EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014531 (Gene tree)
Gene ID: 293408
Gene Symbol: Hbs1l
Alias: LOC293408
Full Name: HBS1-like translational GTPase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 77050 bases
Position: chr1:16819170-16896219
Accession: 1308509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000019734	GTP_EFTU	PF00009.27	3.8e-47	1	1
ENSRNOP00000072325	GTP_EFTU	PF00009.27	3.8e-47	1	1
ENSRNOP00000019734	GTP_EFTU_D3	PF03143.17	4.7e-31	1	1
ENSRNOP00000072325	GTP_EFTU_D3	PF03143.17	4.7e-31	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000019734	-	2688	XM_017588984	ENSRNOP00000019734	679 (aa)	XP_017444473	Q6AXM7
ENSRNOT00000086756	-	2040	-	ENSRNOP00000072325	679 (aa)	-	A0A0G2K2P6

Gene Model

Click here to download ENSRNOG00000014531's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03015	mRNA surveillance pathway	KEGG
rno05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000014531	Hbs1l	63	42.056	ENSRNOG00000048817	Gspt2	67	42.056
ENSRNOG00000014531	Hbs1l	63	42.290	ENSRNOG00000046271	LOC100911685	67	42.290
ENSRNOG00000014531	Hbs1l	63	39.359	ENSRNOG00000051885	LOC100360413	95	39.359
ENSRNOG00000014531	Hbs1l	63	39.359	ENSRNOG00000056855	LOC100911991	95	39.359
ENSRNOG00000014531	Hbs1l	63	38.864	ENSRNOG00000012477	Eef1a2	95	38.864
ENSRNOG00000014531	Hbs1l	63	39.588	ENSRNOG00000009439	Eef1a1	95	39.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014531	Hbs1l	100	88.484	ENSG00000112339	HBS1L	100	91.379	Homo_sapiens
ENSRNOG00000014531	Hbs1l	80	86.059	ENSAPOG00000013169	hbs1l	90	86.104	Acanthochromis_polyacanthus
ENSRNOG00000014531	Hbs1l	99	88.467	ENSAMEG00000009749	HBS1L	99	88.467	Ailuropoda_melanoleuca
ENSRNOG00000014531	Hbs1l	78	78.947	ENSACIG00000017087	hbs1l	89	78.947	Amphilophus_citrinellus
ENSRNOG00000014531	Hbs1l	100	71.977	ENSAPEG00000008320	hbs1l	100	72.199	Amphiprion_percula
ENSRNOG00000014531	Hbs1l	100	71.127	ENSATEG00000004459	hbs1l	100	71.489	Anabas_testudineus
ENSRNOG00000014531	Hbs1l	98	78.056	ENSAPLG00000007791	HBS1L	100	78.792	Anas_platyrhynchos
ENSRNOG00000014531	Hbs1l	100	79.536	ENSACAG00000010120	HBS1L	100	79.536	Anolis_carolinensis
ENSRNOG00000014531	Hbs1l	100	88.047	ENSANAG00000038076	HBS1L	100	88.047	Aotus_nancymaae
ENSRNOG00000014531	Hbs1l	100	72.458	ENSACLG00000010469	hbs1l	100	72.458	Astatotilapia_calliptera
ENSRNOG00000014531	Hbs1l	100	71.593	ENSAMXG00000004260	hbs1l	96	79.057	Astyanax_mexicanus
ENSRNOG00000014531	Hbs1l	100	87.482	ENSBTAG00000020174	HBS1L	100	87.482	Bos_taurus
ENSRNOG00000014531	Hbs1l	70	45.600	WBGene00010622	K07A12.4	83	45.600	Caenorhabditis_elegans
ENSRNOG00000014531	Hbs1l	100	88.921	ENSCJAG00000007678	HBS1L	100	88.921	Callithrix_jacchus
ENSRNOG00000014531	Hbs1l	100	87.045	ENSCAFG00000000226	HBS1L	100	87.045	Canis_familiaris
ENSRNOG00000014531	Hbs1l	100	87.045	ENSCAFG00020021904	HBS1L	100	87.045	Canis_lupus_dingo
ENSRNOG00000014531	Hbs1l	100	86.754	ENSCHIG00000010299	HBS1L	100	86.754	Capra_hircus
ENSRNOG00000014531	Hbs1l	100	86.861	ENSTSYG00000007089	HBS1L	100	86.861	Carlito_syrichta
ENSRNOG00000014531	Hbs1l	99	75.624	ENSCPOG00000007015	HBS1L	99	75.735	Cavia_porcellus
ENSRNOG00000014531	Hbs1l	100	87.318	ENSCCAG00000033863	HBS1L	99	89.908	Cebus_capucinus
ENSRNOG00000014531	Hbs1l	100	87.645	ENSCATG00000043042	HBS1L	100	87.645	Cercocebus_atys
ENSRNOG00000014531	Hbs1l	100	86.317	ENSCLAG00000004937	HBS1L	100	86.317	Chinchilla_lanigera
ENSRNOG00000014531	Hbs1l	100	87.373	ENSCSAG00000016791	HBS1L	100	87.373	Chlorocebus_sabaeus
ENSRNOG00000014531	Hbs1l	97	70.315	ENSCHOG00000001852	HBS1L	99	70.315	Choloepus_hoffmanni
ENSRNOG00000014531	Hbs1l	100	80.842	ENSCPBG00000017635	HBS1L	100	80.842	Chrysemys_picta_bellii
ENSRNOG00000014531	Hbs1l	99	46.814	ENSCING00000005592	-	99	47.361	Ciona_intestinalis
ENSRNOG00000014531	Hbs1l	91	60.573	ENSCSAVG00000002297	-	99	60.741	Ciona_savignyi
ENSRNOG00000014531	Hbs1l	100	87.064	ENSCANG00000031208	HBS1L	100	87.064	Colobus_angolensis_palliatus
ENSRNOG00000014531	Hbs1l	100	92.962	ENSCGRG00001024531	Hbs1l	100	92.962	Cricetulus_griseus_chok1gshd
ENSRNOG00000014531	Hbs1l	100	92.962	ENSCGRG00000017361	Hbs1l	100	92.962	Cricetulus_griseus_crigri
ENSRNOG00000014531	Hbs1l	99	72.287	ENSCSEG00000002794	hbs1l	94	72.287	Cynoglossus_semilaevis
ENSRNOG00000014531	Hbs1l	100	72.073	ENSCVAG00000001462	hbs1l	100	71.853	Cyprinodon_variegatus
ENSRNOG00000014531	Hbs1l	100	71.511	ENSDARG00000036778	hbs1l	100	72.086	Danio_rerio
ENSRNOG00000014531	Hbs1l	100	88.710	ENSDORG00000005958	Hbs1l	100	88.710	Dipodomys_ordii
ENSRNOG00000014531	Hbs1l	99	46.901	FBgn0042712	HBS1	100	46.901	Drosophila_melanogaster
ENSRNOG00000014531	Hbs1l	100	81.487	ENSETEG00000000913	HBS1L	100	81.487	Echinops_telfairi
ENSRNOG00000014531	Hbs1l	99	60.850	ENSEBUG00000010759	hbs1l	100	64.992	Eptatretus_burgeri
ENSRNOG00000014531	Hbs1l	100	86.483	ENSEASG00005011148	HBS1L	100	86.628	Equus_asinus_asinus
ENSRNOG00000014531	Hbs1l	100	86.337	ENSECAG00000004470	HBS1L	100	86.337	Equus_caballus
ENSRNOG00000014531	Hbs1l	100	83.480	ENSEEUG00000013582	HBS1L	100	83.480	Erinaceus_europaeus
ENSRNOG00000014531	Hbs1l	97	58.195	ENSELUG00000006444	hbs1l	95	61.958	Esox_lucius
ENSRNOG00000014531	Hbs1l	100	88.646	ENSFCAG00000001810	HBS1L	100	91.188	Felis_catus
ENSRNOG00000014531	Hbs1l	88	80.801	ENSFALG00000011898	HBS1L	100	80.801	Ficedula_albicollis
ENSRNOG00000014531	Hbs1l	100	86.026	ENSFDAG00000011841	HBS1L	100	86.026	Fukomys_damarensis
ENSRNOG00000014531	Hbs1l	100	70.752	ENSFHEG00000006942	hbs1l	100	70.891	Fundulus_heteroclitus
ENSRNOG00000014531	Hbs1l	99	71.780	ENSGMOG00000011843	hbs1l	100	71.965	Gadus_morhua
ENSRNOG00000014531	Hbs1l	100	80.000	ENSGALG00000013962	HBS1L	100	80.000	Gallus_gallus
ENSRNOG00000014531	Hbs1l	100	72.277	ENSGAFG00000004157	hbs1l	100	72.419	Gambusia_affinis
ENSRNOG00000014531	Hbs1l	99	71.326	ENSGACG00000011035	hbs1l	100	71.614	Gasterosteus_aculeatus
ENSRNOG00000014531	Hbs1l	100	80.290	ENSGAGG00000002033	HBS1L	100	80.290	Gopherus_agassizii
ENSRNOG00000014531	Hbs1l	80	86.055	ENSGGOG00000034956	-	93	95.161	Gorilla_gorilla
ENSRNOG00000014531	Hbs1l	100	72.599	ENSHBUG00000013424	hbs1l	100	72.599	Haplochromis_burtoni
ENSRNOG00000014531	Hbs1l	100	86.006	ENSHGLG00000000516	HBS1L	100	86.006	Heterocephalus_glaber_female
ENSRNOG00000014531	Hbs1l	100	86.006	ENSHGLG00100003550	HBS1L	100	86.006	Heterocephalus_glaber_male
ENSRNOG00000014531	Hbs1l	100	70.638	ENSHCOG00000007581	hbs1l	94	69.714	Hippocampus_comes
ENSRNOG00000014531	Hbs1l	100	71.346	ENSIPUG00000010748	hbs1l	100	71.884	Ictalurus_punctatus
ENSRNOG00000014531	Hbs1l	100	89.374	ENSSTOG00000007551	HBS1L	100	89.374	Ictidomys_tridecemlineatus
ENSRNOG00000014531	Hbs1l	100	70.381	ENSJJAG00000012660	-	100	71.114	Jaculus_jaculus
ENSRNOG00000014531	Hbs1l	99	85.882	ENSJJAG00000017024	-	97	85.882	Jaculus_jaculus
ENSRNOG00000014531	Hbs1l	85	86.957	ENSKMAG00000012130	hbs1l	100	72.073	Kryptolebias_marmoratus
ENSRNOG00000014531	Hbs1l	100	72.136	ENSLBEG00000002784	hbs1l	99	79.849	Labrus_bergylta
ENSRNOG00000014531	Hbs1l	71	80.290	ENSLACG00000004528	HBS1L	96	80.252	Latimeria_chalumnae
ENSRNOG00000014531	Hbs1l	100	71.748	ENSLOCG00000016221	hbs1l	100	72.191	Lepisosteus_oculatus
ENSRNOG00000014531	Hbs1l	100	85.029	ENSLAFG00000007835	HBS1L	100	85.294	Loxodonta_africana
ENSRNOG00000014531	Hbs1l	100	87.645	ENSMFAG00000003766	HBS1L	100	89.725	Macaca_fascicularis
ENSRNOG00000014531	Hbs1l	91	89.725	ENSMMUG00000004802	HBS1L	100	89.725	Macaca_mulatta
ENSRNOG00000014531	Hbs1l	100	87.645	ENSMNEG00000043942	HBS1L	100	89.725	Macaca_nemestrina
ENSRNOG00000014531	Hbs1l	99	87.701	ENSMLEG00000043218	HBS1L	97	89.668	Mandrillus_leucophaeus
ENSRNOG00000014531	Hbs1l	100	71.027	ENSMAMG00000016498	hbs1l	100	70.886	Mastacembelus_armatus
ENSRNOG00000014531	Hbs1l	78	79.323	ENSMZEG00005024018	-	88	79.323	Maylandia_zebra
ENSRNOG00000014531	Hbs1l	100	72.458	ENSMZEG00005015575	hbs1l	100	72.458	Maylandia_zebra
ENSRNOG00000014531	Hbs1l	99	78.686	ENSMGAG00000013065	HBS1L	99	78.686	Meleagris_gallopavo
ENSRNOG00000014531	Hbs1l	100	92.815	ENSMAUG00000001077	Hbs1l	100	92.815	Mesocricetus_auratus
ENSRNOG00000014531	Hbs1l	99	83.088	ENSMICG00000001533	-	99	88.745	Microcebus_murinus
ENSRNOG00000014531	Hbs1l	100	76.128	ENSMICG00000030043	-	96	94.086	Microcebus_murinus
ENSRNOG00000014531	Hbs1l	100	92.375	ENSMOCG00000023038	Hbs1l	100	92.375	Microtus_ochrogaster
ENSRNOG00000014531	Hbs1l	97	71.579	ENSMMOG00000015507	hbs1l	99	72.398	Mola_mola
ENSRNOG00000014531	Hbs1l	100	83.623	ENSMODG00000017499	HBS1L	100	83.623	Monodelphis_domestica
ENSRNOG00000014531	Hbs1l	100	70.745	ENSMALG00000010768	hbs1l	100	70.745	Monopterus_albus
ENSRNOG00000014531	Hbs1l	100	96.334	MGP_CAROLIEiJ_G0015162	Hbs1l	100	96.334	Mus_caroli
ENSRNOG00000014531	Hbs1l	100	96.760	ENSMUSG00000019977	Hbs1l	100	100.000	Mus_musculus
ENSRNOG00000014531	Hbs1l	100	95.455	MGP_PahariEiJ_G0023782	Hbs1l	100	95.455	Mus_pahari
ENSRNOG00000014531	Hbs1l	100	96.481	MGP_SPRETEiJ_G0015970	Hbs1l	100	96.481	Mus_spretus
ENSRNOG00000014531	Hbs1l	100	88.081	ENSMPUG00000014810	HBS1L	100	88.081	Mustela_putorius_furo
ENSRNOG00000014531	Hbs1l	100	89.343	ENSMLUG00000010618	HBS1L	100	89.343	Myotis_lucifugus
ENSRNOG00000014531	Hbs1l	100	89.443	ENSNGAG00000015184	Hbs1l	100	89.443	Nannospalax_galili
ENSRNOG00000014531	Hbs1l	100	72.458	ENSNBRG00000020095	hbs1l	98	79.511	Neolamprologus_brichardi
ENSRNOG00000014531	Hbs1l	100	87.627	ENSNLEG00000014721	HBS1L	99	89.503	Nomascus_leucogenys
ENSRNOG00000014531	Hbs1l	81	92.893	ENSMEUG00000003907	HBS1L	81	92.708	Notamacropus_eugenii
ENSRNOG00000014531	Hbs1l	77	93.388	ENSOPRG00000013595	HBS1L	76	93.388	Ochotona_princeps
ENSRNOG00000014531	Hbs1l	99	87.187	ENSODEG00000008959	HBS1L	99	87.187	Octodon_degus
ENSRNOG00000014531	Hbs1l	100	72.881	ENSONIG00000000460	hbs1l	100	72.612	Oreochromis_niloticus
ENSRNOG00000014531	Hbs1l	99	81.858	ENSOANG00000002684	-	99	81.858	Ornithorhynchus_anatinus
ENSRNOG00000014531	Hbs1l	100	83.115	ENSOCUG00000011619	HBS1L	99	85.762	Oryctolagus_cuniculus
ENSRNOG00000014531	Hbs1l	100	70.297	ENSORLG00000016559	hbs1l	100	70.198	Oryzias_latipes
ENSRNOG00000014531	Hbs1l	100	70.000	ENSORLG00020003827	hbs1l	100	70.621	Oryzias_latipes_hni
ENSRNOG00000014531	Hbs1l	100	70.000	ENSORLG00015023105	hbs1l	100	70.621	Oryzias_latipes_hsok
ENSRNOG00000014531	Hbs1l	100	70.547	ENSOMEG00000016715	hbs1l	100	71.308	Oryzias_melastigma
ENSRNOG00000014531	Hbs1l	100	88.338	ENSOGAG00000012604	HBS1L	100	88.338	Otolemur_garnettii
ENSRNOG00000014531	Hbs1l	100	86.754	ENSOARG00000005671	-	100	86.754	Ovis_aries
ENSRNOG00000014531	Hbs1l	99	87.153	ENSOARG00000014798	-	99	87.153	Ovis_aries
ENSRNOG00000014531	Hbs1l	100	88.776	ENSPPAG00000029900	HBS1L	100	88.776	Pan_paniscus
ENSRNOG00000014531	Hbs1l	100	88.501	ENSPPRG00000005285	HBS1L	100	88.501	Panthera_pardus
ENSRNOG00000014531	Hbs1l	100	88.355	ENSPTIG00000015803	HBS1L	100	88.355	Panthera_tigris_altaica
ENSRNOG00000014531	Hbs1l	100	88.776	ENSPTRG00000018630	HBS1L	100	88.776	Pan_troglodytes
ENSRNOG00000014531	Hbs1l	100	87.500	ENSPANG00000007075	HBS1L	100	87.500	Papio_anubis
ENSRNOG00000014531	Hbs1l	100	71.491	ENSPKIG00000023171	hbs1l	97	77.528	Paramormyrops_kingsleyae
ENSRNOG00000014531	Hbs1l	86	77.815	ENSPSIG00000016467	HBS1L	97	77.983	Pelodiscus_sinensis
ENSRNOG00000014531	Hbs1l	99	73.314	ENSPMGG00000018051	hbs1l	96	85.106	Periophthalmus_magnuspinnatus
ENSRNOG00000014531	Hbs1l	100	92.962	ENSPEMG00000014369	Hbs1l	100	92.962	Peromyscus_maniculatus_bairdii
ENSRNOG00000014531	Hbs1l	100	65.498	ENSPMAG00000002516	hbs1l	100	65.498	Petromyzon_marinus
ENSRNOG00000014531	Hbs1l	100	70.663	ENSPFOG00000021764	hbs1l	100	71.368	Poecilia_formosa
ENSRNOG00000014531	Hbs1l	100	71.004	ENSPLAG00000006193	hbs1l	100	71.711	Poecilia_latipinna
ENSRNOG00000014531	Hbs1l	100	71.570	ENSPMEG00000000925	hbs1l	100	71.711	Poecilia_mexicana
ENSRNOG00000014531	Hbs1l	100	71.711	ENSPREG00000011270	hbs1l	100	71.711	Poecilia_reticulata
ENSRNOG00000014531	Hbs1l	100	87.901	ENSPPYG00000017027	HBS1L	100	87.901	Pongo_abelii
ENSRNOG00000014531	Hbs1l	90	89.154	ENSPCAG00000007002	HBS1L	90	89.154	Procavia_capensis
ENSRNOG00000014531	Hbs1l	86	87.879	ENSPVAG00000015229	HBS1L	90	87.918	Pteropus_vampyrus
ENSRNOG00000014531	Hbs1l	100	72.458	ENSPNYG00000013360	hbs1l	100	72.458	Pundamilia_nyererei
ENSRNOG00000014531	Hbs1l	100	72.206	ENSPNAG00000026721	hbs1l	100	73.066	Pygocentrus_nattereri
ENSRNOG00000014531	Hbs1l	100	87.645	ENSRBIG00000004484	HBS1L	100	87.645	Rhinopithecus_bieti
ENSRNOG00000014531	Hbs1l	100	87.500	ENSRROG00000026176	HBS1L	100	87.500	Rhinopithecus_roxellana
ENSRNOG00000014531	Hbs1l	62	38.202	YKR084C	-	73	38.202	Saccharomyces_cerevisiae
ENSRNOG00000014531	Hbs1l	100	79.446	ENSSBOG00000016930	-	98	87.766	Saimiri_boliviensis_boliviensis
ENSRNOG00000014531	Hbs1l	100	88.338	ENSSBOG00000019696	-	100	88.338	Saimiri_boliviensis_boliviensis
ENSRNOG00000014531	Hbs1l	100	85.029	ENSSHAG00000013509	HBS1L	100	85.029	Sarcophilus_harrisii
ENSRNOG00000014531	Hbs1l	99	69.928	ENSSFOG00015017544	hbs1l	96	70.360	Scleropages_formosus
ENSRNOG00000014531	Hbs1l	100	71.388	ENSSMAG00000010621	hbs1l	100	71.186	Scophthalmus_maximus
ENSRNOG00000014531	Hbs1l	100	70.266	ENSSDUG00000012974	hbs1l	100	70.968	Seriola_dumerili
ENSRNOG00000014531	Hbs1l	100	70.126	ENSSLDG00000004960	hbs1l	98	78.358	Seriola_lalandi_dorsalis
ENSRNOG00000014531	Hbs1l	98	87.145	ENSSARG00000006747	HBS1L	100	87.145	Sorex_araneus
ENSRNOG00000014531	Hbs1l	99	78.551	ENSSPUG00000012389	HBS1L	99	78.551	Sphenodon_punctatus
ENSRNOG00000014531	Hbs1l	97	87.838	ENSSSCG00000004169	HBS1L	99	87.838	Sus_scrofa
ENSRNOG00000014531	Hbs1l	99	78.955	ENSTGUG00000011507	HBS1L	99	78.955	Taeniopygia_guttata
ENSRNOG00000014531	Hbs1l	99	71.203	ENSTRUG00000016128	hbs1l	89	86.486	Takifugu_rubripes
ENSRNOG00000014531	Hbs1l	99	73.004	ENSTNIG00000016320	hbs1l	99	73.730	Tetraodon_nigroviridis
ENSRNOG00000014531	Hbs1l	100	78.717	ENSTBEG00000009950	HBS1L	100	78.717	Tupaia_belangeri
ENSRNOG00000014531	Hbs1l	99	87.026	ENSTTRG00000003715	HBS1L	99	87.026	Tursiops_truncatus
ENSRNOG00000014531	Hbs1l	100	88.792	ENSUAMG00000001064	HBS1L	100	88.792	Ursus_americanus
ENSRNOG00000014531	Hbs1l	100	88.646	ENSUMAG00000024395	HBS1L	99	97.297	Ursus_maritimus
ENSRNOG00000014531	Hbs1l	90	89.777	ENSVPAG00000006280	HBS1L	90	89.777	Vicugna_pacos
ENSRNOG00000014531	Hbs1l	100	87.191	ENSVVUG00000000295	HBS1L	100	87.191	Vulpes_vulpes
ENSRNOG00000014531	Hbs1l	100	72.688	ENSXETG00000003726	hbs1l	100	73.266	Xenopus_tropicalis
ENSRNOG00000014531	Hbs1l	99	74.090	ENSXCOG00000005323	hbs1l	100	74.236	Xiphophorus_couchianus
ENSRNOG00000014531	Hbs1l	100	72.419	ENSXMAG00000004359	hbs1l	100	72.560	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003746	translation elongation factor activity	-	IEA	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0006414	translational elongation	-	IEA	Process
GO:0008150	biological_process	-	ND	Process