EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014619 (Gene tree)
Gene ID: 292007
Gene Symbol: Dhx38
Alias: LOC292007
Full Name: DEAH-box helicase 38
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 17216 bases
Position: chr19:42110327-42127542
Accession: 1310345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000019810	DEAD	PF00270.29	1.4e-07	1	1
ENSRNOP00000019810	HA2	PF04408.23	1.8e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000019810	-	4426	XM_006255577	ENSRNOP00000019810	1227 (aa)	XP_006255639	D4A321

Gene Model

Click here to download ENSRNOG00000014619's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000014619	Dhx38	51	43.937	ENSRNOG00000007054	Dhx33	90	43.937
ENSRNOG00000014619	Dhx38	53	45.414	ENSRNOG00000003844	Dhx15	82	45.593
ENSRNOG00000014619	Dhx38	54	38.549	ENSRNOG00000004549	Dhx40	84	40.429
ENSRNOG00000014619	Dhx38	51	31.125	ENSRNOG00000018119	Dhx32	86	31.125
ENSRNOG00000014619	Dhx38	51	39.806	ENSRNOG00000054272	Dhx57	55	37.555
ENSRNOG00000014619	Dhx38	50	30.265	ENSRNOG00000014599	Dhx36	71	30.265
ENSRNOG00000014619	Dhx38	54	30.928	ENSRNOG00000008062	Dqx1	89	30.793
ENSRNOG00000014619	Dhx38	57	48.892	ENSRNOG00000030157	Dhx16	67	49.644
ENSRNOG00000014619	Dhx38	68	45.761	ENSRNOG00000020772	Dhx8	67	47.031
ENSRNOG00000014619	Dhx38	52	44.158	ENSRNOG00000015928	Dhx35	91	44.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014619	Dhx38	100	97.555	ENSG00000140829	DHX38	99	100.000	Homo_sapiens
ENSRNOG00000014619	Dhx38	99	81.484	ENSAPOG00000010788	dhx38	99	81.405	Acanthochromis_polyacanthus
ENSRNOG00000014619	Dhx38	100	97.640	ENSAMEG00000002227	DHX38	99	97.640	Ailuropoda_melanoleuca
ENSRNOG00000014619	Dhx38	99	81.120	ENSACIG00000000573	dhx38	99	81.120	Amphilophus_citrinellus
ENSRNOG00000014619	Dhx38	99	82.581	ENSAOCG00000007610	dhx38	99	82.581	Amphiprion_ocellaris
ENSRNOG00000014619	Dhx38	80	79.608	ENSAOCG00000013483	-	98	79.314	Amphiprion_ocellaris
ENSRNOG00000014619	Dhx38	99	81.161	ENSAPEG00000011410	dhx38	99	81.161	Amphiprion_percula
ENSRNOG00000014619	Dhx38	99	80.048	ENSATEG00000004692	dhx38	99	79.968	Anabas_testudineus
ENSRNOG00000014619	Dhx38	91	93.073	ENSAPLG00000015279	DHX38	100	93.073	Anas_platyrhynchos
ENSRNOG00000014619	Dhx38	99	80.367	ENSACAG00000008115	DHX38	99	80.208	Anolis_carolinensis
ENSRNOG00000014619	Dhx38	100	97.718	ENSANAG00000022259	DHX38	100	97.718	Aotus_nancymaae
ENSRNOG00000014619	Dhx38	99	78.514	ENSACLG00000001837	dhx38	99	78.998	Astatotilapia_calliptera
ENSRNOG00000014619	Dhx38	97	80.795	ENSAMXG00000004396	dhx38	97	80.415	Astyanax_mexicanus
ENSRNOG00000014619	Dhx38	100	96.985	ENSBTAG00000013265	DHX38	100	96.985	Bos_taurus
ENSRNOG00000014619	Dhx38	87	58.818	WBGene00003389	mog-1	87	61.067	Caenorhabditis_elegans
ENSRNOG00000014619	Dhx38	100	97.800	ENSCJAG00000015103	DHX38	100	97.800	Callithrix_jacchus
ENSRNOG00000014619	Dhx38	100	97.392	ENSCAFG00000020228	DHX38	100	97.392	Canis_familiaris
ENSRNOG00000014619	Dhx38	100	96.824	ENSCAFG00020020392	DHX38	100	96.824	Canis_lupus_dingo
ENSRNOG00000014619	Dhx38	100	97.066	ENSCHIG00000027105	DHX38	100	97.066	Capra_hircus
ENSRNOG00000014619	Dhx38	100	97.720	ENSTSYG00000012023	DHX38	100	97.720	Carlito_syrichta
ENSRNOG00000014619	Dhx38	100	96.766	ENSCAPG00000016032	DHX38	100	96.766	Cavia_aperea
ENSRNOG00000014619	Dhx38	100	97.720	ENSCPOG00000013965	DHX38	99	97.720	Cavia_porcellus
ENSRNOG00000014619	Dhx38	100	97.718	ENSCCAG00000031157	DHX38	100	97.718	Cebus_capucinus
ENSRNOG00000014619	Dhx38	100	91.093	ENSCATG00000036889	DHX38	100	91.093	Cercocebus_atys
ENSRNOG00000014619	Dhx38	100	97.637	ENSCLAG00000008250	DHX38	100	97.637	Chinchilla_lanigera
ENSRNOG00000014619	Dhx38	100	97.800	ENSCSAG00000004218	DHX38	100	97.800	Chlorocebus_sabaeus
ENSRNOG00000014619	Dhx38	55	93.501	ENSCHOG00000009444	-	100	93.501	Choloepus_hoffmanni
ENSRNOG00000014619	Dhx38	100	90.784	ENSCPBG00000027010	DHX38	100	91.108	Chrysemys_picta_bellii
ENSRNOG00000014619	Dhx38	97	63.071	ENSCING00000003597	-	98	63.049	Ciona_intestinalis
ENSRNOG00000014619	Dhx38	100	64.078	ENSCSAVG00000001117	-	100	79.556	Ciona_savignyi
ENSRNOG00000014619	Dhx38	100	97.637	ENSCANG00000039299	DHX38	100	97.637	Colobus_angolensis_palliatus
ENSRNOG00000014619	Dhx38	100	98.370	ENSCGRG00001021542	Dhx38	100	98.370	Cricetulus_griseus_chok1gshd
ENSRNOG00000014619	Dhx38	100	98.370	ENSCGRG00000017386	Dhx38	100	98.370	Cricetulus_griseus_crigri
ENSRNOG00000014619	Dhx38	99	80.239	ENSCSEG00000008437	dhx38	99	79.409	Cynoglossus_semilaevis
ENSRNOG00000014619	Dhx38	99	80.637	ENSCVAG00000023150	dhx38	99	80.080	Cyprinodon_variegatus
ENSRNOG00000014619	Dhx38	99	79.777	ENSDARG00000100013	dhx38	99	79.618	Danio_rerio
ENSRNOG00000014619	Dhx38	100	97.392	ENSDNOG00000006717	DHX38	100	97.392	Dasypus_novemcinctus
ENSRNOG00000014619	Dhx38	100	98.290	ENSDORG00000005226	Dhx38	100	98.290	Dipodomys_ordii
ENSRNOG00000014619	Dhx38	99	60.222	FBgn0026713	l(1)G0007	100	73.198	Drosophila_melanogaster
ENSRNOG00000014619	Dhx38	61	100.000	ENSETEG00000014663	-	67	100.000	Echinops_telfairi
ENSRNOG00000014619	Dhx38	99	72.411	ENSEBUG00000005875	dhx38	99	71.764	Eptatretus_burgeri
ENSRNOG00000014619	Dhx38	100	97.800	ENSEASG00005013249	DHX38	100	97.750	Equus_asinus_asinus
ENSRNOG00000014619	Dhx38	100	97.800	ENSECAG00000000526	DHX38	99	97.800	Equus_caballus
ENSRNOG00000014619	Dhx38	100	75.342	ENSELUG00000014379	dhx38	100	75.061	Esox_lucius
ENSRNOG00000014619	Dhx38	100	97.637	ENSFCAG00000005831	DHX38	100	97.637	Felis_catus
ENSRNOG00000014619	Dhx38	99	86.832	ENSFALG00000002671	DHX38	100	86.981	Ficedula_albicollis
ENSRNOG00000014619	Dhx38	100	97.637	ENSFDAG00000015601	DHX38	100	97.637	Fukomys_damarensis
ENSRNOG00000014619	Dhx38	99	80.671	ENSFHEG00000006031	dhx38	99	80.591	Fundulus_heteroclitus
ENSRNOG00000014619	Dhx38	99	80.256	ENSGMOG00000002840	dhx38	99	80.416	Gadus_morhua
ENSRNOG00000014619	Dhx38	100	88.979	ENSGALG00000000787	DHX38	100	89.465	Gallus_gallus
ENSRNOG00000014619	Dhx38	99	80.398	ENSGAFG00000017271	dhx38	99	79.761	Gambusia_affinis
ENSRNOG00000014619	Dhx38	99	81.270	ENSGACG00000015776	dhx38	99	80.707	Gasterosteus_aculeatus
ENSRNOG00000014619	Dhx38	100	90.542	ENSGAGG00000015601	DHX38	100	91.027	Gopherus_agassizii
ENSRNOG00000014619	Dhx38	100	97.637	ENSGGOG00000013052	DHX38	100	97.637	Gorilla_gorilla
ENSRNOG00000014619	Dhx38	99	79.984	ENSHBUG00000013363	dhx38	99	79.905	Haplochromis_burtoni
ENSRNOG00000014619	Dhx38	100	97.718	ENSHGLG00000013308	DHX38	100	97.718	Heterocephalus_glaber_female
ENSRNOG00000014619	Dhx38	100	96.903	ENSHGLG00100015625	DHX38	100	96.903	Heterocephalus_glaber_male
ENSRNOG00000014619	Dhx38	99	80.080	ENSHCOG00000003102	dhx38	99	80.402	Hippocampus_comes
ENSRNOG00000014619	Dhx38	100	80.945	ENSIPUG00000006233	DHX38	100	81.185	Ictalurus_punctatus
ENSRNOG00000014619	Dhx38	100	98.534	ENSSTOG00000000534	DHX38	100	98.534	Ictidomys_tridecemlineatus
ENSRNOG00000014619	Dhx38	93	98.831	ENSJJAG00000015149	Dhx38	99	98.831	Jaculus_jaculus
ENSRNOG00000014619	Dhx38	99	81.340	ENSKMAG00000006694	dhx38	99	80.941	Kryptolebias_marmoratus
ENSRNOG00000014619	Dhx38	99	79.664	ENSLBEG00000026364	dhx38	99	79.872	Labrus_bergylta
ENSRNOG00000014619	Dhx38	99	81.412	ENSLACG00000013007	DHX38	99	81.737	Latimeria_chalumnae
ENSRNOG00000014619	Dhx38	100	82.114	ENSLOCG00000004169	dhx38	100	82.578	Lepisosteus_oculatus
ENSRNOG00000014619	Dhx38	100	97.720	ENSLAFG00000016360	DHX38	100	97.720	Loxodonta_africana
ENSRNOG00000014619	Dhx38	100	97.800	ENSMFAG00000031852	DHX38	100	97.800	Macaca_fascicularis
ENSRNOG00000014619	Dhx38	100	97.718	ENSMMUG00000000677	DHX38	100	97.718	Macaca_mulatta
ENSRNOG00000014619	Dhx38	100	97.800	ENSMNEG00000045083	DHX38	100	97.800	Macaca_nemestrina
ENSRNOG00000014619	Dhx38	100	97.718	ENSMLEG00000029417	DHX38	100	97.718	Mandrillus_leucophaeus
ENSRNOG00000014619	Dhx38	99	80.350	ENSMAMG00000021512	dhx38	99	79.873	Mastacembelus_armatus
ENSRNOG00000014619	Dhx38	99	76.911	ENSMZEG00005014283	dhx38	99	77.229	Maylandia_zebra
ENSRNOG00000014619	Dhx38	91	92.349	ENSMGAG00000008791	DHX38	99	92.705	Meleagris_gallopavo
ENSRNOG00000014619	Dhx38	84	98.263	ENSMAUG00000006330	Dhx38	100	99.216	Mesocricetus_auratus
ENSRNOG00000014619	Dhx38	100	98.126	ENSMICG00000011402	DHX38	100	98.126	Microcebus_murinus
ENSRNOG00000014619	Dhx38	100	94.309	ENSMOCG00000016798	Dhx38	100	94.146	Microtus_ochrogaster
ENSRNOG00000014619	Dhx38	99	81.275	ENSMMOG00000016558	dhx38	99	81.826	Mola_mola
ENSRNOG00000014619	Dhx38	100	94.797	ENSMODG00000002549	DHX38	100	94.797	Monodelphis_domestica
ENSRNOG00000014619	Dhx38	99	80.190	ENSMALG00000021005	dhx38	99	79.635	Monopterus_albus
ENSRNOG00000014619	Dhx38	100	98.453	MGP_CAROLIEiJ_G0031541	Dhx38	100	98.453	Mus_caroli
ENSRNOG00000014619	Dhx38	100	98.290	ENSMUSG00000037993	Dhx38	100	98.290	Mus_musculus
ENSRNOG00000014619	Dhx38	100	98.779	MGP_PahariEiJ_G0023141	Dhx38	100	98.779	Mus_pahari
ENSRNOG00000014619	Dhx38	100	98.453	MGP_SPRETEiJ_G0032659	Dhx38	100	98.453	Mus_spretus
ENSRNOG00000014619	Dhx38	100	97.392	ENSMPUG00000007766	DHX38	100	97.392	Mustela_putorius_furo
ENSRNOG00000014619	Dhx38	100	97.229	ENSMLUG00000013866	DHX38	100	97.229	Myotis_lucifugus
ENSRNOG00000014619	Dhx38	100	98.289	ENSNGAG00000014084	Dhx38	100	98.289	Nannospalax_galili
ENSRNOG00000014619	Dhx38	99	78.727	ENSNBRG00000010899	dhx38	99	78.727	Neolamprologus_brichardi
ENSRNOG00000014619	Dhx38	100	97.392	ENSNLEG00000005630	DHX38	100	97.392	Nomascus_leucogenys
ENSRNOG00000014619	Dhx38	55	96.653	ENSMEUG00000007747	-	72	96.653	Notamacropus_eugenii
ENSRNOG00000014619	Dhx38	100	84.947	ENSOPRG00000012142	-	100	83.564	Ochotona_princeps
ENSRNOG00000014619	Dhx38	99	95.752	ENSOPRG00000001884	DHX38	99	95.752	Ochotona_princeps
ENSRNOG00000014619	Dhx38	100	97.474	ENSODEG00000015472	DHX38	100	97.474	Octodon_degus
ENSRNOG00000014619	Dhx38	99	79.508	ENSONIG00000005916	dhx38	99	79.905	Oreochromis_niloticus
ENSRNOG00000014619	Dhx38	100	96.985	ENSOCUG00000009067	DHX38	100	96.985	Oryctolagus_cuniculus
ENSRNOG00000014619	Dhx38	99	80.637	ENSORLG00000007853	dhx38	99	80.398	Oryzias_latipes
ENSRNOG00000014619	Dhx38	99	80.239	ENSORLG00020009844	dhx38	99	80.398	Oryzias_latipes_hni
ENSRNOG00000014619	Dhx38	99	80.319	ENSORLG00015007999	dhx38	99	80.478	Oryzias_latipes_hsok
ENSRNOG00000014619	Dhx38	99	80.686	ENSOMEG00000001782	dhx38	99	80.447	Oryzias_melastigma
ENSRNOG00000014619	Dhx38	100	97.396	ENSOGAG00000008658	DHX38	100	97.396	Otolemur_garnettii
ENSRNOG00000014619	Dhx38	100	93.339	ENSOARG00000003723	DHX38	100	92.933	Ovis_aries
ENSRNOG00000014619	Dhx38	100	97.555	ENSPPAG00000042488	DHX38	100	97.555	Pan_paniscus
ENSRNOG00000014619	Dhx38	100	97.637	ENSPPRG00000008930	DHX38	100	97.637	Panthera_pardus
ENSRNOG00000014619	Dhx38	100	97.637	ENSPTIG00000017274	DHX38	100	97.637	Panthera_tigris_altaica
ENSRNOG00000014619	Dhx38	100	97.474	ENSPTRG00000008338	DHX38	100	97.474	Pan_troglodytes
ENSRNOG00000014619	Dhx38	100	97.718	ENSPANG00000022057	DHX38	100	97.718	Papio_anubis
ENSRNOG00000014619	Dhx38	100	81.345	ENSPKIG00000009708	dhx38	100	81.345	Paramormyrops_kingsleyae
ENSRNOG00000014619	Dhx38	99	79.274	ENSPMGG00000006063	dhx38	99	79.419	Periophthalmus_magnuspinnatus
ENSRNOG00000014619	Dhx38	100	98.290	ENSPEMG00000008011	Dhx38	100	98.290	Peromyscus_maniculatus_bairdii
ENSRNOG00000014619	Dhx38	100	94.634	ENSPCIG00000001712	DHX38	100	94.763	Phascolarctos_cinereus
ENSRNOG00000014619	Dhx38	99	80.190	ENSPFOG00000001246	dhx38	99	79.556	Poecilia_formosa
ENSRNOG00000014619	Dhx38	99	80.398	ENSPLAG00000004022	dhx38	99	79.920	Poecilia_latipinna
ENSRNOG00000014619	Dhx38	99	80.637	ENSPMEG00000015475	dhx38	99	80.159	Poecilia_mexicana
ENSRNOG00000014619	Dhx38	99	81.517	ENSPREG00000023207	dhx38	99	81.033	Poecilia_reticulata
ENSRNOG00000014619	Dhx38	100	97.068	ENSPPYG00000007515	DHX38	100	97.068	Pongo_abelii
ENSRNOG00000014619	Dhx38	92	95.113	ENSPCAG00000010592	DHX38	93	95.113	Procavia_capensis
ENSRNOG00000014619	Dhx38	100	98.126	ENSPCOG00000027770	DHX38	100	98.126	Propithecus_coquereli
ENSRNOG00000014619	Dhx38	94	97.213	ENSPVAG00000010259	DHX38	100	97.213	Pteropus_vampyrus
ENSRNOG00000014619	Dhx38	99	80.856	ENSPNYG00000013335	dhx38	99	81.341	Pundamilia_nyererei
ENSRNOG00000014619	Dhx38	100	80.853	ENSPNAG00000004859	dhx38	100	81.365	Pygocentrus_nattereri
ENSRNOG00000014619	Dhx38	100	97.800	ENSRBIG00000025475	DHX38	100	97.800	Rhinopithecus_bieti
ENSRNOG00000014619	Dhx38	100	97.800	ENSRROG00000028630	DHX38	100	97.800	Rhinopithecus_roxellana
ENSRNOG00000014619	Dhx38	61	49.233	YKR086W	PRP16	71	49.233	Saccharomyces_cerevisiae
ENSRNOG00000014619	Dhx38	100	97.637	ENSSBOG00000021842	DHX38	100	97.637	Saimiri_boliviensis_boliviensis
ENSRNOG00000014619	Dhx38	100	85.251	ENSSHAG00000016871	DHX38	100	85.275	Sarcophilus_harrisii
ENSRNOG00000014619	Dhx38	100	80.507	ENSSFOG00015014930	dhx38	100	80.824	Scleropages_formosus
ENSRNOG00000014619	Dhx38	99	81.055	ENSSMAG00000000095	dhx38	99	80.720	Scophthalmus_maximus
ENSRNOG00000014619	Dhx38	99	82.229	ENSSDUG00000001413	dhx38	99	81.987	Seriola_dumerili
ENSRNOG00000014619	Dhx38	99	78.998	ENSSLDG00000021050	dhx38	99	78.837	Seriola_lalandi_dorsalis
ENSRNOG00000014619	Dhx38	99	82.443	ENSSPAG00000020537	dhx38	99	81.781	Stegastes_partitus
ENSRNOG00000014619	Dhx38	100	97.800	ENSSSCG00000002748	DHX38	100	97.800	Sus_scrofa
ENSRNOG00000014619	Dhx38	100	85.807	ENSTGUG00000008196	DHX38	100	85.645	Taeniopygia_guttata
ENSRNOG00000014619	Dhx38	99	80.305	ENSTRUG00000017588	dhx38	99	80.466	Takifugu_rubripes
ENSRNOG00000014619	Dhx38	99	79.305	ENSTNIG00000009345	dhx38	99	79.028	Tetraodon_nigroviridis
ENSRNOG00000014619	Dhx38	100	85.819	ENSTBEG00000001426	DHX38	100	85.819	Tupaia_belangeri
ENSRNOG00000014619	Dhx38	100	91.769	ENSTTRG00000001914	DHX38	100	91.443	Tursiops_truncatus
ENSRNOG00000014619	Dhx38	100	97.559	ENSUAMG00000020435	DHX38	100	97.559	Ursus_americanus
ENSRNOG00000014619	Dhx38	100	96.333	ENSUMAG00000018189	DHX38	100	96.333	Ursus_maritimus
ENSRNOG00000014619	Dhx38	100	97.392	ENSVVUG00000017474	DHX38	100	97.392	Vulpes_vulpes
ENSRNOG00000014619	Dhx38	98	81.645	ENSXETG00000023447	dhx38	100	81.992	Xenopus_tropicalis
ENSRNOG00000014619	Dhx38	99	81.496	ENSXCOG00000011321	dhx38	99	81.109	Xiphophorus_couchianus
ENSRNOG00000014619	Dhx38	99	80.876	ENSXMAG00000003292	dhx38	99	80.494	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function
GO:0071013	catalytic step 2 spliceosome	-	IEA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component