EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000014808 (Gene tree)
Gene ID: 291469
Gene Symbol: Srfbp1
Alias: MGC95245|p49/STRAP
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 24261 bases
Position: chr18:47456327-47480587
Accession: 1359398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000020030	BUD22	PF09073.10	7.6e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000020030	-	4675	-	ENSRNOP00000020030	442 (aa)	-	Q66H19

Gene Model

Click here to download ENSRNOG00000014808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014808	Srfbp1	98	67.361	ENSG00000151304	SRFBP1	100	67.361	Homo_sapiens
ENSRNOG00000014808	Srfbp1	96	63.551	ENSAMEG00000018050	SRFBP1	99	64.336	Ailuropoda_melanoleuca
ENSRNOG00000014808	Srfbp1	96	39.773	ENSACIG00000019127	-	98	40.227	Amphilophus_citrinellus
ENSRNOG00000014808	Srfbp1	73	56.618	ENSATEG00000007289	-	61	56.618	Anabas_testudineus
ENSRNOG00000014808	Srfbp1	98	43.177	ENSACAG00000003779	SRFBP1	100	43.177	Anolis_carolinensis
ENSRNOG00000014808	Srfbp1	98	65.057	ENSANAG00000022485	SRFBP1	100	65.057	Aotus_nancymaae
ENSRNOG00000014808	Srfbp1	96	36.275	ENSACLG00000013909	-	88	36.220	Astatotilapia_calliptera
ENSRNOG00000014808	Srfbp1	98	63.972	ENSBTAG00000014320	SRFBP1	100	63.972	Bos_taurus
ENSRNOG00000014808	Srfbp1	98	66.667	ENSCJAG00000017177	SRFBP1	100	66.667	Callithrix_jacchus
ENSRNOG00000014808	Srfbp1	98	64.516	ENSCAFG00000000512	SRFBP1	100	64.516	Canis_familiaris
ENSRNOG00000014808	Srfbp1	98	64.516	ENSCAFG00020009389	SRFBP1	100	64.516	Canis_lupus_dingo
ENSRNOG00000014808	Srfbp1	95	47.630	ENSTSYG00000006869	-	99	47.630	Carlito_syrichta
ENSRNOG00000014808	Srfbp1	95	64.953	ENSTSYG00000008630	-	98	64.486	Carlito_syrichta
ENSRNOG00000014808	Srfbp1	98	64.220	ENSCPOG00000004695	SRFBP1	100	63.991	Cavia_porcellus
ENSRNOG00000014808	Srfbp1	98	65.517	ENSCCAG00000032237	-	100	65.517	Cebus_capucinus
ENSRNOG00000014808	Srfbp1	98	67.361	ENSCATG00000040904	SRFBP1	100	67.361	Cercocebus_atys
ENSRNOG00000014808	Srfbp1	98	64.368	ENSCLAG00000003630	SRFBP1	100	64.138	Chinchilla_lanigera
ENSRNOG00000014808	Srfbp1	98	63.972	ENSCSAG00000014636	SRFBP1	100	66.359	Chlorocebus_sabaeus
ENSRNOG00000014808	Srfbp1	98	66.435	ENSCANG00000041298	SRFBP1	100	66.667	Colobus_angolensis_palliatus
ENSRNOG00000014808	Srfbp1	100	77.427	ENSCGRG00001000718	Srfbp1	100	77.427	Cricetulus_griseus_chok1gshd
ENSRNOG00000014808	Srfbp1	94	76.555	ENSCGRG00000010837	Srfbp1	100	76.555	Cricetulus_griseus_crigri
ENSRNOG00000014808	Srfbp1	69	80.000	ENSCSEG00000011789	-	99	40.535	Cynoglossus_semilaevis
ENSRNOG00000014808	Srfbp1	100	39.198	ENSCVAG00000013010	-	99	36.830	Cyprinodon_variegatus
ENSRNOG00000014808	Srfbp1	69	54.286	ENSDARG00000075323	srfbp1	58	55.906	Danio_rerio
ENSRNOG00000014808	Srfbp1	78	58.092	ENSDNOG00000017733	SRFBP1	100	58.092	Dasypus_novemcinctus
ENSRNOG00000014808	Srfbp1	77	51.895	ENSETEG00000012408	SRFBP1	100	51.163	Echinops_telfairi
ENSRNOG00000014808	Srfbp1	70	45.385	ENSEBUG00000007806	SRFBP1	57	45.968	Eptatretus_burgeri
ENSRNOG00000014808	Srfbp1	98	66.975	ENSEASG00005012421	SRFBP1	100	66.975	Equus_asinus_asinus
ENSRNOG00000014808	Srfbp1	98	66.282	ENSECAG00000015330	SRFBP1	100	66.282	Equus_caballus
ENSRNOG00000014808	Srfbp1	98	56.751	ENSEEUG00000011514	SRFBP1	100	57.437	Erinaceus_europaeus
ENSRNOG00000014808	Srfbp1	97	36.617	ENSELUG00000018381	-	97	36.933	Esox_lucius
ENSRNOG00000014808	Srfbp1	98	66.282	ENSFCAG00000035118	SRFBP1	100	66.513	Felis_catus
ENSRNOG00000014808	Srfbp1	94	41.002	ENSFALG00000007595	SRFBP1	100	41.686	Ficedula_albicollis
ENSRNOG00000014808	Srfbp1	98	63.470	ENSFDAG00000005102	SRFBP1	100	63.073	Fukomys_damarensis
ENSRNOG00000014808	Srfbp1	96	35.600	ENSFHEG00000000477	-	59	56.303	Fundulus_heteroclitus
ENSRNOG00000014808	Srfbp1	68	56.034	ENSGMOG00000012729	-	85	34.932	Gadus_morhua
ENSRNOG00000014808	Srfbp1	96	42.247	ENSGALG00000005316	SRFBP1	99	42.022	Gallus_gallus
ENSRNOG00000014808	Srfbp1	99	39.013	ENSGACG00000009055	-	85	38.359	Gasterosteus_aculeatus
ENSRNOG00000014808	Srfbp1	94	43.409	ENSGAGG00000024915	SRFBP1	99	43.052	Gopherus_agassizii
ENSRNOG00000014808	Srfbp1	98	67.361	ENSGGOG00000007725	SRFBP1	100	67.361	Gorilla_gorilla
ENSRNOG00000014808	Srfbp1	99	63.657	ENSSTOG00000029184	SRFBP1	99	63.657	Ictidomys_tridecemlineatus
ENSRNOG00000014808	Srfbp1	94	61.871	ENSJJAG00000013229	Srfbp1	100	63.070	Jaculus_jaculus
ENSRNOG00000014808	Srfbp1	75	57.447	ENSLBEG00000013924	-	95	36.364	Labrus_bergylta
ENSRNOG00000014808	Srfbp1	77	36.885	ENSLACG00000004456	SRFBP1	100	37.432	Latimeria_chalumnae
ENSRNOG00000014808	Srfbp1	99	62.754	ENSLAFG00000015303	SRFBP1	100	62.302	Loxodonta_africana
ENSRNOG00000014808	Srfbp1	98	67.130	ENSMFAG00000031263	SRFBP1	100	67.130	Macaca_fascicularis
ENSRNOG00000014808	Srfbp1	98	67.361	ENSMMUG00000021009	SRFBP1	100	67.361	Macaca_mulatta
ENSRNOG00000014808	Srfbp1	98	67.130	ENSMNEG00000040870	SRFBP1	100	67.130	Macaca_nemestrina
ENSRNOG00000014808	Srfbp1	96	36.779	ENSMZEG00005000432	-	87	36.800	Maylandia_zebra
ENSRNOG00000014808	Srfbp1	95	76.905	ENSMAUG00000009431	Srfbp1	95	76.905	Mesocricetus_auratus
ENSRNOG00000014808	Srfbp1	98	67.277	ENSMICG00000042923	SRFBP1	100	67.277	Microcebus_murinus
ENSRNOG00000014808	Srfbp1	100	76.975	ENSMOCG00000006206	Srfbp1	100	76.975	Microtus_ochrogaster
ENSRNOG00000014808	Srfbp1	98	53.759	ENSMODG00000013487	-	99	54.214	Monodelphis_domestica
ENSRNOG00000014808	Srfbp1	100	82.579	MGP_CAROLIEiJ_G0022271	Srfbp1	100	82.579	Mus_caroli
ENSRNOG00000014808	Srfbp1	100	80.769	ENSMUSG00000024528	Srfbp1	100	80.769	Mus_musculus
ENSRNOG00000014808	Srfbp1	100	82.619	MGP_PahariEiJ_G0019004	Srfbp1	100	82.619	Mus_pahari
ENSRNOG00000014808	Srfbp1	100	80.769	MGP_SPRETEiJ_G0023184	Srfbp1	100	80.769	Mus_spretus
ENSRNOG00000014808	Srfbp1	94	63.789	ENSMPUG00000013031	SRFBP1	100	64.303	Mustela_putorius_furo
ENSRNOG00000014808	Srfbp1	95	65.083	ENSMLUG00000009984	SRFBP1	99	64.471	Myotis_lucifugus
ENSRNOG00000014808	Srfbp1	99	64.237	ENSNGAG00000013229	Srfbp1	97	65.558	Nannospalax_galili
ENSRNOG00000014808	Srfbp1	98	66.513	ENSNLEG00000011949	SRFBP1	100	66.513	Nomascus_leucogenys
ENSRNOG00000014808	Srfbp1	64	64.423	ENSOPRG00000003881	-	80	64.423	Ochotona_princeps
ENSRNOG00000014808	Srfbp1	94	61.429	ENSODEG00000007258	SRFBP1	100	60.952	Octodon_degus
ENSRNOG00000014808	Srfbp1	84	45.953	ENSOANG00000010042	-	99	45.953	Ornithorhynchus_anatinus
ENSRNOG00000014808	Srfbp1	99	66.063	ENSOCUG00000009556	SRFBP1	99	66.063	Oryctolagus_cuniculus
ENSRNOG00000014808	Srfbp1	98	64.120	ENSOGAG00000032423	SRFBP1	100	63.134	Otolemur_garnettii
ENSRNOG00000014808	Srfbp1	98	66.898	ENSPPAG00000035848	SRFBP1	100	66.898	Pan_paniscus
ENSRNOG00000014808	Srfbp1	98	66.744	ENSPPRG00000001695	SRFBP1	100	66.744	Panthera_pardus
ENSRNOG00000014808	Srfbp1	98	66.513	ENSPTIG00000012305	SRFBP1	100	66.513	Panthera_tigris_altaica
ENSRNOG00000014808	Srfbp1	98	67.130	ENSPTRG00000017172	SRFBP1	100	67.130	Pan_troglodytes
ENSRNOG00000014808	Srfbp1	98	66.667	ENSPANG00000003799	SRFBP1	100	65.011	Papio_anubis
ENSRNOG00000014808	Srfbp1	70	51.111	ENSPKIG00000024291	-	69	54.098	Paramormyrops_kingsleyae
ENSRNOG00000014808	Srfbp1	98	44.098	ENSPSIG00000010650	SRFBP1	99	43.046	Pelodiscus_sinensis
ENSRNOG00000014808	Srfbp1	98	56.064	ENSPCIG00000028532	SRFBP1	94	55.606	Phascolarctos_cinereus
ENSRNOG00000014808	Srfbp1	76	68.293	ENSPMEG00000020184	-	66	51.825	Poecilia_mexicana
ENSRNOG00000014808	Srfbp1	96	40.920	ENSPREG00000017248	-	98	40.961	Poecilia_reticulata
ENSRNOG00000014808	Srfbp1	98	67.130	ENSPPYG00000015714	SRFBP1	100	67.130	Pongo_abelii
ENSRNOG00000014808	Srfbp1	98	68.664	ENSPCOG00000027331	SRFBP1	100	68.664	Propithecus_coquereli
ENSRNOG00000014808	Srfbp1	54	81.944	ENSPVAG00000017512	-	52	87.597	Pteropus_vampyrus
ENSRNOG00000014808	Srfbp1	96	39.773	ENSPNYG00000010355	-	98	38.074	Pundamilia_nyererei
ENSRNOG00000014808	Srfbp1	71	53.472	ENSPNAG00000029666	srfbp1	90	55.385	Pygocentrus_nattereri
ENSRNOG00000014808	Srfbp1	95	63.033	ENSRBIG00000031064	SRFBP1	99	63.033	Rhinopithecus_bieti
ENSRNOG00000014808	Srfbp1	98	66.898	ENSRROG00000026932	SRFBP1	100	66.898	Rhinopithecus_roxellana
ENSRNOG00000014808	Srfbp1	98	66.513	ENSSBOG00000015464	-	99	66.513	Saimiri_boliviensis_boliviensis
ENSRNOG00000014808	Srfbp1	98	55.455	ENSSHAG00000016003	SRFBP1	99	55.000	Sarcophilus_harrisii
ENSRNOG00000014808	Srfbp1	96	37.037	ENSSFOG00015001274	srfbp1	99	36.831	Scleropages_formosus
ENSRNOG00000014808	Srfbp1	99	35.755	ENSSMAG00000020630	-	60	54.412	Scophthalmus_maximus
ENSRNOG00000014808	Srfbp1	98	63.594	ENSSARG00000010669	SRFBP1	100	63.616	Sorex_araneus
ENSRNOG00000014808	Srfbp1	95	46.009	ENSSPUG00000009204	SRFBP1	99	46.009	Sphenodon_punctatus
ENSRNOG00000014808	Srfbp1	99	65.315	ENSSSCG00000022656	SRFBP1	100	65.747	Sus_scrofa
ENSRNOG00000014808	Srfbp1	97	40.632	ENSTNIG00000009267	-	98	40.766	Tetraodon_nigroviridis
ENSRNOG00000014808	Srfbp1	77	69.014	ENSTTRG00000007726	SRFBP1	81	69.014	Tursiops_truncatus
ENSRNOG00000014808	Srfbp1	94	67.225	ENSUAMG00000016707	SRFBP1	100	67.225	Ursus_americanus
ENSRNOG00000014808	Srfbp1	95	65.714	ENSUMAG00000018340	SRFBP1	100	62.736	Ursus_maritimus
ENSRNOG00000014808	Srfbp1	98	65.972	ENSVPAG00000005714	SRFBP1	100	66.051	Vicugna_pacos
ENSRNOG00000014808	Srfbp1	98	63.825	ENSVVUG00000019178	SRFBP1	100	63.825	Vulpes_vulpes
ENSRNOG00000014808	Srfbp1	95	44.898	ENSXETG00000004681	srfbp1	97	43.991	Xenopus_tropicalis
ENSRNOG00000014808	Srfbp1	76	57.778	ENSXCOG00000003410	-	72	54.198	Xiphophorus_couchianus
ENSRNOG00000014808	Srfbp1	76	65.000	ENSXMAG00000026251	-	65	52.555	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0030490	maturation of SSU-rRNA	21873635.	IBA	Process
GO:0030686	90S preribosome	21873635.	IBA	Component
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component