EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014483 (Gene tree)
Gene ID: 296084
Gene Symbol: Ino80
Alias: Inoc1|LOC296084|RGD1310969
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 78832 bases
Position: chr3:111187711-111266542
Accession: 1310969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000035575	ResIII	PF04851.15	6.2e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000031672	-	4677	-	ENSRNOP00000035575	1559 (aa)	-	D4A6Q6

Gene Model

Click here to download ENSRNOG00000014483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014483	Ino80	100	96.665	ENSG00000128908	INO80	100	96.665	Homo_sapiens
ENSRNOG00000014483	Ino80	73	70.244	ENSAPOG00000012586	ino80	99	69.721	Acanthochromis_polyacanthus
ENSRNOG00000014483	Ino80	100	96.669	ENSAMEG00000016796	INO80	100	96.669	Ailuropoda_melanoleuca
ENSRNOG00000014483	Ino80	91	74.113	ENSACIG00000001918	ino80	98	72.746	Amphilophus_citrinellus
ENSRNOG00000014483	Ino80	98	73.779	ENSAOCG00000000490	ino80	99	72.170	Amphiprion_ocellaris
ENSRNOG00000014483	Ino80	97	74.512	ENSAPEG00000022911	ino80	99	72.503	Amphiprion_percula
ENSRNOG00000014483	Ino80	98	73.338	ENSATEG00000001271	ino80	99	71.932	Anabas_testudineus
ENSRNOG00000014483	Ino80	100	89.750	ENSAPLG00000013656	INO80	100	89.750	Anas_platyrhynchos
ENSRNOG00000014483	Ino80	91	87.597	ENSACAG00000003531	INO80	99	87.738	Anolis_carolinensis
ENSRNOG00000014483	Ino80	100	96.408	ENSANAG00000032223	INO80	100	96.408	Aotus_nancymaae
ENSRNOG00000014483	Ino80	91	71.508	ENSACLG00000006610	ino80	99	70.468	Astatotilapia_calliptera
ENSRNOG00000014483	Ino80	100	95.530	ENSBTAG00000010380	INO80	100	95.913	Bos_taurus
ENSRNOG00000014483	Ino80	100	96.408	ENSCJAG00000020770	-	100	96.408	Callithrix_jacchus
ENSRNOG00000014483	Ino80	100	96.731	ENSCAFG00000009492	INO80	100	96.731	Canis_familiaris
ENSRNOG00000014483	Ino80	70	96.360	ENSCAFG00020005524	-	99	96.360	Canis_lupus_dingo
ENSRNOG00000014483	Ino80	100	95.900	ENSCHIG00000010246	INO80	100	96.041	Capra_hircus
ENSRNOG00000014483	Ino80	100	96.985	ENSTSYG00000003252	INO80	100	96.985	Carlito_syrichta
ENSRNOG00000014483	Ino80	100	96.793	ENSCPOG00000011386	INO80	100	96.793	Cavia_porcellus
ENSRNOG00000014483	Ino80	100	96.023	ENSCCAG00000030680	INO80	100	95.574	Cebus_capucinus
ENSRNOG00000014483	Ino80	100	96.600	ENSCATG00000040663	INO80	100	96.600	Cercocebus_atys
ENSRNOG00000014483	Ino80	100	96.665	ENSCLAG00000008397	INO80	100	96.665	Chinchilla_lanigera
ENSRNOG00000014483	Ino80	100	96.665	ENSCSAG00000007632	INO80	100	96.665	Chlorocebus_sabaeus
ENSRNOG00000014483	Ino80	65	96.154	ENSCHOG00000011938	INO80	77	96.154	Choloepus_hoffmanni
ENSRNOG00000014483	Ino80	100	89.942	ENSCPBG00000013491	INO80	100	89.942	Chrysemys_picta_bellii
ENSRNOG00000014483	Ino80	100	90.058	ENSCANG00000036208	INO80	100	88.726	Colobus_angolensis_palliatus
ENSRNOG00000014483	Ino80	100	98.332	ENSCGRG00001013566	Ino80	100	98.332	Cricetulus_griseus_chok1gshd
ENSRNOG00000014483	Ino80	100	98.332	ENSCGRG00000001290	Ino80	100	98.332	Cricetulus_griseus_crigri
ENSRNOG00000014483	Ino80	84	74.703	ENSCSEG00000019370	ino80	94	74.315	Cynoglossus_semilaevis
ENSRNOG00000014483	Ino80	97	73.565	ENSCVAG00000021470	ino80	97	73.199	Cyprinodon_variegatus
ENSRNOG00000014483	Ino80	97	75.360	ENSDARG00000070432	ino80	97	75.428	Danio_rerio
ENSRNOG00000014483	Ino80	100	96.600	ENSDNOG00000010267	INO80	100	96.600	Dasypus_novemcinctus
ENSRNOG00000014483	Ino80	62	65.684	ENSEBUG00000001921	ino80	96	65.308	Eptatretus_burgeri
ENSRNOG00000014483	Ino80	100	96.348	ENSEASG00005016405	INO80	100	96.348	Equus_asinus_asinus
ENSRNOG00000014483	Ino80	91	72.765	ENSELUG00000001071	ino80	96	72.226	Esox_lucius
ENSRNOG00000014483	Ino80	100	96.797	ENSFCAG00000014722	INO80	100	96.797	Felis_catus
ENSRNOG00000014483	Ino80	100	88.725	ENSFALG00000006125	INO80	100	88.533	Ficedula_albicollis
ENSRNOG00000014483	Ino80	99	96.344	ENSFDAG00000005624	INO80	99	96.344	Fukomys_damarensis
ENSRNOG00000014483	Ino80	61	74.828	ENSFHEG00000020436	ino80	88	74.142	Fundulus_heteroclitus
ENSRNOG00000014483	Ino80	87	71.306	ENSGMOG00000006031	ino80	99	71.090	Gadus_morhua
ENSRNOG00000014483	Ino80	100	89.686	ENSGALG00000008553	INO80	100	89.686	Gallus_gallus
ENSRNOG00000014483	Ino80	97	74.045	ENSGAFG00000006358	ino80	98	74.521	Gambusia_affinis
ENSRNOG00000014483	Ino80	97	71.483	ENSGACG00000012960	ino80	99	69.525	Gasterosteus_aculeatus
ENSRNOG00000014483	Ino80	95	90.805	ENSGAGG00000019203	INO80	99	90.805	Gopherus_agassizii
ENSRNOG00000014483	Ino80	95	74.587	ENSHBUG00000022614	ino80	99	73.729	Haplochromis_burtoni
ENSRNOG00000014483	Ino80	100	95.895	ENSHGLG00000018136	INO80	100	95.895	Heterocephalus_glaber_female
ENSRNOG00000014483	Ino80	100	95.253	ENSHGLG00100006571	INO80	100	94.933	Heterocephalus_glaber_male
ENSRNOG00000014483	Ino80	97	73.688	ENSHCOG00000002445	ino80	96	73.527	Hippocampus_comes
ENSRNOG00000014483	Ino80	93	73.613	ENSIPUG00000018905	ino80	97	73.681	Ictalurus_punctatus
ENSRNOG00000014483	Ino80	100	97.115	ENSSTOG00000000427	INO80	100	97.115	Ictidomys_tridecemlineatus
ENSRNOG00000014483	Ino80	100	91.661	ENSJJAG00000016166	Ino80	100	90.827	Jaculus_jaculus
ENSRNOG00000014483	Ino80	91	73.310	ENSKMAG00000019273	ino80	99	72.215	Kryptolebias_marmoratus
ENSRNOG00000014483	Ino80	91	72.349	ENSLBEG00000024288	ino80	97	71.641	Labrus_bergylta
ENSRNOG00000014483	Ino80	98	73.493	ENSLACG00000008666	INO80	99	73.299	Latimeria_chalumnae
ENSRNOG00000014483	Ino80	100	77.558	ENSLOCG00000012304	ino80	100	77.174	Lepisosteus_oculatus
ENSRNOG00000014483	Ino80	100	96.216	ENSLAFG00000009951	INO80	100	95.831	Loxodonta_africana
ENSRNOG00000014483	Ino80	100	96.729	ENSMFAG00000044488	INO80	100	96.729	Macaca_fascicularis
ENSRNOG00000014483	Ino80	100	96.729	ENSMMUG00000001737	INO80	100	96.729	Macaca_mulatta
ENSRNOG00000014483	Ino80	100	96.536	ENSMNEG00000034906	INO80	100	96.536	Macaca_nemestrina
ENSRNOG00000014483	Ino80	100	96.729	ENSMLEG00000042117	INO80	100	96.729	Mandrillus_leucophaeus
ENSRNOG00000014483	Ino80	71	65.264	ENSMAMG00000013786	ino80	99	65.085	Mastacembelus_armatus
ENSRNOG00000014483	Ino80	91	74.054	ENSMZEG00005013146	ino80	99	72.835	Maylandia_zebra
ENSRNOG00000014483	Ino80	84	90.708	ENSMGAG00000011164	INO80	99	90.115	Meleagris_gallopavo
ENSRNOG00000014483	Ino80	100	97.114	ENSMAUG00000020670	Ino80	100	97.114	Mesocricetus_auratus
ENSRNOG00000014483	Ino80	100	96.023	ENSMICG00000005801	INO80	100	96.023	Microcebus_murinus
ENSRNOG00000014483	Ino80	100	98.589	ENSMOCG00000016879	Ino80	100	98.589	Microtus_ochrogaster
ENSRNOG00000014483	Ino80	70	66.000	ENSMMOG00000015046	ino80	98	65.455	Mola_mola
ENSRNOG00000014483	Ino80	100	93.530	ENSMODG00000000184	INO80	100	93.274	Monodelphis_domestica
ENSRNOG00000014483	Ino80	91	72.230	ENSMALG00000016488	ino80	98	75.957	Monopterus_albus
ENSRNOG00000014483	Ino80	100	95.723	MGP_CAROLIEiJ_G0024144	Ino80	100	95.723	Mus_caroli
ENSRNOG00000014483	Ino80	100	98.910	ENSMUSG00000034154	Ino80	100	98.910	Mus_musculus
ENSRNOG00000014483	Ino80	100	98.461	MGP_PahariEiJ_G0025587	Ino80	100	98.461	Mus_pahari
ENSRNOG00000014483	Ino80	100	98.845	MGP_SPRETEiJ_G0025060	Ino80	100	98.845	Mus_spretus
ENSRNOG00000014483	Ino80	100	96.733	ENSMPUG00000008786	INO80	100	96.733	Mustela_putorius_furo
ENSRNOG00000014483	Ino80	100	95.982	ENSMLUG00000017764	INO80	100	95.982	Myotis_lucifugus
ENSRNOG00000014483	Ino80	100	97.119	ENSNGAG00000019497	Ino80	100	97.119	Nannospalax_galili
ENSRNOG00000014483	Ino80	91	69.682	ENSNBRG00000022086	ino80	99	69.029	Neolamprologus_brichardi
ENSRNOG00000014483	Ino80	100	94.548	ENSNLEG00000003454	INO80	100	94.163	Nomascus_leucogenys
ENSRNOG00000014483	Ino80	91	78.142	ENSOPRG00000000831	INO80	91	78.142	Ochotona_princeps
ENSRNOG00000014483	Ino80	100	96.023	ENSODEG00000016734	INO80	100	96.023	Octodon_degus
ENSRNOG00000014483	Ino80	98	73.852	ENSONIG00000000772	ino80	99	72.590	Oreochromis_niloticus
ENSRNOG00000014483	Ino80	100	96.600	ENSOCUG00000010763	INO80	100	96.600	Oryctolagus_cuniculus
ENSRNOG00000014483	Ino80	97	71.688	ENSORLG00000018028	ino80	98	71.279	Oryzias_latipes
ENSRNOG00000014483	Ino80	96	72.339	ENSORLG00015012507	ino80	98	71.214	Oryzias_latipes_hsok
ENSRNOG00000014483	Ino80	96	72.280	ENSOMEG00000003791	ino80	96	71.522	Oryzias_melastigma
ENSRNOG00000014483	Ino80	100	96.921	ENSOGAG00000008998	INO80	100	96.921	Otolemur_garnettii
ENSRNOG00000014483	Ino80	100	95.335	ENSOARG00000020323	INO80	100	95.847	Ovis_aries
ENSRNOG00000014483	Ino80	100	96.665	ENSPPAG00000042104	INO80	100	96.665	Pan_paniscus
ENSRNOG00000014483	Ino80	100	96.733	ENSPPRG00000011011	INO80	100	96.733	Panthera_pardus
ENSRNOG00000014483	Ino80	100	96.477	ENSPTIG00000005911	INO80	100	96.477	Panthera_tigris_altaica
ENSRNOG00000014483	Ino80	100	96.729	ENSPTRG00000006939	INO80	100	96.729	Pan_troglodytes
ENSRNOG00000014483	Ino80	100	96.729	ENSPANG00000019131	INO80	100	96.729	Papio_anubis
ENSRNOG00000014483	Ino80	98	75.033	ENSPKIG00000021450	ino80	98	75.248	Paramormyrops_kingsleyae
ENSRNOG00000014483	Ino80	100	88.924	ENSPSIG00000014403	INO80	100	89.245	Pelodiscus_sinensis
ENSRNOG00000014483	Ino80	73	98.594	ENSPEMG00000013114	-	100	98.594	Peromyscus_maniculatus_bairdii
ENSRNOG00000014483	Ino80	100	93.594	ENSPCIG00000027848	INO80	100	93.338	Phascolarctos_cinereus
ENSRNOG00000014483	Ino80	97	72.387	ENSPFOG00000013082	ino80	97	72.273	Poecilia_formosa
ENSRNOG00000014483	Ino80	60	75.321	ENSPMEG00000021422	ino80	85	74.679	Poecilia_mexicana
ENSRNOG00000014483	Ino80	91	73.922	ENSPREG00000013650	ino80	95	73.275	Poecilia_reticulata
ENSRNOG00000014483	Ino80	99	94.337	ENSPPYG00000006368	INO80	99	94.337	Pongo_abelii
ENSRNOG00000014483	Ino80	100	95.061	ENSPCOG00000022332	INO80	100	94.740	Propithecus_coquereli
ENSRNOG00000014483	Ino80	100	94.035	ENSPVAG00000001852	INO80	100	93.650	Pteropus_vampyrus
ENSRNOG00000014483	Ino80	90	71.747	ENSPNYG00000002995	ino80	99	71.088	Pundamilia_nyererei
ENSRNOG00000014483	Ino80	100	74.682	ENSPNAG00000010386	ino80	100	74.729	Pygocentrus_nattereri
ENSRNOG00000014483	Ino80	100	96.600	ENSRBIG00000031765	INO80	100	96.600	Rhinopithecus_bieti
ENSRNOG00000014483	Ino80	100	96.665	ENSRROG00000033143	INO80	100	96.665	Rhinopithecus_roxellana
ENSRNOG00000014483	Ino80	98	95.104	ENSSBOG00000023493	INO80	100	95.104	Saimiri_boliviensis_boliviensis
ENSRNOG00000014483	Ino80	100	93.466	ENSSHAG00000016349	INO80	100	93.209	Sarcophilus_harrisii
ENSRNOG00000014483	Ino80	98	76.159	ENSSFOG00015000183	ino80	99	75.898	Scleropages_formosus
ENSRNOG00000014483	Ino80	97	73.372	ENSSMAG00000007221	ino80	99	71.832	Scophthalmus_maximus
ENSRNOG00000014483	Ino80	98	73.738	ENSSDUG00000009957	ino80	99	72.264	Seriola_dumerili
ENSRNOG00000014483	Ino80	98	71.571	ENSSLDG00000000389	ino80	91	72.252	Seriola_lalandi_dorsalis
ENSRNOG00000014483	Ino80	100	92.569	ENSSARG00000007876	INO80	99	92.889	Sorex_araneus
ENSRNOG00000014483	Ino80	91	72.137	ENSSPAG00000007779	ino80	98	71.910	Stegastes_partitus
ENSRNOG00000014483	Ino80	100	95.785	ENSSSCG00000004753	INO80	100	95.785	Sus_scrofa
ENSRNOG00000014483	Ino80	100	88.661	ENSTGUG00000010786	INO80	100	88.853	Taeniopygia_guttata
ENSRNOG00000014483	Ino80	91	73.829	ENSTRUG00000013026	ino80	98	73.307	Takifugu_rubripes
ENSRNOG00000014483	Ino80	100	94.804	ENSTTRG00000011479	INO80	100	94.419	Tursiops_truncatus
ENSRNOG00000014483	Ino80	73	96.060	ENSUMAG00000012190	-	99	96.060	Ursus_maritimus
ENSRNOG00000014483	Ino80	100	90.250	ENSVPAG00000002838	INO80	100	90.250	Vicugna_pacos
ENSRNOG00000014483	Ino80	100	96.795	ENSVVUG00000026698	INO80	100	96.795	Vulpes_vulpes
ENSRNOG00000014483	Ino80	99	73.094	ENSXETG00000034272	INO80	99	72.582	Xenopus_tropicalis
ENSRNOG00000014483	Ino80	91	74.264	ENSXMAG00000006742	ino80	98	74.035	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000070	mitotic sister chromatid segregation	-	IEA	Process
GO:0000070	mitotic sister chromatid segregation	-	ISO	Process
GO:0000724	double-strand break repair via homologous recombination	-	IEA	Process
GO:0000724	double-strand break repair via homologous recombination	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003677	DNA binding	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006302	double-strand break repair	-	ISO	Process
GO:0006338	chromatin remodeling	21873635.	IBA	Process
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0008094	DNA-dependent ATPase activity	-	ISO	Function
GO:0008150	biological_process	-	ND	Process
GO:0010571	positive regulation of nuclear cell cycle DNA replication	-	IEA	Process
GO:0010571	positive regulation of nuclear cell cycle DNA replication	-	ISO	Process
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0016887	ATPase activity	21873635.	IBA	Function
GO:0030307	positive regulation of cell growth	-	IEA	Process
GO:0030307	positive regulation of cell growth	-	ISO	Process
GO:0031011	Ino80 complex	21873635.	IBA	Component
GO:0031011	Ino80 complex	-	ISO	Component
GO:0032508	DNA duplex unwinding	-	IEA	Process
GO:0034644	cellular response to UV	-	ISO	Process
GO:0042393	histone binding	21873635.	IBA	Function
GO:0042766	nucleosome mobilization	21873635.	IBA	Process
GO:0043014	alpha-tubulin binding	-	IEA	Function
GO:0043014	alpha-tubulin binding	-	ISO	Function
GO:0043044	ATP-dependent chromatin remodeling	21873635.	IBA	Process
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	21873635.	IBA	Process
GO:0045111	intermediate filament cytoskeleton	-	IEA	Component
GO:0045111	intermediate filament cytoskeleton	-	ISO	Component
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0051225	spindle assembly	-	IEA	Process
GO:0051225	spindle assembly	-	ISO	Process
GO:0070914	UV-damage excision repair	-	IEA	Process
GO:0070914	UV-damage excision repair	-	ISO	Process
GO:0071479	cellular response to ionizing radiation	-	IEA	Process
GO:0071479	cellular response to ionizing radiation	-	ISO	Process
GO:2000045	regulation of G1/S transition of mitotic cell cycle	-	IEA	Process
GO:2000045	regulation of G1/S transition of mitotic cell cycle	-	ISO	Process