EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014588 (Gene tree)
Gene ID: 681234
Gene Symbol: Dbr1
Alias: LOC315950|LOC681234
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 11916 bases
Position: chr8:107826424-107838339
Accession: 1598038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000019769	DBR1	PF05011.13	9.3e-34	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000019769	-	2347	-	ENSRNOP00000019769	545 (aa)	-	B2RYJ2

Gene Model

Click here to download ENSRNOG00000014588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014588	Dbr1	98	85.206	ENSG00000138231	DBR1	94	96.396	Homo_sapiens
ENSRNOG00000014588	Dbr1	99	56.216	ENSAPOG00000004318	dbr1	99	56.396	Acanthochromis_polyacanthus
ENSRNOG00000014588	Dbr1	97	85.714	ENSAMEG00000006272	DBR1	99	85.741	Ailuropoda_melanoleuca
ENSRNOG00000014588	Dbr1	99	54.659	ENSACIG00000020512	dbr1	99	54.529	Amphilophus_citrinellus
ENSRNOG00000014588	Dbr1	99	55.197	ENSAOCG00000008060	dbr1	99	55.376	Amphiprion_ocellaris
ENSRNOG00000014588	Dbr1	99	55.914	ENSAPEG00000021944	dbr1	99	56.093	Amphiprion_percula
ENSRNOG00000014588	Dbr1	99	57.092	ENSATEG00000019673	dbr1	100	57.092	Anabas_testudineus
ENSRNOG00000014588	Dbr1	99	64.899	ENSACAG00000016760	DBR1	99	65.082	Anolis_carolinensis
ENSRNOG00000014588	Dbr1	97	84.369	ENSANAG00000028952	DBR1	99	84.473	Aotus_nancymaae
ENSRNOG00000014588	Dbr1	99	54.930	ENSACLG00000024027	dbr1	99	55.458	Astatotilapia_calliptera
ENSRNOG00000014588	Dbr1	99	52.821	ENSAMXG00000030736	dbr1	99	52.821	Astyanax_mexicanus
ENSRNOG00000014588	Dbr1	99	84.899	ENSBTAG00000019949	DBR1	99	84.899	Bos_taurus
ENSRNOG00000014588	Dbr1	72	43.489	WBGene00000937	dbr-1	80	43.489	Caenorhabditis_elegans
ENSRNOG00000014588	Dbr1	98	84.270	ENSCJAG00000002433	DBR1	99	84.007	Callithrix_jacchus
ENSRNOG00000014588	Dbr1	98	85.421	ENSCAFG00000007501	DBR1	99	85.451	Canis_familiaris
ENSRNOG00000014588	Dbr1	98	85.421	ENSCAFG00020008060	DBR1	99	85.451	Canis_lupus_dingo
ENSRNOG00000014588	Dbr1	99	84.346	ENSCHIG00000026937	DBR1	99	84.346	Capra_hircus
ENSRNOG00000014588	Dbr1	99	81.651	ENSTSYG00000005317	DBR1	99	81.835	Carlito_syrichta
ENSRNOG00000014588	Dbr1	98	81.648	ENSCPOG00000006179	DBR1	99	81.516	Cavia_porcellus
ENSRNOG00000014588	Dbr1	98	84.457	ENSCCAG00000025708	DBR1	99	84.502	Cebus_capucinus
ENSRNOG00000014588	Dbr1	97	85.714	ENSCATG00000032054	DBR1	99	85.793	Cercocebus_atys
ENSRNOG00000014588	Dbr1	98	84.457	ENSCLAG00000001800	DBR1	99	84.288	Chinchilla_lanigera
ENSRNOG00000014588	Dbr1	97	85.338	ENSCSAG00000010977	DBR1	99	85.424	Chlorocebus_sabaeus
ENSRNOG00000014588	Dbr1	89	96.078	ENSCHOG00000000730	DBR1	89	96.078	Choloepus_hoffmanni
ENSRNOG00000014588	Dbr1	99	71.271	ENSCPBG00000007633	DBR1	90	71.087	Chrysemys_picta_bellii
ENSRNOG00000014588	Dbr1	80	52.727	ENSCING00000011388	-	98	53.118	Ciona_intestinalis
ENSRNOG00000014588	Dbr1	69	56.728	ENSCSAVG00000007545	-	100	56.728	Ciona_savignyi
ENSRNOG00000014588	Dbr1	99	85.289	ENSCANG00000024237	DBR1	99	85.213	Colobus_angolensis_palliatus
ENSRNOG00000014588	Dbr1	100	91.971	ENSCGRG00001018497	Dbr1	100	92.153	Cricetulus_griseus_chok1gshd
ENSRNOG00000014588	Dbr1	99	85.923	ENSCGRG00000005958	Dbr1	100	86.106	Cricetulus_griseus_crigri
ENSRNOG00000014588	Dbr1	99	53.393	ENSCSEG00000002813	dbr1	99	52.837	Cynoglossus_semilaevis
ENSRNOG00000014588	Dbr1	99	54.577	ENSCVAG00000019969	dbr1	100	54.561	Cyprinodon_variegatus
ENSRNOG00000014588	Dbr1	99	53.448	ENSDARG00000056923	dbr1	99	54.466	Danio_rerio
ENSRNOG00000014588	Dbr1	98	83.364	ENSDNOG00000043630	DBR1	99	83.210	Dasypus_novemcinctus
ENSRNOG00000014588	Dbr1	69	50.948	FBgn0035838	ldbr	100	42.808	Drosophila_melanogaster
ENSRNOG00000014588	Dbr1	78	98.507	ENSETEG00000011830	DBR1	81	98.507	Echinops_telfairi
ENSRNOG00000014588	Dbr1	99	46.864	ENSEBUG00000007494	dbr1	99	47.387	Eptatretus_burgeri
ENSRNOG00000014588	Dbr1	98	85.794	ENSEASG00005003788	DBR1	99	85.820	Equus_asinus_asinus
ENSRNOG00000014588	Dbr1	98	85.981	ENSECAG00000013920	DBR1	99	86.004	Equus_caballus
ENSRNOG00000014588	Dbr1	99	75.000	ENSEEUG00000007059	DBR1	99	75.551	Erinaceus_europaeus
ENSRNOG00000014588	Dbr1	99	51.742	ENSELUG00000005587	dbr1	99	55.714	Esox_lucius
ENSRNOG00000014588	Dbr1	98	87.103	ENSFCAG00000002229	DBR1	99	87.109	Felis_catus
ENSRNOG00000014588	Dbr1	99	69.653	ENSFALG00000013467	DBR1	86	70.018	Ficedula_albicollis
ENSRNOG00000014588	Dbr1	98	84.270	ENSFDAG00000009524	DBR1	99	84.104	Fukomys_damarensis
ENSRNOG00000014588	Dbr1	99	54.947	ENSFHEG00000001743	dbr1	99	54.690	Fundulus_heteroclitus
ENSRNOG00000014588	Dbr1	99	54.348	ENSGMOG00000006925	dbr1	99	54.348	Gadus_morhua
ENSRNOG00000014588	Dbr1	99	61.510	ENSGALG00000043797	DBR1	99	61.694	Gallus_gallus
ENSRNOG00000014588	Dbr1	99	55.393	ENSGAFG00000001046	dbr1	99	55.576	Gambusia_affinis
ENSRNOG00000014588	Dbr1	99	54.219	ENSGACG00000009122	dbr1	99	54.626	Gasterosteus_aculeatus
ENSRNOG00000014588	Dbr1	99	70.480	ENSGAGG00000001244	DBR1	100	70.295	Gopherus_agassizii
ENSRNOG00000014588	Dbr1	98	80.187	ENSGGOG00000004564	DBR1	99	80.258	Gorilla_gorilla
ENSRNOG00000014588	Dbr1	99	54.930	ENSHBUG00000000882	dbr1	99	55.458	Haplochromis_burtoni
ENSRNOG00000014588	Dbr1	98	85.019	ENSHGLG00000014529	Dbr1	99	84.843	Heterocephalus_glaber_female
ENSRNOG00000014588	Dbr1	98	85.019	ENSHGLG00100013202	Dbr1	99	84.843	Heterocephalus_glaber_male
ENSRNOG00000014588	Dbr1	99	54.286	ENSHCOG00000004179	dbr1	99	54.464	Hippocampus_comes
ENSRNOG00000014588	Dbr1	99	54.087	ENSIPUG00000023749	dbr1	100	54.498	Ictalurus_punctatus
ENSRNOG00000014588	Dbr1	99	85.130	ENSSTOG00000007122	DBR1	99	85.424	Ictidomys_tridecemlineatus
ENSRNOG00000014588	Dbr1	99	86.029	ENSJJAG00000017080	Dbr1	99	86.029	Jaculus_jaculus
ENSRNOG00000014588	Dbr1	99	52.575	ENSKMAG00000004869	dbr1	100	52.973	Kryptolebias_marmoratus
ENSRNOG00000014588	Dbr1	99	54.657	ENSLBEG00000021307	dbr1	100	55.363	Labrus_bergylta
ENSRNOG00000014588	Dbr1	99	67.276	ENSLACG00000005547	DBR1	99	67.276	Latimeria_chalumnae
ENSRNOG00000014588	Dbr1	78	66.667	ENSLOCG00000004160	dbr1	99	57.961	Lepisosteus_oculatus
ENSRNOG00000014588	Dbr1	99	84.899	ENSLAFG00000005827	DBR1	99	84.715	Loxodonta_africana
ENSRNOG00000014588	Dbr1	97	85.902	ENSMFAG00000043642	DBR1	99	85.978	Macaca_fascicularis
ENSRNOG00000014588	Dbr1	97	85.714	ENSMMUG00000021284	DBR1	99	85.793	Macaca_mulatta
ENSRNOG00000014588	Dbr1	97	85.902	ENSMNEG00000041740	DBR1	99	85.978	Macaca_nemestrina
ENSRNOG00000014588	Dbr1	93	67.717	ENSMLEG00000034542	DBR1	95	71.074	Mandrillus_leucophaeus
ENSRNOG00000014588	Dbr1	99	55.009	ENSMAMG00000012205	dbr1	99	54.878	Mastacembelus_armatus
ENSRNOG00000014588	Dbr1	99	54.930	ENSMZEG00005021338	dbr1	99	55.458	Maylandia_zebra
ENSRNOG00000014588	Dbr1	80	65.826	ENSMGAG00000002142	DBR1	99	66.055	Meleagris_gallopavo
ENSRNOG00000014588	Dbr1	100	91.941	ENSMAUG00000010037	Dbr1	100	91.941	Mesocricetus_auratus
ENSRNOG00000014588	Dbr1	98	85.794	ENSMICG00000049533	DBR1	99	85.793	Microcebus_murinus
ENSRNOG00000014588	Dbr1	100	89.358	ENSMOCG00000018746	Dbr1	100	89.358	Microtus_ochrogaster
ENSRNOG00000014588	Dbr1	99	54.594	ENSMMOG00000000719	dbr1	100	54.833	Mola_mola
ENSRNOG00000014588	Dbr1	99	73.260	ENSMODG00000018554	DBR1	99	73.260	Monodelphis_domestica
ENSRNOG00000014588	Dbr1	99	54.545	ENSMALG00000022283	dbr1	97	55.575	Monopterus_albus
ENSRNOG00000014588	Dbr1	98	92.007	MGP_CAROLIEiJ_G0032564	Dbr1	100	99.387	Mus_caroli
ENSRNOG00000014588	Dbr1	100	92.909	ENSMUSG00000032469	Dbr1	100	99.387	Mus_musculus
ENSRNOG00000014588	Dbr1	100	94.128	MGP_PahariEiJ_G0015433	Dbr1	100	99.387	Mus_pahari
ENSRNOG00000014588	Dbr1	100	93.419	MGP_SPRETEiJ_G0033708	Dbr1	100	99.387	Mus_spretus
ENSRNOG00000014588	Dbr1	98	86.355	ENSMPUG00000009230	DBR1	99	86.372	Mustela_putorius_furo
ENSRNOG00000014588	Dbr1	98	83.054	ENSMLUG00000026117	DBR1	99	83.303	Myotis_lucifugus
ENSRNOG00000014588	Dbr1	99	86.900	ENSNGAG00000003518	Dbr1	99	88.007	Nannospalax_galili
ENSRNOG00000014588	Dbr1	99	54.754	ENSNBRG00000016318	dbr1	99	55.556	Neolamprologus_brichardi
ENSRNOG00000014588	Dbr1	99	85.316	ENSNLEG00000032263	DBR1	98	84.799	Nomascus_leucogenys
ENSRNOG00000014588	Dbr1	99	74.359	ENSMEUG00000009188	DBR1	100	74.359	Notamacropus_eugenii
ENSRNOG00000014588	Dbr1	93	72.387	ENSOPRG00000016510	DBR1	100	72.387	Ochotona_princeps
ENSRNOG00000014588	Dbr1	99	83.088	ENSODEG00000018178	DBR1	99	83.088	Octodon_degus
ENSRNOG00000014588	Dbr1	99	54.255	ENSONIG00000013801	dbr1	99	55.458	Oreochromis_niloticus
ENSRNOG00000014588	Dbr1	88	70.528	ENSOANG00000007783	DBR1	100	70.528	Ornithorhynchus_anatinus
ENSRNOG00000014588	Dbr1	93	85.490	ENSOCUG00000015129	DBR1	90	85.271	Oryctolagus_cuniculus
ENSRNOG00000014588	Dbr1	100	56.727	ENSORLG00015001112	dbr1	99	56.884	Oryzias_latipes_hsok
ENSRNOG00000014588	Dbr1	100	55.576	ENSOMEG00000000857	dbr1	99	55.235	Oryzias_melastigma
ENSRNOG00000014588	Dbr1	97	86.090	ENSOGAG00000033095	DBR1	99	86.162	Otolemur_garnettii
ENSRNOG00000014588	Dbr1	99	83.241	ENSOARG00000007589	DBR1	99	83.241	Ovis_aries
ENSRNOG00000014588	Dbr1	98	85.234	ENSPPAG00000031137	DBR1	99	85.240	Pan_paniscus
ENSRNOG00000014588	Dbr1	98	87.290	ENSPPRG00000013629	DBR1	99	87.293	Panthera_pardus
ENSRNOG00000014588	Dbr1	96	86.807	ENSPTIG00000012674	DBR1	98	86.817	Panthera_tigris_altaica
ENSRNOG00000014588	Dbr1	98	85.047	ENSPTRG00000015441	DBR1	99	85.055	Pan_troglodytes
ENSRNOG00000014588	Dbr1	97	85.338	ENSPANG00000012664	DBR1	99	85.424	Papio_anubis
ENSRNOG00000014588	Dbr1	99	56.514	ENSPKIG00000000310	dbr1	99	56.514	Paramormyrops_kingsleyae
ENSRNOG00000014588	Dbr1	87	70.021	ENSPSIG00000015486	DBR1	99	70.021	Pelodiscus_sinensis
ENSRNOG00000014588	Dbr1	98	91.199	ENSPEMG00000020602	Dbr1	99	90.659	Peromyscus_maniculatus_bairdii
ENSRNOG00000014588	Dbr1	70	60.526	ENSPMAG00000008620	dbr1	100	60.526	Petromyzon_marinus
ENSRNOG00000014588	Dbr1	99	73.675	ENSPCIG00000006494	DBR1	99	73.675	Phascolarctos_cinereus
ENSRNOG00000014588	Dbr1	69	45.078	ENSPLAG00000002421	-	99	46.316	Poecilia_latipinna
ENSRNOG00000014588	Dbr1	99	56.044	ENSPLAG00000011665	dbr1	99	56.227	Poecilia_latipinna
ENSRNOG00000014588	Dbr1	99	55.941	ENSPMEG00000010080	dbr1	99	55.941	Poecilia_mexicana
ENSRNOG00000014588	Dbr1	70	45.855	ENSPMEG00000020884	-	94	45.855	Poecilia_mexicana
ENSRNOG00000014588	Dbr1	99	56.000	ENSPREG00000020157	dbr1	99	56.000	Poecilia_reticulata
ENSRNOG00000014588	Dbr1	99	85.688	ENSPPYG00000014139	DBR1	99	85.165	Pongo_abelii
ENSRNOG00000014588	Dbr1	71	88.689	ENSPCAG00000012956	DBR1	99	88.689	Procavia_capensis
ENSRNOG00000014588	Dbr1	98	86.355	ENSPCOG00000016894	DBR1	99	85.688	Propithecus_coquereli
ENSRNOG00000014588	Dbr1	98	77.009	ENSPVAG00000007713	DBR1	99	77.164	Pteropus_vampyrus
ENSRNOG00000014588	Dbr1	99	54.657	ENSPNYG00000015453	dbr1	99	55.360	Pundamilia_nyererei
ENSRNOG00000014588	Dbr1	99	54.704	ENSPNAG00000025595	dbr1	100	56.174	Pygocentrus_nattereri
ENSRNOG00000014588	Dbr1	98	85.047	ENSRBIG00000045002	DBR1	99	85.055	Rhinopithecus_bieti
ENSRNOG00000014588	Dbr1	98	85.234	ENSRROG00000044819	DBR1	99	85.240	Rhinopithecus_roxellana
ENSRNOG00000014588	Dbr1	51	40.000	YKL149C	DBR1	79	40.000	Saccharomyces_cerevisiae
ENSRNOG00000014588	Dbr1	98	84.831	ENSSBOG00000032048	DBR1	99	84.843	Saimiri_boliviensis_boliviensis
ENSRNOG00000014588	Dbr1	99	73.810	ENSSHAG00000006752	DBR1	99	73.810	Sarcophilus_harrisii
ENSRNOG00000014588	Dbr1	99	57.194	ENSSFOG00015011410	dbr1	100	57.734	Scleropages_formosus
ENSRNOG00000014588	Dbr1	100	55.300	ENSSMAG00000016078	dbr1	100	55.319	Scophthalmus_maximus
ENSRNOG00000014588	Dbr1	99	55.070	ENSSDUG00000017849	dbr1	100	55.382	Seriola_dumerili
ENSRNOG00000014588	Dbr1	99	54.912	ENSSLDG00000019891	dbr1	100	55.226	Seriola_lalandi_dorsalis
ENSRNOG00000014588	Dbr1	99	72.928	ENSSARG00000009558	-	99	72.928	Sorex_araneus
ENSRNOG00000014588	Dbr1	52	90.667	ENSSARG00000003148	-	74	90.667	Sorex_araneus
ENSRNOG00000014588	Dbr1	88	64.139	ENSSPUG00000004724	DBR1	93	64.754	Sphenodon_punctatus
ENSRNOG00000014588	Dbr1	99	56.781	ENSSPAG00000016892	dbr1	99	56.781	Stegastes_partitus
ENSRNOG00000014588	Dbr1	99	85.635	ENSSSCG00000031098	DBR1	99	85.635	Sus_scrofa
ENSRNOG00000014588	Dbr1	93	70.312	ENSTGUG00000007073	DBR1	97	70.059	Taeniopygia_guttata
ENSRNOG00000014588	Dbr1	99	52.575	ENSTRUG00000021594	dbr1	98	52.398	Takifugu_rubripes
ENSRNOG00000014588	Dbr1	100	54.234	ENSTNIG00000006710	dbr1	100	54.414	Tetraodon_nigroviridis
ENSRNOG00000014588	Dbr1	99	85.635	ENSTTRG00000004020	DBR1	99	85.635	Tursiops_truncatus
ENSRNOG00000014588	Dbr1	99	85.635	ENSUAMG00000004639	DBR1	99	85.635	Ursus_americanus
ENSRNOG00000014588	Dbr1	98	85.794	ENSUMAG00000015012	DBR1	99	85.820	Ursus_maritimus
ENSRNOG00000014588	Dbr1	99	79.336	ENSVPAG00000011711	DBR1	99	80.258	Vicugna_pacos
ENSRNOG00000014588	Dbr1	98	85.234	ENSVVUG00000026604	DBR1	99	85.267	Vulpes_vulpes
ENSRNOG00000014588	Dbr1	99	63.838	ENSXETG00000027491	dbr1	99	63.838	Xenopus_tropicalis
ENSRNOG00000014588	Dbr1	99	56.466	ENSXCOG00000018078	dbr1	99	56.284	Xiphophorus_couchianus
ENSRNOG00000014588	Dbr1	99	56.387	ENSXMAG00000007311	dbr1	99	56.204	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000375	RNA splicing, via transesterification reactions	-	ISO	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0008419	RNA lariat debranching enzyme activity	21873635.	IBA	Function
GO:0008419	RNA lariat debranching enzyme activity	-	ISO	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process