EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014806 (Gene tree)
Gene ID: 100188944
Gene Symbol: Pnkd
Alias: MGC188259|Mr-1
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 68461 bases
Position: chr9:81566074-81634534
Accession: 2300155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000020048	Lactamase_B	PF00753.27	1.4e-10	1	1
ENSRNOP00000071500	Lactamase_B	PF00753.27	1.5e-10	1	1
ENSRNOP00000049462	Lactamase_B	PF00753.27	1.6e-10	1	1
ENSRNOP00000068830	Lactamase_B	PF00753.27	1.1e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000090383	-	3065	-	ENSRNOP00000068830	369 (aa)	-	B4F7D2
ENSRNOT00000089580	-	626	-	ENSRNOP00000071630	125 (aa)	-	A0A0G2K0Y5
ENSRNOT00000081406	-	490	-	-	- (aa)	-	-
ENSRNOT00000074131	-	624	-	ENSRNOP00000066948	142 (aa)	-	M0RBK9
ENSRNOT00000081106	-	811	-	ENSRNOP00000071500	269 (aa)	-	A0A0G2K0M0
ENSRNOT00000046229	-	2877	-	ENSRNOP00000049462	385 (aa)	-	F1M1E4
ENSRNOT00000020049	-	2797	-	ENSRNOP00000020048	360 (aa)	-	D3ZXB0

Gene Model

Click here to download ENSRNOG00000014806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000014806	Pnkd	74	40.602	ENSRNOG00000014743	Hagh	83	40.602
ENSRNOG00000014806	Pnkd	65	41.477	ENSRNOG00000019612	Haghl	80	42.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014806	Pnkd	100	95.844	ENSG00000127838	PNKD	100	95.844	Homo_sapiens
ENSRNOG00000014806	Pnkd	85	65.789	ENSAPOG00000019072	pnkd	89	61.442	Acanthochromis_polyacanthus
ENSRNOG00000014806	Pnkd	100	95.325	ENSAMEG00000003089	PNKD	100	95.325	Ailuropoda_melanoleuca
ENSRNOG00000014806	Pnkd	97	53.763	ENSACIG00000015359	pnkd	96	53.763	Amphilophus_citrinellus
ENSRNOG00000014806	Pnkd	85	65.351	ENSAOCG00000011458	-	89	61.129	Amphiprion_ocellaris
ENSRNOG00000014806	Pnkd	85	65.351	ENSAOCG00000024159	pnkd	86	58.667	Amphiprion_ocellaris
ENSRNOG00000014806	Pnkd	85	65.351	ENSAPEG00000011710	pnkd	89	61.129	Amphiprion_percula
ENSRNOG00000014806	Pnkd	85	65.351	ENSATEG00000002727	pnkd	90	60.815	Anabas_testudineus
ENSRNOG00000014806	Pnkd	85	66.812	ENSACAG00000001617	PNKD	99	55.435	Anolis_carolinensis
ENSRNOG00000014806	Pnkd	100	95.844	ENSANAG00000019661	PNKD	100	95.844	Aotus_nancymaae
ENSRNOG00000014806	Pnkd	95	59.475	ENSACLG00000021665	pnkd	89	61.755	Astatotilapia_calliptera
ENSRNOG00000014806	Pnkd	100	59.259	ENSAMXG00000043305	pnkd	90	61.656	Astyanax_mexicanus
ENSRNOG00000014806	Pnkd	100	90.000	ENSBTAG00000003936	PNKD	100	90.000	Bos_taurus
ENSRNOG00000014806	Pnkd	100	95.844	ENSCJAG00000010820	PNKD	100	95.844	Callithrix_jacchus
ENSRNOG00000014806	Pnkd	100	93.247	ENSCAFG00000014632	PNKD	100	93.247	Canis_familiaris
ENSRNOG00000014806	Pnkd	100	90.000	ENSCAFG00020027093	PNKD	100	90.000	Canis_lupus_dingo
ENSRNOG00000014806	Pnkd	100	94.805	ENSCHIG00000002862	PNKD	100	94.805	Capra_hircus
ENSRNOG00000014806	Pnkd	100	95.584	ENSTSYG00000034863	PNKD	100	95.584	Carlito_syrichta
ENSRNOG00000014806	Pnkd	100	95.844	ENSCPOG00000020589	PNKD	100	95.844	Cavia_porcellus
ENSRNOG00000014806	Pnkd	100	95.584	ENSCCAG00000036713	PNKD	100	95.584	Cebus_capucinus
ENSRNOG00000014806	Pnkd	100	96.104	ENSCATG00000041188	PNKD	100	96.104	Cercocebus_atys
ENSRNOG00000014806	Pnkd	100	96.623	ENSCLAG00000012048	PNKD	100	96.623	Chinchilla_lanigera
ENSRNOG00000014806	Pnkd	100	96.104	ENSCSAG00000008892	PNKD	100	96.104	Chlorocebus_sabaeus
ENSRNOG00000014806	Pnkd	100	96.104	ENSCANG00000032283	PNKD	100	96.104	Colobus_angolensis_palliatus
ENSRNOG00000014806	Pnkd	100	98.442	ENSCGRG00001024071	Pnkd	100	98.442	Cricetulus_griseus_chok1gshd
ENSRNOG00000014806	Pnkd	100	98.141	ENSCGRG00000005443	Pnkd	100	97.500	Cricetulus_griseus_crigri
ENSRNOG00000014806	Pnkd	98	57.895	ENSCSEG00000013958	pnkd	91	59.077	Cynoglossus_semilaevis
ENSRNOG00000014806	Pnkd	85	66.228	ENSCVAG00000005723	pnkd	89	61.442	Cyprinodon_variegatus
ENSRNOG00000014806	Pnkd	100	56.296	ENSDARG00000071032	pnkd	89	61.250	Danio_rerio
ENSRNOG00000014806	Pnkd	99	90.251	ENSDNOG00000046154	PNKD	89	89.444	Dasypus_novemcinctus
ENSRNOG00000014806	Pnkd	100	96.382	ENSDORG00000016109	Pnkd	100	96.382	Dipodomys_ordii
ENSRNOG00000014806	Pnkd	100	65.039	ENSETEG00000014587	PNKD	100	65.039	Echinops_telfairi
ENSRNOG00000014806	Pnkd	85	54.248	ENSEBUG00000013857	pnkd	98	54.054	Eptatretus_burgeri
ENSRNOG00000014806	Pnkd	100	90.000	ENSEASG00005012391	PNKD	100	90.000	Equus_asinus_asinus
ENSRNOG00000014806	Pnkd	100	94.286	ENSECAG00000013322	PNKD	100	94.286	Equus_caballus
ENSRNOG00000014806	Pnkd	97	56.667	ENSELUG00000015007	pnkd	86	60.129	Esox_lucius
ENSRNOG00000014806	Pnkd	100	90.000	ENSFCAG00000002373	PNKD	100	90.000	Felis_catus
ENSRNOG00000014806	Pnkd	86	62.460	ENSFALG00000004028	PNKD	95	61.950	Ficedula_albicollis
ENSRNOG00000014806	Pnkd	100	96.104	ENSFDAG00000012326	PNKD	100	96.104	Fukomys_damarensis
ENSRNOG00000014806	Pnkd	87	64.957	ENSFHEG00000010999	pnkd	86	61.442	Fundulus_heteroclitus
ENSRNOG00000014806	Pnkd	100	57.037	ENSGMOG00000009565	pnkd	89	60.436	Gadus_morhua
ENSRNOG00000014806	Pnkd	86	62.701	ENSGALG00000022166	PNKD	99	62.701	Gallus_gallus
ENSRNOG00000014806	Pnkd	85	66.228	ENSGAFG00000013942	pnkd	80	61.755	Gambusia_affinis
ENSRNOG00000014806	Pnkd	100	59.480	ENSGACG00000007119	pnkd	91	61.468	Gasterosteus_aculeatus
ENSRNOG00000014806	Pnkd	82	68.326	ENSGAGG00000017234	PNKD	100	61.321	Gopherus_agassizii
ENSRNOG00000014806	Pnkd	100	95.844	ENSGGOG00000006892	PNKD	100	95.844	Gorilla_gorilla
ENSRNOG00000014806	Pnkd	95	59.475	ENSHBUG00000001234	pnkd	89	61.755	Haplochromis_burtoni
ENSRNOG00000014806	Pnkd	100	95.584	ENSHGLG00000013971	PNKD	100	95.584	Heterocephalus_glaber_female
ENSRNOG00000014806	Pnkd	100	95.584	ENSHGLG00100005225	PNKD	100	95.584	Heterocephalus_glaber_male
ENSRNOG00000014806	Pnkd	100	59.489	ENSHCOG00000018894	pnkd	88	62.420	Hippocampus_comes
ENSRNOG00000014806	Pnkd	100	60.517	ENSIPUG00000013907	pnkd	99	63.844	Ictalurus_punctatus
ENSRNOG00000014806	Pnkd	100	97.662	ENSSTOG00000024593	PNKD	100	97.662	Ictidomys_tridecemlineatus
ENSRNOG00000014806	Pnkd	100	94.545	ENSJJAG00000023559	Pnkd	100	95.584	Jaculus_jaculus
ENSRNOG00000014806	Pnkd	85	65.351	ENSKMAG00000014879	pnkd	89	61.129	Kryptolebias_marmoratus
ENSRNOG00000014806	Pnkd	89	61.442	ENSLBEG00000000985	pnkd	89	61.442	Labrus_bergylta
ENSRNOG00000014806	Pnkd	100	58.824	ENSLOCG00000000821	pnkd	89	61.755	Lepisosteus_oculatus
ENSRNOG00000014806	Pnkd	100	84.670	ENSLAFG00000007427	PNKD	100	84.670	Loxodonta_africana
ENSRNOG00000014806	Pnkd	100	96.104	ENSMFAG00000038281	PNKD	100	96.104	Macaca_fascicularis
ENSRNOG00000014806	Pnkd	67	97.790	ENSMMUG00000022819	-	100	97.790	Macaca_mulatta
ENSRNOG00000014806	Pnkd	100	92.244	ENSMNEG00000041541	PNKD	100	96.178	Macaca_nemestrina
ENSRNOG00000014806	Pnkd	100	96.104	ENSMLEG00000042812	PNKD	100	96.104	Mandrillus_leucophaeus
ENSRNOG00000014806	Pnkd	85	65.351	ENSMAMG00000017212	pnkd	89	61.129	Mastacembelus_armatus
ENSRNOG00000014806	Pnkd	82	62.034	ENSMZEG00005012514	pnkd	100	62.034	Maylandia_zebra
ENSRNOG00000014806	Pnkd	57	61.250	ENSMGAG00000011524	PNKD	100	56.696	Meleagris_gallopavo
ENSRNOG00000014806	Pnkd	100	97.778	ENSMAUG00000013099	Pnkd	100	97.778	Mesocricetus_auratus
ENSRNOG00000014806	Pnkd	100	97.143	ENSMICG00000042547	PNKD	100	97.143	Microcebus_murinus
ENSRNOG00000014806	Pnkd	100	98.705	ENSMOCG00000007956	Pnkd	100	98.705	Microtus_ochrogaster
ENSRNOG00000014806	Pnkd	86	61.812	ENSMMOG00000005679	pnkd	99	57.925	Mola_mola
ENSRNOG00000014806	Pnkd	86	79.421	ENSMODG00000015497	PNKD	97	73.043	Monodelphis_domestica
ENSRNOG00000014806	Pnkd	93	63.386	ENSMALG00000005967	pnkd	80	62.264	Monopterus_albus
ENSRNOG00000014806	Pnkd	100	98.961	MGP_CAROLIEiJ_G0014258	Pnkd	100	98.961	Mus_caroli
ENSRNOG00000014806	Pnkd	100	99.221	ENSMUSG00000026179	Pnkd	100	99.221	Mus_musculus
ENSRNOG00000014806	Pnkd	100	99.221	MGP_PahariEiJ_G0027496	Pnkd	100	99.221	Mus_pahari
ENSRNOG00000014806	Pnkd	100	98.961	MGP_SPRETEiJ_G0015064	Pnkd	100	98.961	Mus_spretus
ENSRNOG00000014806	Pnkd	100	91.078	ENSMPUG00000016531	PNKD	100	90.833	Mustela_putorius_furo
ENSRNOG00000014806	Pnkd	85	94.118	ENSMLUG00000004125	PNKD	100	94.118	Myotis_lucifugus
ENSRNOG00000014806	Pnkd	100	97.922	ENSNGAG00000014980	Pnkd	100	97.922	Nannospalax_galili
ENSRNOG00000014806	Pnkd	86	62.013	ENSNBRG00000020031	pnkd	96	61.812	Neolamprologus_brichardi
ENSRNOG00000014806	Pnkd	100	72.727	ENSMEUG00000011266	PNKD	100	72.727	Notamacropus_eugenii
ENSRNOG00000014806	Pnkd	100	94.722	ENSODEG00000009734	PNKD	100	94.722	Octodon_degus
ENSRNOG00000014806	Pnkd	95	58.892	ENSONIG00000004389	pnkd	89	61.129	Oreochromis_niloticus
ENSRNOG00000014806	Pnkd	100	84.434	ENSOCUG00000023754	PNKD	100	84.434	Oryctolagus_cuniculus
ENSRNOG00000014806	Pnkd	96	59.144	ENSORLG00000026276	pnkd	91	59.574	Oryzias_latipes
ENSRNOG00000014806	Pnkd	96	59.144	ENSORLG00020008373	pnkd	97	61.258	Oryzias_latipes_hni
ENSRNOG00000014806	Pnkd	89	59.574	ENSORLG00015005276	pnkd	91	59.574	Oryzias_latipes_hsok
ENSRNOG00000014806	Pnkd	87	62.821	ENSOMEG00000016106	pnkd	89	60.125	Oryzias_melastigma
ENSRNOG00000014806	Pnkd	85	96.405	ENSOGAG00000001792	PNKD	100	96.405	Otolemur_garnettii
ENSRNOG00000014806	Pnkd	100	95.065	ENSOARG00000019505	PNKD	100	95.065	Ovis_aries
ENSRNOG00000014806	Pnkd	100	95.844	ENSPPAG00000034969	PNKD	100	95.844	Pan_paniscus
ENSRNOG00000014806	Pnkd	100	90.000	ENSPPRG00000023720	PNKD	100	90.000	Panthera_pardus
ENSRNOG00000014806	Pnkd	100	88.312	ENSPTIG00000021040	PNKD	100	88.312	Panthera_tigris_altaica
ENSRNOG00000014806	Pnkd	100	95.584	ENSPTRG00000012914	PNKD	100	95.584	Pan_troglodytes
ENSRNOG00000014806	Pnkd	100	96.104	ENSPANG00000005752	PNKD	100	96.104	Papio_anubis
ENSRNOG00000014806	Pnkd	96	60.700	ENSPKIG00000011208	pnkd	100	60.063	Paramormyrops_kingsleyae
ENSRNOG00000014806	Pnkd	85	59.477	ENSPMGG00000005169	pnkd	100	59.477	Periophthalmus_magnuspinnatus
ENSRNOG00000014806	Pnkd	100	98.442	ENSPEMG00000010689	Pnkd	100	98.442	Peromyscus_maniculatus_bairdii
ENSRNOG00000014806	Pnkd	85	54.248	ENSPMAG00000006947	pnkd	99	54.248	Petromyzon_marinus
ENSRNOG00000014806	Pnkd	91	78.834	ENSPCIG00000021457	PNKD	90	78.834	Phascolarctos_cinereus
ENSRNOG00000014806	Pnkd	87	64.957	ENSPFOG00000010628	pnkd	88	62.222	Poecilia_formosa
ENSRNOG00000014806	Pnkd	83	65.625	ENSPLAG00000020583	pnkd	85	65.625	Poecilia_latipinna
ENSRNOG00000014806	Pnkd	87	64.530	ENSPMEG00000006542	pnkd	66	64.865	Poecilia_mexicana
ENSRNOG00000014806	Pnkd	87	64.103	ENSPREG00000014434	pnkd	88	61.587	Poecilia_reticulata
ENSRNOG00000014806	Pnkd	100	95.844	ENSPPYG00000013167	PNKD	100	95.844	Pongo_abelii
ENSRNOG00000014806	Pnkd	100	76.364	ENSPCAG00000003946	PNKD	100	76.364	Procavia_capensis
ENSRNOG00000014806	Pnkd	100	96.883	ENSPCOG00000019839	PNKD	100	96.883	Propithecus_coquereli
ENSRNOG00000014806	Pnkd	84	66.079	ENSPNYG00000016327	pnkd	100	61.950	Pundamilia_nyererei
ENSRNOG00000014806	Pnkd	100	60.000	ENSPNAG00000008655	pnkd	90	62.577	Pygocentrus_nattereri
ENSRNOG00000014806	Pnkd	100	96.104	ENSRBIG00000031614	PNKD	100	96.104	Rhinopithecus_bieti
ENSRNOG00000014806	Pnkd	100	96.104	ENSRROG00000045542	PNKD	100	96.104	Rhinopithecus_roxellana
ENSRNOG00000014806	Pnkd	100	95.325	ENSSBOG00000036000	PNKD	100	95.325	Saimiri_boliviensis_boliviensis
ENSRNOG00000014806	Pnkd	88	79.751	ENSSHAG00000016339	PNKD	100	79.751	Sarcophilus_harrisii
ENSRNOG00000014806	Pnkd	90	62.462	ENSSFOG00015013028	pnkd	87	62.462	Scleropages_formosus
ENSRNOG00000014806	Pnkd	96	59.846	ENSSMAG00000006812	pnkd	89	61.442	Scophthalmus_maximus
ENSRNOG00000014806	Pnkd	100	57.621	ENSSDUG00000012538	pnkd	89	60.502	Seriola_dumerili
ENSRNOG00000014806	Pnkd	87	63.248	ENSSLDG00000021431	pnkd	86	60.502	Seriola_lalandi_dorsalis
ENSRNOG00000014806	Pnkd	70	65.957	ENSSPUG00000018454	PNKD	98	51.634	Sphenodon_punctatus
ENSRNOG00000014806	Pnkd	85	65.351	ENSSPAG00000007083	pnkd	89	61.129	Stegastes_partitus
ENSRNOG00000014806	Pnkd	100	95.065	ENSSSCG00000029002	PNKD	100	95.065	Sus_scrofa
ENSRNOG00000014806	Pnkd	85	63.596	ENSTRUG00000009399	pnkd	89	59.561	Takifugu_rubripes
ENSRNOG00000014806	Pnkd	100	59.108	ENSTNIG00000010992	pnkd	90	60.062	Tetraodon_nigroviridis
ENSRNOG00000014806	Pnkd	100	93.247	ENSTTRG00000012895	PNKD	100	93.247	Tursiops_truncatus
ENSRNOG00000014806	Pnkd	100	89.722	ENSUAMG00000000289	PNKD	100	89.722	Ursus_americanus
ENSRNOG00000014806	Pnkd	100	79.481	ENSUMAG00000019639	PNKD	100	79.481	Ursus_maritimus
ENSRNOG00000014806	Pnkd	100	95.325	ENSVVUG00000007348	PNKD	100	95.325	Vulpes_vulpes
ENSRNOG00000014806	Pnkd	86	63.344	ENSXETG00000014931	pnkd	99	63.344	Xenopus_tropicalis
ENSRNOG00000014806	Pnkd	82	66.516	ENSXCOG00000014370	pnkd	95	62.338	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004416	hydroxyacylglutathione hydrolase activity	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0016020	membrane	-	ISO	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	-	IEA	Process
GO:0032225	regulation of synaptic transmission, dopaminergic	-	IEA	Process
GO:0032225	regulation of synaptic transmission, dopaminergic	-	ISO	Process
GO:0042053	regulation of dopamine metabolic process	-	IEA	Process
GO:0042053	regulation of dopamine metabolic process	-	ISO	Process
GO:0046929	negative regulation of neurotransmitter secretion	-	IEA	Process
GO:0046929	negative regulation of neurotransmitter secretion	-	ISO	Process
GO:0050884	neuromuscular process controlling posture	-	IEA	Process
GO:0050884	neuromuscular process controlling posture	-	ISO	Process