EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014274 (Gene tree)
Gene ID: 362586
Gene Symbol: Trit1
Alias: LOC362586
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 43503 bases
Position: chr5:140712583-140756085
Accession: 1304781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000019587	IPPT	PF01715.17	1.4e-59	1	1
ENSRNOP00000019587	zf-C2H2_jaz	PF12171.8	2.8e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000019587	-	2113	XM_006238804	ENSRNOP00000019587	479 (aa)	XP_006238866	D4A175

Gene Model

Click here to download ENSRNOG00000014274's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014274	Trit1	100	85.863	ENSG00000043514	TRIT1	100	86.364	Homo_sapiens
ENSRNOG00000014274	Trit1	89	62.442	ENSAPOG00000020918	trit1	93	61.348	Acanthochromis_polyacanthus
ENSRNOG00000014274	Trit1	100	83.368	ENSAMEG00000004342	TRIT1	100	83.368	Ailuropoda_melanoleuca
ENSRNOG00000014274	Trit1	84	62.189	ENSACIG00000017409	trit1	89	60.870	Amphilophus_citrinellus
ENSRNOG00000014274	Trit1	89	62.442	ENSAOCG00000009850	trit1	87	62.442	Amphiprion_ocellaris
ENSRNOG00000014274	Trit1	89	62.442	ENSAPEG00000001481	trit1	87	62.442	Amphiprion_percula
ENSRNOG00000014274	Trit1	95	57.143	ENSATEG00000005426	trit1	91	58.705	Anabas_testudineus
ENSRNOG00000014274	Trit1	71	66.000	ENSAPLG00000011421	TRIT1	99	66.000	Anas_platyrhynchos
ENSRNOG00000014274	Trit1	87	69.762	ENSACAG00000002280	TRIT1	83	69.762	Anolis_carolinensis
ENSRNOG00000014274	Trit1	100	84.407	ENSANAG00000030732	TRIT1	100	85.152	Aotus_nancymaae
ENSRNOG00000014274	Trit1	87	60.142	ENSACLG00000004920	trit1	86	60.142	Astatotilapia_calliptera
ENSRNOG00000014274	Trit1	96	58.244	ENSAMXG00000010959	trit1	96	59.060	Astyanax_mexicanus
ENSRNOG00000014274	Trit1	100	83.784	ENSBTAG00000013832	TRIT1	100	83.784	Bos_taurus
ENSRNOG00000014274	Trit1	85	32.941	WBGene00001740	gro-1	95	32.574	Caenorhabditis_elegans
ENSRNOG00000014274	Trit1	100	83.992	ENSCJAG00000002620	TRIT1	100	84.848	Callithrix_jacchus
ENSRNOG00000014274	Trit1	100	84.200	ENSCAFG00000003048	TRIT1	100	84.200	Canis_familiaris
ENSRNOG00000014274	Trit1	100	83.610	ENSCAFG00020003875	TRIT1	97	87.216	Canis_lupus_dingo
ENSRNOG00000014274	Trit1	98	82.875	ENSCHIG00000013259	TRIT1	98	82.875	Capra_hircus
ENSRNOG00000014274	Trit1	97	84.402	ENSTSYG00000004363	TRIT1	100	86.061	Carlito_syrichta
ENSRNOG00000014274	Trit1	75	83.008	ENSCAPG00000017001	TRIT1	93	83.008	Cavia_aperea
ENSRNOG00000014274	Trit1	100	81.913	ENSCPOG00000012820	TRIT1	100	81.913	Cavia_porcellus
ENSRNOG00000014274	Trit1	100	83.160	ENSCCAG00000031271	TRIT1	100	83.636	Cebus_capucinus
ENSRNOG00000014274	Trit1	99	81.458	ENSCATG00000034344	TRIT1	97	86.610	Cercocebus_atys
ENSRNOG00000014274	Trit1	100	81.497	ENSCLAG00000009828	TRIT1	100	81.497	Chinchilla_lanigera
ENSRNOG00000014274	Trit1	88	84.000	ENSCSAG00000001137	TRIT1	100	84.000	Chlorocebus_sabaeus
ENSRNOG00000014274	Trit1	97	81.156	ENSCHOG00000000435	TRIT1	100	81.081	Choloepus_hoffmanni
ENSRNOG00000014274	Trit1	89	41.972	ENSCSAVG00000002050	-	92	41.972	Ciona_savignyi
ENSRNOG00000014274	Trit1	100	83.576	ENSCANG00000043008	TRIT1	100	83.636	Colobus_angolensis_palliatus
ENSRNOG00000014274	Trit1	100	87.318	ENSCGRG00001001894	Trit1	100	87.318	Cricetulus_griseus_chok1gshd
ENSRNOG00000014274	Trit1	89	85.948	ENSCGRG00000007059	Trit1	91	85.816	Cricetulus_griseus_crigri
ENSRNOG00000014274	Trit1	88	58.837	ENSCSEG00000009574	trit1	88	60.563	Cynoglossus_semilaevis
ENSRNOG00000014274	Trit1	89	60.138	ENSDARG00000032876	trit1	95	62.195	Danio_rerio
ENSRNOG00000014274	Trit1	97	74.038	ENSDNOG00000001994	TRIT1	100	74.157	Dasypus_novemcinctus
ENSRNOG00000014274	Trit1	96	76.026	ENSDORG00000012449	Trit1	97	76.026	Dipodomys_ordii
ENSRNOG00000014274	Trit1	90	38.793	FBgn0043799	CG31381	97	37.888	Drosophila_melanogaster
ENSRNOG00000014274	Trit1	87	86.698	ENSETEG00000008733	TRIT1	98	86.698	Echinops_telfairi
ENSRNOG00000014274	Trit1	93	51.656	ENSEBUG00000012845	trit1	98	51.656	Eptatretus_burgeri
ENSRNOG00000014274	Trit1	98	84.110	ENSECAG00000010597	TRIT1	92	84.407	Equus_caballus
ENSRNOG00000014274	Trit1	100	64.657	ENSEEUG00000009269	TRIT1	100	64.657	Erinaceus_europaeus
ENSRNOG00000014274	Trit1	91	54.195	ENSELUG00000017278	trit1	84	55.582	Esox_lucius
ENSRNOG00000014274	Trit1	97	83.761	ENSFCAG00000006029	TRIT1	100	83.636	Felis_catus
ENSRNOG00000014274	Trit1	84	71.605	ENSFALG00000000532	TRIT1	97	71.605	Ficedula_albicollis
ENSRNOG00000014274	Trit1	94	82.819	ENSFDAG00000003098	TRIT1	99	82.819	Fukomys_damarensis
ENSRNOG00000014274	Trit1	68	54.601	ENSFHEG00000022274	trit1	94	54.601	Fundulus_heteroclitus
ENSRNOG00000014274	Trit1	91	60.938	ENSGMOG00000006522	trit1	96	62.850	Gadus_morhua
ENSRNOG00000014274	Trit1	92	71.461	ENSGALG00000003851	TRIT1	89	74.408	Gallus_gallus
ENSRNOG00000014274	Trit1	75	59.722	ENSGAFG00000018636	trit1	96	57.143	Gambusia_affinis
ENSRNOG00000014274	Trit1	91	61.124	ENSGACG00000008493	trit1	98	61.276	Gasterosteus_aculeatus
ENSRNOG00000014274	Trit1	86	72.422	ENSGAGG00000000522	TRIT1	99	72.422	Gopherus_agassizii
ENSRNOG00000014274	Trit1	100	85.863	ENSGGOG00000010070	TRIT1	100	86.364	Gorilla_gorilla
ENSRNOG00000014274	Trit1	87	60.613	ENSHBUG00000018999	trit1	86	60.613	Haplochromis_burtoni
ENSRNOG00000014274	Trit1	97	81.720	ENSHGLG00000010308	-	97	81.720	Heterocephalus_glaber_female
ENSRNOG00000014274	Trit1	97	73.348	ENSHGLG00000009564	-	98	73.305	Heterocephalus_glaber_female
ENSRNOG00000014274	Trit1	99	82.068	ENSHGLG00100015382	-	99	82.068	Heterocephalus_glaber_male
ENSRNOG00000014274	Trit1	63	80.000	ENSHGLG00100018159	-	91	80.000	Heterocephalus_glaber_male
ENSRNOG00000014274	Trit1	88	62.500	ENSHCOG00000006755	trit1	82	62.945	Hippocampus_comes
ENSRNOG00000014274	Trit1	95	58.963	ENSIPUG00000021822	trit1	93	58.963	Ictalurus_punctatus
ENSRNOG00000014274	Trit1	100	83.368	ENSSTOG00000006446	TRIT1	97	83.368	Ictidomys_tridecemlineatus
ENSRNOG00000014274	Trit1	96	79.698	ENSJJAG00000000316	-	99	79.698	Jaculus_jaculus
ENSRNOG00000014274	Trit1	98	76.907	ENSJJAG00000000300	-	98	76.907	Jaculus_jaculus
ENSRNOG00000014274	Trit1	87	62.884	ENSKMAG00000021788	trit1	86	62.884	Kryptolebias_marmoratus
ENSRNOG00000014274	Trit1	91	60.722	ENSLBEG00000024262	trit1	85	62.322	Labrus_bergylta
ENSRNOG00000014274	Trit1	88	66.204	ENSLACG00000013861	TRIT1	86	66.204	Latimeria_chalumnae
ENSRNOG00000014274	Trit1	95	59.436	ENSLOCG00000002057	trit1	90	60.959	Lepisosteus_oculatus
ENSRNOG00000014274	Trit1	100	83.368	ENSLAFG00000016876	TRIT1	100	83.368	Loxodonta_africana
ENSRNOG00000014274	Trit1	100	84.615	ENSMFAG00000001316	TRIT1	100	85.152	Macaca_fascicularis
ENSRNOG00000014274	Trit1	100	84.615	ENSMMUG00000016220	TRIT1	100	85.152	Macaca_mulatta
ENSRNOG00000014274	Trit1	100	84.615	ENSMNEG00000023137	TRIT1	100	85.152	Macaca_nemestrina
ENSRNOG00000014274	Trit1	99	84.583	ENSMLEG00000035296	TRIT1	99	85.106	Mandrillus_leucophaeus
ENSRNOG00000014274	Trit1	92	60.000	ENSMAMG00000005868	trit1	90	59.202	Mastacembelus_armatus
ENSRNOG00000014274	Trit1	87	59.906	ENSMZEG00005011506	trit1	86	59.906	Maylandia_zebra
ENSRNOG00000014274	Trit1	80	72.208	ENSMGAG00000005516	TRIT1	99	72.208	Meleagris_gallopavo
ENSRNOG00000014274	Trit1	100	88.150	ENSMAUG00000000399	Trit1	100	88.150	Mesocricetus_auratus
ENSRNOG00000014274	Trit1	97	84.368	ENSMICG00000016294	TRIT1	100	84.545	Microcebus_murinus
ENSRNOG00000014274	Trit1	100	86.902	ENSMOCG00000008173	Trit1	100	86.902	Microtus_ochrogaster
ENSRNOG00000014274	Trit1	82	60.453	ENSMMOG00000021140	trit1	89	60.453	Mola_mola
ENSRNOG00000014274	Trit1	92	75.676	ENSMODG00000017650	TRIT1	95	75.676	Monodelphis_domestica
ENSRNOG00000014274	Trit1	92	59.101	ENSMALG00000017843	trit1	92	58.315	Monopterus_albus
ENSRNOG00000014274	Trit1	100	90.021	MGP_CAROLIEiJ_G0026428	Trit1	100	90.021	Mus_caroli
ENSRNOG00000014274	Trit1	100	90.229	ENSMUSG00000028653	Trit1	100	90.229	Mus_musculus
ENSRNOG00000014274	Trit1	100	89.397	MGP_PahariEiJ_G0028758	Trit1	100	89.397	Mus_pahari
ENSRNOG00000014274	Trit1	100	90.229	MGP_SPRETEiJ_G0027408	Trit1	100	90.229	Mus_spretus
ENSRNOG00000014274	Trit1	100	84.407	ENSMPUG00000014291	TRIT1	100	84.407	Mustela_putorius_furo
ENSRNOG00000014274	Trit1	98	81.356	ENSMLUG00000000334	TRIT1	98	81.356	Myotis_lucifugus
ENSRNOG00000014274	Trit1	100	85.655	ENSNLEG00000012038	TRIT1	100	86.061	Nomascus_leucogenys
ENSRNOG00000014274	Trit1	94	66.740	ENSMEUG00000005217	TRIT1	95	66.740	Notamacropus_eugenii
ENSRNOG00000014274	Trit1	74	69.231	ENSOPRG00000003205	-	73	69.231	Ochotona_princeps
ENSRNOG00000014274	Trit1	99	81.667	ENSODEG00000006117	TRIT1	99	81.667	Octodon_degus
ENSRNOG00000014274	Trit1	87	61.085	ENSONIG00000015407	trit1	87	61.085	Oreochromis_niloticus
ENSRNOG00000014274	Trit1	80	74.545	ENSOANG00000002779	TRIT1	96	73.657	Ornithorhynchus_anatinus
ENSRNOG00000014274	Trit1	97	84.615	ENSOCUG00000002054	TRIT1	100	84.615	Oryctolagus_cuniculus
ENSRNOG00000014274	Trit1	90	61.697	ENSORLG00000005802	trit1	92	61.503	Oryzias_latipes
ENSRNOG00000014274	Trit1	90	61.239	ENSORLG00020005519	trit1	92	61.187	Oryzias_latipes_hni
ENSRNOG00000014274	Trit1	93	59.382	ENSORLG00015018715	trit1	92	60.731	Oryzias_latipes_hsok
ENSRNOG00000014274	Trit1	93	60.089	ENSOMEG00000006569	trit1	93	60.360	Oryzias_melastigma
ENSRNOG00000014274	Trit1	97	82.906	ENSOGAG00000009571	TRIT1	100	82.780	Otolemur_garnettii
ENSRNOG00000014274	Trit1	98	83.051	ENSOARG00000020140	TRIT1	98	83.051	Ovis_aries
ENSRNOG00000014274	Trit1	100	85.863	ENSPPAG00000023930	TRIT1	100	86.364	Pan_paniscus
ENSRNOG00000014274	Trit1	97	83.974	ENSPPRG00000009680	TRIT1	100	83.939	Panthera_pardus
ENSRNOG00000014274	Trit1	97	83.974	ENSPTIG00000021134	TRIT1	100	83.939	Panthera_tigris_altaica
ENSRNOG00000014274	Trit1	100	85.863	ENSPTRG00000000579	TRIT1	100	86.364	Pan_troglodytes
ENSRNOG00000014274	Trit1	100	84.407	ENSPANG00000018125	TRIT1	100	84.848	Papio_anubis
ENSRNOG00000014274	Trit1	80	58.290	ENSPKIG00000024527	trit1	95	58.290	Paramormyrops_kingsleyae
ENSRNOG00000014274	Trit1	58	77.551	ENSPSIG00000017073	TRIT1	90	77.551	Pelodiscus_sinensis
ENSRNOG00000014274	Trit1	87	57.143	ENSPMGG00000018445	trit1	98	57.143	Periophthalmus_magnuspinnatus
ENSRNOG00000014274	Trit1	100	88.981	ENSPEMG00000022418	Trit1	100	88.981	Peromyscus_maniculatus_bairdii
ENSRNOG00000014274	Trit1	84	56.174	ENSPMAG00000008892	trit1	100	56.174	Petromyzon_marinus
ENSRNOG00000014274	Trit1	91	75.391	ENSPCIG00000020666	TRIT1	96	74.890	Phascolarctos_cinereus
ENSRNOG00000014274	Trit1	87	61.502	ENSPFOG00000014626	trit1	87	61.502	Poecilia_formosa
ENSRNOG00000014274	Trit1	71	61.224	ENSPLAG00000011669	trit1	94	61.224	Poecilia_latipinna
ENSRNOG00000014274	Trit1	57	59.712	ENSPMEG00000023788	trit1	96	59.712	Poecilia_mexicana
ENSRNOG00000014274	Trit1	67	63.580	ENSPREG00000018182	trit1	87	63.580	Poecilia_reticulata
ENSRNOG00000014274	Trit1	100	85.239	ENSPPYG00000001499	TRIT1	100	85.239	Pongo_abelii
ENSRNOG00000014274	Trit1	75	72.500	ENSPCAG00000014680	TRIT1	99	72.500	Procavia_capensis
ENSRNOG00000014274	Trit1	97	84.797	ENSPCOG00000014150	TRIT1	98	85.933	Propithecus_coquereli
ENSRNOG00000014274	Trit1	97	73.448	ENSPVAG00000003344	TRIT1	100	73.181	Pteropus_vampyrus
ENSRNOG00000014274	Trit1	62	61.184	ENSPNYG00000001003	trit1	94	61.184	Pundamilia_nyererei
ENSRNOG00000014274	Trit1	92	57.978	ENSPNAG00000009466	trit1	89	61.475	Pygocentrus_nattereri
ENSRNOG00000014274	Trit1	100	83.576	ENSRBIG00000043179	TRIT1	100	83.636	Rhinopithecus_bieti
ENSRNOG00000014274	Trit1	100	83.576	ENSRROG00000042670	TRIT1	100	83.636	Rhinopithecus_roxellana
ENSRNOG00000014274	Trit1	88	32.273	YOR274W	-	94	32.273	Saccharomyces_cerevisiae
ENSRNOG00000014274	Trit1	100	83.160	ENSSBOG00000024417	TRIT1	97	86.364	Saimiri_boliviensis_boliviensis
ENSRNOG00000014274	Trit1	89	72.261	ENSSHAG00000018363	TRIT1	99	72.261	Sarcophilus_harrisii
ENSRNOG00000014274	Trit1	92	59.184	ENSSFOG00015007284	trit1	81	60.142	Scleropages_formosus
ENSRNOG00000014274	Trit1	91	60.407	ENSSMAG00000020730	trit1	86	61.939	Scophthalmus_maximus
ENSRNOG00000014274	Trit1	87	61.321	ENSSDUG00000001683	trit1	85	61.321	Seriola_dumerili
ENSRNOG00000014274	Trit1	84	61.179	ENSSLDG00000008379	trit1	85	60.849	Seriola_lalandi_dorsalis
ENSRNOG00000014274	Trit1	97	82.479	ENSSARG00000004540	TRIT1	100	82.328	Sorex_araneus
ENSRNOG00000014274	Trit1	88	66.353	ENSSPUG00000003472	TRIT1	84	66.353	Sphenodon_punctatus
ENSRNOG00000014274	Trit1	84	63.391	ENSSPAG00000020745	trit1	88	63.391	Stegastes_partitus
ENSRNOG00000014274	Trit1	80	69.231	ENSTGUG00000001242	TRIT1	100	69.231	Taeniopygia_guttata
ENSRNOG00000014274	Trit1	87	60.714	ENSTRUG00000013936	trit1	90	60.714	Takifugu_rubripes
ENSRNOG00000014274	Trit1	94	56.674	ENSTNIG00000009240	trit1	93	58.277	Tetraodon_nigroviridis
ENSRNOG00000014274	Trit1	78	92.708	ENSTBEG00000001317	TRIT1	83	86.726	Tupaia_belangeri
ENSRNOG00000014274	Trit1	97	83.940	ENSTTRG00000005064	TRIT1	100	83.368	Tursiops_truncatus
ENSRNOG00000014274	Trit1	56	81.985	ENSUAMG00000000522	-	99	81.754	Ursus_americanus
ENSRNOG00000014274	Trit1	97	83.761	ENSUMAG00000017299	TRIT1	90	83.576	Ursus_maritimus
ENSRNOG00000014274	Trit1	98	78.602	ENSVPAG00000003008	TRIT1	98	78.602	Vicugna_pacos
ENSRNOG00000014274	Trit1	89	63.844	ENSXETG00000010952	trit1	92	63.844	Xenopus_tropicalis
ENSRNOG00000014274	Trit1	68	63.636	ENSXMAG00000016302	trit1	87	63.636	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0006400	tRNA modification	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0052381	tRNA dimethylallyltransferase activity	21873635.	IBA	Function
GO:0052381	tRNA dimethylallyltransferase activity	-	ISO	Function