EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014513 (Gene tree)
Gene ID: 309036
Gene Symbol: Rexo5
Alias: 2610020h08rik|Exnef|LOC309036|MGC156803|RGD1305412
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 72135 bases
Position: chr1:189549960-189622094
Accession: 1305412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000019654	RRM_1	PF00076.22	2.2e-13	1	1
ENSRNOP00000073863	RRM_1	PF00076.22	3.2e-13	1	1
ENSRNOP00000019654	RNase_T	PF00929.24	4.6e-05	1	1
ENSRNOP00000073863	RNase_T	PF00929.24	5.9e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000083153	-	2741	XM_006230111	ENSRNOP00000073863	846 (aa)	XP_006230173	A0A0G2K6L8
ENSRNOT00000019654	-	2517	XM_008759755	ENSRNOP00000019654	754 (aa)	XP_008757977	A1A5R7

Gene Model

Click here to download ENSRNOG00000014513's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014513	Rexo5	99	69.525	ENSG00000005189	REXO5	100	82.517	Homo_sapiens
ENSRNOG00000014513	Rexo5	92	32.368	ENSAPOG00000008514	REXO5	91	32.368	Acanthochromis_polyacanthus
ENSRNOG00000014513	Rexo5	99	70.331	ENSAMEG00000006178	REXO5	97	70.331	Ailuropoda_melanoleuca
ENSRNOG00000014513	Rexo5	50	39.737	ENSAOCG00000003481	-	71	40.420	Amphiprion_ocellaris
ENSRNOG00000014513	Rexo5	98	32.817	ENSAPEG00000010627	REXO5	98	32.817	Amphiprion_percula
ENSRNOG00000014513	Rexo5	73	37.435	ENSATEG00000004682	REXO5	98	36.884	Anabas_testudineus
ENSRNOG00000014513	Rexo5	94	45.845	ENSAPLG00000015740	REXO5	99	45.845	Anas_platyrhynchos
ENSRNOG00000014513	Rexo5	95	43.396	ENSACAG00000009744	REXO5	94	43.396	Anolis_carolinensis
ENSRNOG00000014513	Rexo5	98	68.043	ENSANAG00000034379	REXO5	97	68.043	Aotus_nancymaae
ENSRNOG00000014513	Rexo5	77	34.455	ENSACLG00000004778	REXO5	99	34.455	Astatotilapia_calliptera
ENSRNOG00000014513	Rexo5	98	68.449	ENSBTAG00000006449	REXO5	95	68.449	Bos_taurus
ENSRNOG00000014513	Rexo5	99	67.152	ENSCJAG00000009363	REXO5	97	71.010	Callithrix_jacchus
ENSRNOG00000014513	Rexo5	99	69.669	ENSCAFG00000017924	REXO5	99	68.852	Canis_familiaris
ENSRNOG00000014513	Rexo5	99	67.815	ENSCAFG00020021846	REXO5	97	67.815	Canis_lupus_dingo
ENSRNOG00000014513	Rexo5	99	68.218	ENSCHIG00000022443	REXO5	97	68.218	Capra_hircus
ENSRNOG00000014513	Rexo5	99	63.802	ENSCPOG00000008940	REXO5	93	66.058	Cavia_porcellus
ENSRNOG00000014513	Rexo5	98	69.241	ENSCCAG00000034936	REXO5	97	69.241	Cebus_capucinus
ENSRNOG00000014513	Rexo5	98	70.173	ENSCATG00000044063	REXO5	97	70.173	Cercocebus_atys
ENSRNOG00000014513	Rexo5	99	64.981	ENSCLAG00000008033	REXO5	94	64.981	Chinchilla_lanigera
ENSRNOG00000014513	Rexo5	98	70.173	ENSCSAG00000007562	REXO5	97	70.173	Chlorocebus_sabaeus
ENSRNOG00000014513	Rexo5	75	66.234	ENSCHOG00000009146	-	75	66.234	Choloepus_hoffmanni
ENSRNOG00000014513	Rexo5	94	45.040	ENSCPBG00000019062	REXO5	93	45.040	Chrysemys_picta_bellii
ENSRNOG00000014513	Rexo5	98	69.907	ENSCANG00000035776	REXO5	97	69.907	Colobus_angolensis_palliatus
ENSRNOG00000014513	Rexo5	99	80.079	ENSCGRG00001016179	-	99	80.079	Cricetulus_griseus_chok1gshd
ENSRNOG00000014513	Rexo5	99	80.449	ENSCGRG00000010868	-	99	80.449	Cricetulus_griseus_crigri
ENSRNOG00000014513	Rexo5	95	71.369	ENSEASG00005007266	REXO5	98	73.016	Equus_asinus_asinus
ENSRNOG00000014513	Rexo5	99	69.180	ENSECAG00000018769	REXO5	87	69.180	Equus_caballus
ENSRNOG00000014513	Rexo5	86	67.251	ENSEEUG00000003572	REXO5	88	67.251	Erinaceus_europaeus
ENSRNOG00000014513	Rexo5	99	69.272	ENSFCAG00000015160	REXO5	97	69.272	Felis_catus
ENSRNOG00000014513	Rexo5	95	44.744	ENSFALG00000014026	REXO5	99	44.744	Ficedula_albicollis
ENSRNOG00000014513	Rexo5	71	32.795	ENSFHEG00000013388	REXO5	72	32.956	Fundulus_heteroclitus
ENSRNOG00000014513	Rexo5	95	45.273	ENSGALG00000002239	REXO5	95	45.273	Gallus_gallus
ENSRNOG00000014513	Rexo5	71	35.219	ENSGAFG00000011045	REXO5	65	35.219	Gambusia_affinis
ENSRNOG00000014513	Rexo5	51	40.933	ENSGACG00000019507	-	83	40.933	Gasterosteus_aculeatus
ENSRNOG00000014513	Rexo5	99	43.718	ENSGAGG00000008242	REXO5	96	43.718	Gopherus_agassizii
ENSRNOG00000014513	Rexo5	99	69.393	ENSGGOG00000004539	REXO5	98	69.393	Gorilla_gorilla
ENSRNOG00000014513	Rexo5	92	34.153	ENSHBUG00000017976	REXO5	92	34.153	Haplochromis_burtoni
ENSRNOG00000014513	Rexo5	87	65.113	ENSHGLG00000012652	REXO5	99	65.113	Heterocephalus_glaber_female
ENSRNOG00000014513	Rexo5	99	63.827	ENSHGLG00100013255	REXO5	99	67.494	Heterocephalus_glaber_male
ENSRNOG00000014513	Rexo5	63	38.285	ENSHCOG00000008648	REXO5	83	38.669	Hippocampus_comes
ENSRNOG00000014513	Rexo5	85	64.806	ENSSTOG00000007071	REXO5	95	64.806	Ictidomys_tridecemlineatus
ENSRNOG00000014513	Rexo5	99	69.200	ENSJJAG00000023821	-	99	69.200	Jaculus_jaculus
ENSRNOG00000014513	Rexo5	99	30.891	ENSKMAG00000009488	REXO5	99	30.891	Kryptolebias_marmoratus
ENSRNOG00000014513	Rexo5	98	32.306	ENSLBEG00000009276	REXO5	99	32.306	Labrus_bergylta
ENSRNOG00000014513	Rexo5	78	43.636	ENSLACG00000001758	REXO5	100	43.636	Latimeria_chalumnae
ENSRNOG00000014513	Rexo5	99	69.323	ENSLAFG00000006157	REXO5	99	69.323	Loxodonta_africana
ENSRNOG00000014513	Rexo5	98	70.040	ENSMFAG00000036613	REXO5	97	70.040	Macaca_fascicularis
ENSRNOG00000014513	Rexo5	98	69.907	ENSMMUG00000016748	REXO5	97	69.907	Macaca_mulatta
ENSRNOG00000014513	Rexo5	98	70.040	ENSMNEG00000045028	REXO5	97	70.040	Macaca_nemestrina
ENSRNOG00000014513	Rexo5	98	70.173	ENSMLEG00000029851	REXO5	97	70.173	Mandrillus_leucophaeus
ENSRNOG00000014513	Rexo5	96	31.756	ENSMAMG00000006915	REXO5	90	31.760	Mastacembelus_armatus
ENSRNOG00000014513	Rexo5	92	33.743	ENSMZEG00005013657	REXO5	92	33.743	Maylandia_zebra
ENSRNOG00000014513	Rexo5	95	45.576	ENSMGAG00000010369	REXO5	99	45.539	Meleagris_gallopavo
ENSRNOG00000014513	Rexo5	99	69.934	ENSMICG00000014886	REXO5	97	69.934	Microcebus_murinus
ENSRNOG00000014513	Rexo5	59	78.348	ENSMOCG00000010062	-	100	78.348	Microtus_ochrogaster
ENSRNOG00000014513	Rexo5	95	50.393	ENSMODG00000007059	REXO5	90	50.393	Monodelphis_domestica
ENSRNOG00000014513	Rexo5	99	90.716	MGP_CAROLIEiJ_G0030385	-	99	90.716	Mus_caroli
ENSRNOG00000014513	Rexo5	99	89.788	ENSMUSG00000030924	Rexo5	98	91.324	Mus_musculus
ENSRNOG00000014513	Rexo5	99	90.053	MGP_SPRETEiJ_G0031499	-	99	90.053	Mus_spretus
ENSRNOG00000014513	Rexo5	98	70.306	ENSMPUG00000013643	REXO5	97	70.306	Mustela_putorius_furo
ENSRNOG00000014513	Rexo5	95	73.883	ENSNGAG00000002025	-	98	76.027	Nannospalax_galili
ENSRNOG00000014513	Rexo5	73	35.060	ENSNBRG00000006877	REXO5	90	35.484	Neolamprologus_brichardi
ENSRNOG00000014513	Rexo5	98	69.507	ENSNLEG00000012334	REXO5	97	69.507	Nomascus_leucogenys
ENSRNOG00000014513	Rexo5	93	50.629	ENSMEUG00000015298	REXO5	99	50.629	Notamacropus_eugenii
ENSRNOG00000014513	Rexo5	87	60.300	ENSOPRG00000011398	REXO5	86	60.300	Ochotona_princeps
ENSRNOG00000014513	Rexo5	71	39.051	ENSONIG00000000148	REXO5	97	37.478	Oreochromis_niloticus
ENSRNOG00000014513	Rexo5	94	51.701	ENSOANG00000014291	REXO5	100	51.701	Ornithorhynchus_anatinus
ENSRNOG00000014513	Rexo5	98	67.111	ENSOCUG00000009913	REXO5	96	67.111	Oryctolagus_cuniculus
ENSRNOG00000014513	Rexo5	91	32.791	ENSORLG00000009738	REXO5	99	32.242	Oryzias_latipes
ENSRNOG00000014513	Rexo5	91	32.432	ENSORLG00020010270	REXO5	98	31.652	Oryzias_latipes_hni
ENSRNOG00000014513	Rexo5	91	32.027	ENSORLG00015009678	REXO5	96	31.558	Oryzias_latipes_hsok
ENSRNOG00000014513	Rexo5	98	32.193	ENSOMEG00000019491	REXO5	98	32.193	Oryzias_melastigma
ENSRNOG00000014513	Rexo5	99	66.887	ENSOGAG00000011564	REXO5	97	66.887	Otolemur_garnettii
ENSRNOG00000014513	Rexo5	99	68.351	ENSOARG00000013401	REXO5	98	68.133	Ovis_aries
ENSRNOG00000014513	Rexo5	99	69.129	ENSPPAG00000035005	REXO5	98	69.129	Pan_paniscus
ENSRNOG00000014513	Rexo5	99	68.097	ENSPPRG00000022345	REXO5	97	68.097	Panthera_pardus
ENSRNOG00000014513	Rexo5	99	69.007	ENSPTIG00000012096	REXO5	97	69.007	Panthera_tigris_altaica
ENSRNOG00000014513	Rexo5	99	69.129	ENSPTRG00000007851	REXO5	98	69.129	Pan_troglodytes
ENSRNOG00000014513	Rexo5	98	70.040	ENSPANG00000006898	REXO5	97	70.040	Papio_anubis
ENSRNOG00000014513	Rexo5	92	36.791	ENSPKIG00000014406	REXO5	94	36.791	Paramormyrops_kingsleyae
ENSRNOG00000014513	Rexo5	95	43.893	ENSPSIG00000012172	REXO5	94	43.893	Pelodiscus_sinensis
ENSRNOG00000014513	Rexo5	95	51.444	ENSPCIG00000029238	-	95	51.575	Phascolarctos_cinereus
ENSRNOG00000014513	Rexo5	92	30.184	ENSPFOG00000012767	REXO5	92	30.315	Poecilia_formosa
ENSRNOG00000014513	Rexo5	92	30.052	ENSPLAG00000006408	REXO5	92	30.184	Poecilia_latipinna
ENSRNOG00000014513	Rexo5	92	31.102	ENSPMEG00000007726	REXO5	92	31.234	Poecilia_mexicana
ENSRNOG00000014513	Rexo5	91	31.391	ENSPREG00000000146	REXO5	92	31.391	Poecilia_reticulata
ENSRNOG00000014513	Rexo5	98	69.507	ENSPPYG00000007163	REXO5	97	69.507	Pongo_abelii
ENSRNOG00000014513	Rexo5	92	67.664	ENSPCAG00000006265	REXO5	100	67.664	Procavia_capensis
ENSRNOG00000014513	Rexo5	99	69.536	ENSPCOG00000018775	REXO5	97	69.536	Propithecus_coquereli
ENSRNOG00000014513	Rexo5	95	69.890	ENSPVAG00000003293	REXO5	99	69.890	Pteropus_vampyrus
ENSRNOG00000014513	Rexo5	78	36.256	ENSPNYG00000006922	REXO5	91	35.355	Pundamilia_nyererei
ENSRNOG00000014513	Rexo5	91	33.240	ENSPNAG00000018866	-	91	32.548	Pygocentrus_nattereri
ENSRNOG00000014513	Rexo5	98	69.907	ENSRBIG00000035163	REXO5	86	69.907	Rhinopithecus_bieti
ENSRNOG00000014513	Rexo5	98	70.040	ENSRROG00000034741	REXO5	97	70.040	Rhinopithecus_roxellana
ENSRNOG00000014513	Rexo5	99	69.444	ENSSBOG00000029650	REXO5	99	69.120	Saimiri_boliviensis_boliviensis
ENSRNOG00000014513	Rexo5	99	51.675	ENSSHAG00000005042	REXO5	98	51.675	Sarcophilus_harrisii
ENSRNOG00000014513	Rexo5	92	37.917	ENSSFOG00015007581	REXO5	92	37.917	Scleropages_formosus
ENSRNOG00000014513	Rexo5	93	32.418	ENSSMAG00000000709	REXO5	92	32.675	Scophthalmus_maximus
ENSRNOG00000014513	Rexo5	92	31.848	ENSSDUG00000014528	REXO5	94	32.066	Seriola_dumerili
ENSRNOG00000014513	Rexo5	91	32.016	ENSSLDG00000007641	REXO5	90	31.794	Seriola_lalandi_dorsalis
ENSRNOG00000014513	Rexo5	99	68.482	ENSSSCG00000007855	REXO5	99	68.758	Sus_scrofa
ENSRNOG00000014513	Rexo5	95	45.676	ENSTGUG00000009219	REXO5	99	45.676	Taeniopygia_guttata
ENSRNOG00000014513	Rexo5	93	33.068	ENSTRUG00000015295	-	91	33.068	Takifugu_rubripes
ENSRNOG00000014513	Rexo5	84	64.706	ENSTBEG00000008797	REXO5	88	64.706	Tupaia_belangeri
ENSRNOG00000014513	Rexo5	99	67.503	ENSTTRG00000016439	REXO5	98	67.503	Tursiops_truncatus
ENSRNOG00000014513	Rexo5	87	68.437	ENSUAMG00000017756	REXO5	99	68.437	Ursus_americanus
ENSRNOG00000014513	Rexo5	99	65.828	ENSVPAG00000003459	REXO5	97	65.828	Vicugna_pacos
ENSRNOG00000014513	Rexo5	99	69.669	ENSVVUG00000023257	REXO5	97	69.669	Vulpes_vulpes
ENSRNOG00000014513	Rexo5	94	42.817	ENSXETG00000016735	rexo5	98	42.817	Xenopus_tropicalis
ENSRNOG00000014513	Rexo5	73	30.938	ENSXCOG00000015997	REXO5	73	30.938	Xiphophorus_couchianus
ENSRNOG00000014513	Rexo5	79	33.549	ENSXMAG00000014770	REXO5	75	33.549	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004527	exonuclease activity	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process