EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014503 (Gene tree)
Gene ID: 307540
Gene Symbol: Celf4
Alias: Brunol4|LOC307540
Full Name: CUGBP%2C Elav-like family member 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 18843 bases
Position: chr18:17698038-17716880
Accession: 1307630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000057864	RRM_1	PF00076.22	1.9e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000061151	-	990	-	ENSRNOP00000057864	329 (aa)	-	F1M6I9

Gene Model

Click here to download ENSRNOG00000014503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000014503	Celf4	100	57.880	ENSRNOG00000052224	Celf6	87	55.301
ENSRNOG00000014503	Celf4	100	40.420	ENSRNOG00000023661	Celf2	88	38.298
ENSRNOG00000014503	Celf4	83	57.447	ENSRNOG00000004695	Celf5	79	61.135
ENSRNOG00000014503	Celf4	100	60.743	ENSRNOG00000020875	Celf3	95	58.133

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014503	Celf4	100	98.176	ENSG00000101489	CELF4	100	97.744	Homo_sapiens
ENSRNOG00000014503	Celf4	100	73.902	ENSAPOG00000002964	celf4	87	73.127	Acanthochromis_polyacanthus
ENSRNOG00000014503	Celf4	87	97.213	ENSAMEG00000017059	CELF4	80	97.213	Ailuropoda_melanoleuca
ENSRNOG00000014503	Celf4	100	74.545	ENSACIG00000018097	celf4	85	74.242	Amphilophus_citrinellus
ENSRNOG00000014503	Celf4	100	79.091	ENSAOCG00000020590	celf4	87	73.127	Amphiprion_ocellaris
ENSRNOG00000014503	Celf4	72	70.000	ENSAOCG00000019919	-	70	67.391	Amphiprion_ocellaris
ENSRNOG00000014503	Celf4	100	79.091	ENSAPEG00000002940	celf4	67	78.485	Amphiprion_percula
ENSRNOG00000014503	Celf4	100	79.091	ENSATEG00000023731	celf4	68	78.485	Anabas_testudineus
ENSRNOG00000014503	Celf4	100	84.182	ENSAPLG00000007830	-	99	83.646	Anas_platyrhynchos
ENSRNOG00000014503	Celf4	67	87.448	ENSACAG00000012428	CELF4	91	85.590	Anolis_carolinensis
ENSRNOG00000014503	Celf4	100	98.176	ENSANAG00000029499	CELF4	83	98.176	Aotus_nancymaae
ENSRNOG00000014503	Celf4	100	81.714	ENSACLG00000011828	celf4	87	80.857	Astatotilapia_calliptera
ENSRNOG00000014503	Celf4	100	80.606	ENSAMXG00000007935	celf4	89	74.419	Astyanax_mexicanus
ENSRNOG00000014503	Celf4	100	98.176	ENSBTAG00000004940	CELF4	86	98.176	Bos_taurus
ENSRNOG00000014503	Celf4	100	98.176	ENSCJAG00000021135	CELF4	83	98.176	Callithrix_jacchus
ENSRNOG00000014503	Celf4	100	98.176	ENSCHIG00000007169	CELF4	86	98.176	Capra_hircus
ENSRNOG00000014503	Celf4	100	98.176	ENSTSYG00000000816	CELF4	77	98.176	Carlito_syrichta
ENSRNOG00000014503	Celf4	100	92.264	ENSCPOG00000035956	CELF4	73	92.264	Cavia_porcellus
ENSRNOG00000014503	Celf4	100	98.176	ENSCCAG00000028373	CELF4	83	98.176	Cebus_capucinus
ENSRNOG00000014503	Celf4	100	98.176	ENSCATG00000045293	CELF4	83	98.176	Cercocebus_atys
ENSRNOG00000014503	Celf4	100	92.264	ENSCLAG00000008344	CELF4	84	92.264	Chinchilla_lanigera
ENSRNOG00000014503	Celf4	100	91.977	ENSCSAG00000017933	CELF4	98	91.977	Chlorocebus_sabaeus
ENSRNOG00000014503	Celf4	100	96.657	ENSCPBG00000005237	CELF4	91	96.657	Chrysemys_picta_bellii
ENSRNOG00000014503	Celf4	100	98.176	ENSCANG00000036735	CELF4	83	98.176	Colobus_angolensis_palliatus
ENSRNOG00000014503	Celf4	90	91.456	ENSCGRG00001018085	Celf4	75	91.456	Cricetulus_griseus_chok1gshd
ENSRNOG00000014503	Celf4	100	74.160	ENSCSEG00000007074	celf4	83	86.900	Cynoglossus_semilaevis
ENSRNOG00000014503	Celf4	100	79.394	ENSCVAG00000017617	celf4	84	78.788	Cyprinodon_variegatus
ENSRNOG00000014503	Celf4	100	73.902	ENSDARG00000070045	celf4	94	73.385	Danio_rerio
ENSRNOG00000014503	Celf4	100	91.977	ENSDNOG00000032492	CELF4	94	91.977	Dasypus_novemcinctus
ENSRNOG00000014503	Celf4	100	92.264	ENSDORG00000007169	Celf4	84	92.264	Dipodomys_ordii
ENSRNOG00000014503	Celf4	89	69.863	ENSETEG00000007432	-	58	68.421	Echinops_telfairi
ENSRNOG00000014503	Celf4	100	98.176	ENSEASG00005016534	CELF4	86	98.176	Equus_asinus_asinus
ENSRNOG00000014503	Celf4	100	98.176	ENSECAG00000008810	CELF4	83	98.176	Equus_caballus
ENSRNOG00000014503	Celf4	87	86.411	ENSEEUG00000003763	CELF4	65	86.411	Erinaceus_europaeus
ENSRNOG00000014503	Celf4	100	98.176	ENSFCAG00000045234	CELF4	86	98.176	Felis_catus
ENSRNOG00000014503	Celf4	100	91.117	ENSFALG00000009188	CELF4	96	91.117	Ficedula_albicollis
ENSRNOG00000014503	Celf4	100	92.264	ENSFDAG00000010287	CELF4	73	92.264	Fukomys_damarensis
ENSRNOG00000014503	Celf4	99	71.774	ENSFHEG00000003431	celf4	85	72.011	Fundulus_heteroclitus
ENSRNOG00000014503	Celf4	88	82.927	ENSGMOG00000011747	-	72	82.927	Gadus_morhua
ENSRNOG00000014503	Celf4	100	64.948	ENSGMOG00000008703	celf4	60	76.777	Gadus_morhua
ENSRNOG00000014503	Celf4	100	73.643	ENSGAFG00000021515	celf4	85	72.087	Gambusia_affinis
ENSRNOG00000014503	Celf4	100	69.870	ENSGACG00000008752	celf4	73	69.351	Gasterosteus_aculeatus
ENSRNOG00000014503	Celf4	89	95.918	ENSGAGG00000023014	-	98	95.918	Gopherus_agassizii
ENSRNOG00000014503	Celf4	100	60.571	ENSGAGG00000017672	-	81	58.571	Gopherus_agassizii
ENSRNOG00000014503	Celf4	100	98.176	ENSGGOG00000013920	CELF4	83	98.176	Gorilla_gorilla
ENSRNOG00000014503	Celf4	100	81.429	ENSHBUG00000021618	celf4	87	80.857	Haplochromis_burtoni
ENSRNOG00000014503	Celf4	100	97.872	ENSHGLG00000003130	CELF4	83	97.872	Heterocephalus_glaber_female
ENSRNOG00000014503	Celf4	100	92.550	ENSHGLG00100006394	CELF4	83	92.550	Heterocephalus_glaber_male
ENSRNOG00000014503	Celf4	100	78.485	ENSHCOG00000012195	celf4	86	78.182	Hippocampus_comes
ENSRNOG00000014503	Celf4	100	80.909	ENSIPUG00000010810	celf4	80	71.935	Ictalurus_punctatus
ENSRNOG00000014503	Celf4	100	91.977	ENSJJAG00000016892	Celf4	83	91.977	Jaculus_jaculus
ENSRNOG00000014503	Celf4	100	74.018	ENSKMAG00000019602	celf4	88	73.127	Kryptolebias_marmoratus
ENSRNOG00000014503	Celf4	100	79.091	ENSLBEG00000000940	celf4	67	78.485	Labrus_bergylta
ENSRNOG00000014503	Celf4	100	70.077	ENSLOCG00000004792	celf4	94	69.054	Lepisosteus_oculatus
ENSRNOG00000014503	Celf4	100	91.977	ENSLAFG00000021352	CELF4	98	84.571	Loxodonta_africana
ENSRNOG00000014503	Celf4	100	98.176	ENSMFAG00000042983	CELF4	83	98.176	Macaca_fascicularis
ENSRNOG00000014503	Celf4	100	97.872	ENSMMUG00000006866	CELF4	83	97.872	Macaca_mulatta
ENSRNOG00000014503	Celf4	100	98.176	ENSMNEG00000033449	CELF4	86	98.176	Macaca_nemestrina
ENSRNOG00000014503	Celf4	87	99.303	ENSMLEG00000028543	CELF4	67	99.303	Mandrillus_leucophaeus
ENSRNOG00000014503	Celf4	100	79.091	ENSMAMG00000018573	celf4	67	78.485	Mastacembelus_armatus
ENSRNOG00000014503	Celf4	100	79.091	ENSMZEG00005026879	celf4	85	78.182	Maylandia_zebra
ENSRNOG00000014503	Celf4	87	68.858	ENSMGAG00000017029	CELF4	97	68.512	Meleagris_gallopavo
ENSRNOG00000014503	Celf4	100	97.872	ENSMICG00000006984	CELF4	83	97.872	Microcebus_murinus
ENSRNOG00000014503	Celf4	100	92.264	ENSMOCG00000011985	Celf4	84	92.264	Microtus_ochrogaster
ENSRNOG00000014503	Celf4	100	78.485	ENSMMOG00000012281	celf4	85	77.879	Mola_mola
ENSRNOG00000014503	Celf4	88	97.917	ENSMODG00000000306	CELF4	76	97.917	Monodelphis_domestica
ENSRNOG00000014503	Celf4	100	81.714	ENSMALG00000001696	celf4	87	80.857	Monopterus_albus
ENSRNOG00000014503	Celf4	100	98.480	MGP_CAROLIEiJ_G0022058	Celf4	88	98.480	Mus_caroli
ENSRNOG00000014503	Celf4	100	98.176	ENSMUSG00000024268	Celf4	83	98.176	Mus_musculus
ENSRNOG00000014503	Celf4	100	98.480	MGP_PahariEiJ_G0018792	Celf4	88	98.480	Mus_pahari
ENSRNOG00000014503	Celf4	100	98.176	MGP_SPRETEiJ_G0022969	Celf4	91	98.176	Mus_spretus
ENSRNOG00000014503	Celf4	100	73.127	ENSMPUG00000001027	CELF4	92	74.485	Mustela_putorius_furo
ENSRNOG00000014503	Celf4	100	91.117	ENSMLUG00000001755	CELF4	94	91.117	Myotis_lucifugus
ENSRNOG00000014503	Celf4	100	91.977	ENSNGAG00000000761	Celf4	83	91.977	Nannospalax_galili
ENSRNOG00000014503	Celf4	100	79.091	ENSNBRG00000018194	celf4	85	78.182	Neolamprologus_brichardi
ENSRNOG00000014503	Celf4	87	94.774	ENSMEUG00000007202	-	82	94.774	Notamacropus_eugenii
ENSRNOG00000014503	Celf4	100	79.939	ENSOPRG00000014415	CELF4	68	79.939	Ochotona_princeps
ENSRNOG00000014503	Celf4	100	92.264	ENSODEG00000018464	CELF4	84	92.264	Octodon_degus
ENSRNOG00000014503	Celf4	100	86.446	ENSONIG00000019463	celf4	83	85.542	Oreochromis_niloticus
ENSRNOG00000014503	Celf4	98	90.741	ENSOCUG00000024790	CELF4	75	90.741	Oryctolagus_cuniculus
ENSRNOG00000014503	Celf4	100	79.091	ENSORLG00000008913	celf4	82	78.182	Oryzias_latipes
ENSRNOG00000014503	Celf4	100	73.643	ENSORLG00020008454	celf4	87	73.127	Oryzias_latipes_hni
ENSRNOG00000014503	Celf4	100	74.571	ENSORLG00015004115	celf4	86	74.286	Oryzias_latipes_hsok
ENSRNOG00000014503	Celf4	100	79.091	ENSOMEG00000002391	celf4	87	73.127	Oryzias_melastigma
ENSRNOG00000014503	Celf4	100	81.122	ENSOGAG00000010018	CELF4	92	81.122	Otolemur_garnettii
ENSRNOG00000014503	Celf4	89	89.809	ENSOARG00000005276	CELF4	100	89.172	Ovis_aries
ENSRNOG00000014503	Celf4	87	99.303	ENSPPAG00000020644	CELF4	65	99.303	Pan_paniscus
ENSRNOG00000014503	Celf4	100	98.176	ENSPPRG00000007683	CELF4	83	98.176	Panthera_pardus
ENSRNOG00000014503	Celf4	100	98.176	ENSPTRG00000009982	CELF4	83	98.176	Pan_troglodytes
ENSRNOG00000014503	Celf4	100	98.176	ENSPANG00000006365	CELF4	83	98.176	Papio_anubis
ENSRNOG00000014503	Celf4	100	79.091	ENSPKIG00000017421	celf4	88	77.384	Paramormyrops_kingsleyae
ENSRNOG00000014503	Celf4	100	91.117	ENSPSIG00000015538	CELF4	96	91.117	Pelodiscus_sinensis
ENSRNOG00000014503	Celf4	100	92.550	ENSPEMG00000019299	Celf4	84	92.550	Peromyscus_maniculatus_bairdii
ENSRNOG00000014503	Celf4	65	85.514	ENSPLAG00000012151	celf4	71	85.514	Poecilia_latipinna
ENSRNOG00000014503	Celf4	81	82.927	ENSPMEG00000015313	celf4	79	85.714	Poecilia_mexicana
ENSRNOG00000014503	Celf4	100	81.714	ENSPREG00000021231	celf4	87	80.857	Poecilia_reticulata
ENSRNOG00000014503	Celf4	83	100.000	ENSPCAG00000000126	CELF4	68	100.000	Procavia_capensis
ENSRNOG00000014503	Celf4	100	98.176	ENSPVAG00000009204	CELF4	83	98.176	Pteropus_vampyrus
ENSRNOG00000014503	Celf4	100	79.091	ENSPNYG00000004131	celf4	85	78.182	Pundamilia_nyererei
ENSRNOG00000014503	Celf4	100	83.143	ENSPNAG00000006426	celf4	89	82.286	Pygocentrus_nattereri
ENSRNOG00000014503	Celf4	100	98.176	ENSRBIG00000035924	CELF4	86	98.176	Rhinopithecus_bieti
ENSRNOG00000014503	Celf4	100	98.176	ENSRROG00000014839	CELF4	83	98.176	Rhinopithecus_roxellana
ENSRNOG00000014503	Celf4	100	98.176	ENSSBOG00000030001	CELF4	68	98.176	Saimiri_boliviensis_boliviensis
ENSRNOG00000014503	Celf4	87	96.194	ENSSHAG00000009193	CELF4	85	96.194	Sarcophilus_harrisii
ENSRNOG00000014503	Celf4	100	78.632	ENSSFOG00015010874	celf4	87	77.208	Scleropages_formosus
ENSRNOG00000014503	Celf4	100	79.666	ENSSMAG00000009331	celf4	83	86.463	Scophthalmus_maximus
ENSRNOG00000014503	Celf4	99	73.352	ENSSLDG00000018548	celf4	85	73.611	Seriola_lalandi_dorsalis
ENSRNOG00000014503	Celf4	99	71.774	ENSSPAG00000018307	celf4	85	72.011	Stegastes_partitus
ENSRNOG00000014503	Celf4	100	98.176	ENSSSCG00000003748	CELF4	86	98.176	Sus_scrofa
ENSRNOG00000014503	Celf4	100	91.117	ENSTGUG00000001649	CELF4	96	91.117	Taeniopygia_guttata
ENSRNOG00000014503	Celf4	100	75.758	ENSTRUG00000015481	celf4	85	75.152	Takifugu_rubripes
ENSRNOG00000014503	Celf4	99	84.545	ENSTNIG00000010679	celf4	66	84.545	Tetraodon_nigroviridis
ENSRNOG00000014503	Celf4	100	97.872	ENSTBEG00000010647	CELF4	79	97.872	Tupaia_belangeri
ENSRNOG00000014503	Celf4	100	97.872	ENSTTRG00000016826	CELF4	82	97.872	Tursiops_truncatus
ENSRNOG00000014503	Celf4	87	99.652	ENSUAMG00000005506	CELF4	69	99.652	Ursus_americanus
ENSRNOG00000014503	Celf4	75	65.041	ENSVPAG00000009042	-	68	71.292	Vicugna_pacos
ENSRNOG00000014503	Celf4	100	98.176	ENSVVUG00000027721	CELF4	86	98.176	Vulpes_vulpes
ENSRNOG00000014503	Celf4	100	90.831	ENSXETG00000020486	celf4	93	90.831	Xenopus_tropicalis
ENSRNOG00000014503	Celf4	100	76.571	ENSXCOG00000017592	celf4	79	74.571	Xiphophorus_couchianus
ENSRNOG00000014503	Celf4	100	81.714	ENSXMAG00000018178	celf4	87	80.857	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000380	alternative mRNA splicing, via spliceosome	-	IEA	Process
GO:0000380	alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006376	mRNA splice site selection	21873635.	IBA	Process
GO:0006376	mRNA splice site selection	-	ISO	Process
GO:0036002	pre-mRNA binding	-	IEA	Function
GO:0036002	pre-mRNA binding	-	ISO	Function
GO:0048025	negative regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0048026	positive regulation of mRNA splicing, via spliceosome	-	IEA	Process
GO:0048026	positive regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0090394	negative regulation of excitatory postsynaptic potential	-	ISO	Process
GO:1902866	regulation of retina development in camera-type eye	-	ISO	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component