
ENSRNOG00000014235	Zgpat	100	69.608	ENSECAG00000019674	-	100	69.650	Equus_caballus
ENSRNOG00000014235	Zgpat	100	48.519	ENSELUG00000003733	zgpat	100	48.250	Esox_lucius
ENSRNOG00000014235	Zgpat	100	76.023	ENSFCAG00000001173	-	100	76.803	Felis_catus
ENSRNOG00000014235	Zgpat	100	62.731	ENSFALG00000005924	-	100	62.362	Ficedula_albicollis
ENSRNOG00000014235	Zgpat	100	81.287	ENSFDAG00000002974	ZGPAT	100	81.287	Fukomys_damarensis
ENSRNOG00000014235	Zgpat	100	50.185	ENSFHEG00000009966	zgpat	100	49.077	Fundulus_heteroclitus
ENSRNOG00000014235	Zgpat	100	61.510	ENSGALG00000006092	-	100	60.886	Gallus_gallus
ENSRNOG00000014235	Zgpat	100	49.346	ENSGAFG00000020149	zgpat	100	48.972	Gambusia_affinis
ENSRNOG00000014235	Zgpat	100	48.399	ENSGACG00000004662	zgpat	100	48.598	Gasterosteus_aculeatus
ENSRNOG00000014235	Zgpat	100	60.401	ENSGAGG00000019510	-	99	60.517	Gopherus_agassizii
ENSRNOG00000014235	Zgpat	100	75.422	ENSGGOG00000004801	ZGPAT	100	75.422	Gorilla_gorilla
ENSRNOG00000014235	Zgpat	100	50.000	ENSHBUG00000010362	zgpat	100	49.540	Haplochromis_burtoni
ENSRNOG00000014235	Zgpat	100	80.880	ENSHGLG00000014870	ZGPAT	100	80.688	Heterocephalus_glaber_female
ENSRNOG00000014235	Zgpat	100	83.008	ENSHGLG00100003927	ZGPAT	100	82.812	Heterocephalus_glaber_male
ENSRNOG00000014235	Zgpat	100	50.867	ENSHCOG00000004674	zgpat	100	50.189	Hippocampus_comes
ENSRNOG00000014235	Zgpat	100	49.905	ENSIPUG00000012890	zgpat	100	50.382	Ictalurus_punctatus
ENSRNOG00000014235	Zgpat	95	77.847	ENSSTOG00000011986	ZGPAT	100	78.054	Ictidomys_tridecemlineatus
ENSRNOG00000014235	Zgpat	100	84.180	ENSJJAG00000018714	-	100	83.789	Jaculus_jaculus
ENSRNOG00000014235	Zgpat	100	76.172	ENSJJAG00000008007	-	100	75.681	Jaculus_jaculus
ENSRNOG00000014235	Zgpat	100	48.244	ENSKMAG00000006523	zgpat	100	48.423	Kryptolebias_marmoratus
ENSRNOG00000014235	Zgpat	100	48.859	ENSLBEG00000016259	zgpat	100	49.434	Labrus_bergylta
ENSRNOG00000014235	Zgpat	100	56.434	ENSLACG00000002661	zgpat	100	55.861	Latimeria_chalumnae
ENSRNOG00000014235	Zgpat	100	54.943	ENSLOCG00000001659	zgpat	100	54.943	Lepisosteus_oculatus
ENSRNOG00000014235	Zgpat	100	78.516	ENSMFAG00000001467	ZGPAT	100	79.297	Macaca_fascicularis
ENSRNOG00000014235	Zgpat	100	78.516	ENSMMUG00000000171	ZGPAT	100	79.297	Macaca_mulatta
ENSRNOG00000014235	Zgpat	100	78.320	ENSMNEG00000019568	ZGPAT	100	79.102	Macaca_nemestrina
ENSRNOG00000014235	Zgpat	100	78.516	ENSMLEG00000035416	ZGPAT	100	79.297	Mandrillus_leucophaeus
ENSRNOG00000014235	Zgpat	100	48.598	ENSMAMG00000008266	zgpat	100	47.426	Mastacembelus_armatus
ENSRNOG00000014235	Zgpat	100	49.245	ENSMZEG00005021620	zgpat	100	49.071	Maylandia_zebra
ENSRNOG00000014235	Zgpat	100	60.541	ENSMGAG00000006823	-	100	59.747	Meleagris_gallopavo
ENSRNOG00000014235	Zgpat	100	90.607	ENSMAUG00000017248	Zgpat	100	90.607	Mesocricetus_auratus
ENSRNOG00000014235	Zgpat	100	80.156	ENSMICG00000033269	ZGPAT	100	79.961	Microcebus_murinus
ENSRNOG00000014235	Zgpat	100	90.411	ENSMOCG00000001324	Zgpat	100	90.411	Microtus_ochrogaster
ENSRNOG00000014235	Zgpat	100	50.094	ENSMMOG00000014951	zgpat	100	49.540	Mola_mola
ENSRNOG00000014235	Zgpat	92	63.730	ENSMODG00000017016	-	88	64.108	Monodelphis_domestica
ENSRNOG00000014235	Zgpat	100	47.692	ENSMALG00000006584	zgpat	100	47.818	Monopterus_albus
ENSRNOG00000014235	Zgpat	100	92.996	MGP_CAROLIEiJ_G0024806	Zgpat	100	92.996	Mus_caroli
ENSRNOG00000014235	Zgpat	100	94.912	ENSMUSG00000027582	Zgpat	100	94.912	Mus_musculus
ENSRNOG00000014235	Zgpat	100	92.788	MGP_PahariEiJ_G0026254	Zgpat	100	93.372	Mus_pahari
ENSRNOG00000014235	Zgpat	100	94.129	MGP_SPRETEiJ_G0025732	Zgpat	100	93.542	Mus_spretus
ENSRNOG00000014235	Zgpat	100	72.626	ENSMLUG00000005264	-	100	72.626	Myotis_lucifugus
ENSRNOG00000014235	Zgpat	100	48.399	ENSNBRG00000021521	zgpat	100	48.327	Neolamprologus_brichardi
ENSRNOG00000014235	Zgpat	100	75.568	ENSNLEG00000010146	ZGPAT	100	76.326	Nomascus_leucogenys
ENSRNOG00000014235	Zgpat	86	56.319	ENSMEUG00000011946	-	100	56.502	Notamacropus_eugenii
ENSRNOG00000014235	Zgpat	63	73.375	ENSOPRG00000002115	-	100	74.613	Ochotona_princeps
ENSRNOG00000014235	Zgpat	100	80.664	ENSODEG00000006562	ZGPAT	100	80.664	Octodon_degus
ENSRNOG00000014235	Zgpat	100	50.000	ENSONIG00000009365	zgpat	100	49.538	Oreochromis_niloticus
ENSRNOG00000014235	Zgpat	100	67.300	ENSOANG00000004932	-	100	67.048	Ornithorhynchus_anatinus
ENSRNOG00000014235	Zgpat	63	74.260	ENSOCUG00000008687	-	100	74.260	Oryctolagus_cuniculus
ENSRNOG00000014235	Zgpat	100	51.326	ENSORLG00000000880	zgpat	100	51.141	Oryzias_latipes
ENSRNOG00000014235	Zgpat	100	50.758	ENSORLG00020004339	zgpat	100	51.521	Oryzias_latipes_hni
ENSRNOG00000014235	Zgpat	100	50.568	ENSORLG00015018532	zgpat	100	51.521	Oryzias_latipes_hsok
ENSRNOG00000014235	Zgpat	100	51.607	ENSOMEG00000014655	zgpat	100	51.985	Oryzias_melastigma
ENSRNOG00000014235	Zgpat	100	76.448	ENSOGAG00000034509	ZGPAT	100	77.027	Otolemur_garnettii
ENSRNOG00000014235	Zgpat	100	69.853	ENSOARG00000010128	ZGPAT	100	70.221	Ovis_aries
ENSRNOG00000014235	Zgpat	100	77.237	ENSPPAG00000027831	ZGPAT	100	77.237	Pan_paniscus
ENSRNOG00000014235	Zgpat	100	77.193	ENSPPRG00000024151	-	100	76.998	Panthera_pardus
ENSRNOG00000014235	Zgpat	100	77.193	ENSPTIG00000020325	-	100	76.998	Panthera_tigris_altaica
ENSRNOG00000014235	Zgpat	100	77.432	ENSPTRG00000013750	ZGPAT	100	77.432	Pan_troglodytes
ENSRNOG00000014235	Zgpat	100	75.803	ENSPANG00000005904	ZGPAT	100	76.560	Papio_anubis
ENSRNOG00000014235	Zgpat	100	50.370	ENSPKIG00000012056	zgpat	100	50.741	Paramormyrops_kingsleyae
ENSRNOG00000014235	Zgpat	100	61.738	ENSPSIG00000015801	-	100	61.922	Pelodiscus_sinensis
ENSRNOG00000014235	Zgpat	100	48.381	ENSPMGG00000014856	zgpat	100	47.566	Periophthalmus_magnuspinnatus
ENSRNOG00000014235	Zgpat	100	90.020	ENSPEMG00000015676	Zgpat	100	90.020	Peromyscus_maniculatus_bairdii
ENSRNOG00000014235	Zgpat	100	64.962	ENSPCIG00000017922	-	100	65.134	Phascolarctos_cinereus
ENSRNOG00000014235	Zgpat	100	50.469	ENSPFOG00000010326	zgpat	100	50.657	Poecilia_formosa
ENSRNOG00000014235	Zgpat	100	50.844	ENSPLAG00000002135	zgpat	100	50.469	Poecilia_latipinna
ENSRNOG00000014235	Zgpat	100	50.469	ENSPMEG00000019064	zgpat	100	50.657	Poecilia_mexicana
ENSRNOG00000014235	Zgpat	100	50.094	ENSPREG00000010919	zgpat	100	50.094	Poecilia_reticulata
ENSRNOG00000014235	Zgpat	100	77.778	ENSPPYG00000011246	ZGPAT	100	77.778	Pongo_abelii
ENSRNOG00000014235	Zgpat	70	66.484	ENSPCAG00000001883	-	100	66.484	Procavia_capensis
ENSRNOG00000014235	Zgpat	100	79.884	ENSPCOG00000012369	ZGPAT	100	80.077	Propithecus_coquereli
ENSRNOG00000014235	Zgpat	100	68.945	ENSPVAG00000013489	-	100	68.482	Pteropus_vampyrus
ENSRNOG00000014235	Zgpat	100	49.807	ENSPNYG00000013216	zgpat	100	49.165	Pundamilia_nyererei
ENSRNOG00000014235	Zgpat	100	49.621	ENSPNAG00000012769	zgpat	100	49.621	Pygocentrus_nattereri
ENSRNOG00000014235	Zgpat	100	79.216	ENSRBIG00000034134	ZGPAT	100	79.216	Rhinopithecus_bieti
ENSRNOG00000014235	Zgpat	100	78.906	ENSRROG00000039084	ZGPAT	100	79.688	Rhinopithecus_roxellana
ENSRNOG00000014235	Zgpat	100	77.495	ENSSBOG00000028752	ZGPAT	100	78.278	Saimiri_boliviensis_boliviensis
ENSRNOG00000014235	Zgpat	100	64.394	ENSSHAG00000017828	-	100	64.176	Sarcophilus_harrisii
ENSRNOG00000014235	Zgpat	100	47.920	ENSSFOG00015000739	zgpat	100	48.529	Scleropages_formosus
ENSRNOG00000014235	Zgpat	100	46.828	ENSSMAG00000006646	zgpat	100	47.842	Scophthalmus_maximus
ENSRNOG00000014235	Zgpat	100	48.231	ENSSDUG00000014684	zgpat	100	47.985	Seriola_dumerili
ENSRNOG00000014235	Zgpat	100	47.786	ENSSLDG00000019446	zgpat	100	48.614	Seriola_lalandi_dorsalis
ENSRNOG00000014235	Zgpat	100	59.563	ENSSPUG00000018516	-	100	60.036	Sphenodon_punctatus
ENSRNOG00000014235	Zgpat	100	48.785	ENSSPAG00000022473	zgpat	100	50.093	Stegastes_partitus
ENSRNOG00000014235	Zgpat	100	76.023	ENSSSCG00000036595	-	100	76.608	Sus_scrofa
ENSRNOG00000014235	Zgpat	100	65.709	ENSTGUG00000007115	-	100	64.943	Taeniopygia_guttata
ENSRNOG00000014235	Zgpat	100	50.188	ENSTRUG00000010488	zgpat	100	50.282	Takifugu_rubripes
ENSRNOG00000014235	Zgpat	100	51.657	ENSTNIG00000004165	zgpat	100	51.267	Tetraodon_nigroviridis
ENSRNOG00000014235	Zgpat	70	79.452	ENSTTRG00000012223	-	71	78.904	Tursiops_truncatus
ENSRNOG00000014235	Zgpat	100	77.193	ENSUAMG00000009298	-	100	76.803	Ursus_americanus
ENSRNOG00000014235	Zgpat	100	77.344	ENSUMAG00000022033	-	100	77.539	Ursus_maritimus
ENSRNOG00000014235	Zgpat	100	72.745	ENSVVUG00000015014	-	100	72.157	Vulpes_vulpes
ENSRNOG00000014235	Zgpat	100	51.028	ENSXMAG00000004759	zgpat	100	50.654	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	IEA	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	IEA	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	-	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0007175	negative regulation of epidermal growth factor-activated receptor activity	-	ISO	Process
GO:0007175	negative regulation of epidermal growth factor-activated receptor activity	-	ISS	Process
GO:0043565	sequence-specific DNA binding	-	ISO	Function
GO:0043565	sequence-specific DNA binding	-	ISS	Function
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function