EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000014946 (Gene tree)
Gene ID: -
Gene Symbol: AABR07005588.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 3262 bases
Position: chr1:189457583-189460844
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000020077	THUMP	PF02926.17	7.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000020077	AABR07005588.1-201	2266	-	ENSRNOP00000020077	219 (aa)	-	F7FA68

Gene Model

Click here to download ENSRNOG00000014946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000014946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000014946	AABR07005588.1	100	79.545	ENSG00000066654	THUMPD1	62	79.545	Homo_sapiens
ENSRNOG00000014946	AABR07005588.1	100	80.357	ENSAMEG00000006257	THUMPD1	62	80.357	Ailuropoda_melanoleuca
ENSRNOG00000014946	AABR07005588.1	63	82.482	ENSACAG00000022881	-	75	82.482	Anolis_carolinensis
ENSRNOG00000014946	AABR07005588.1	100	78.636	ENSANAG00000026882	-	62	78.636	Aotus_nancymaae
ENSRNOG00000014946	AABR07005588.1	100	62.273	ENSANAG00000027311	-	60	62.273	Aotus_nancymaae
ENSRNOG00000014946	AABR07005588.1	100	57.273	ENSANAG00000027040	-	57	57.273	Aotus_nancymaae
ENSRNOG00000014946	AABR07005588.1	62	68.889	ENSACLG00000004830	thumpd1	59	53.807	Astatotilapia_calliptera
ENSRNOG00000014946	AABR07005588.1	95	53.365	ENSAMXG00000012356	thumpd1	61	53.365	Astyanax_mexicanus
ENSRNOG00000014946	AABR07005588.1	99	81.166	ENSBTAG00000047673	THUMPD1	62	81.166	Bos_taurus
ENSRNOG00000014946	AABR07005588.1	100	78.182	ENSCJAG00000009499	THUMPD1	62	78.182	Callithrix_jacchus
ENSRNOG00000014946	AABR07005588.1	100	79.911	ENSCAFG00000017985	THUMPD1	62	79.911	Canis_familiaris
ENSRNOG00000014946	AABR07005588.1	100	79.911	ENSCAFG00020021861	THUMPD1	62	79.911	Canis_lupus_dingo
ENSRNOG00000014946	AABR07005588.1	99	80.717	ENSCHIG00000010134	THUMPD1	62	80.717	Capra_hircus
ENSRNOG00000014946	AABR07005588.1	100	80.543	ENSTSYG00000011537	THUMPD1	62	80.543	Carlito_syrichta
ENSRNOG00000014946	AABR07005588.1	70	91.613	ENSCAPG00000015086	-	88	91.613	Cavia_aperea
ENSRNOG00000014946	AABR07005588.1	100	79.638	ENSCPOG00000008919	-	62	79.638	Cavia_porcellus
ENSRNOG00000014946	AABR07005588.1	100	79.638	ENSCPOG00000023684	-	62	79.638	Cavia_porcellus
ENSRNOG00000014946	AABR07005588.1	100	72.727	ENSCCAG00000019379	-	52	72.727	Cebus_capucinus
ENSRNOG00000014946	AABR07005588.1	100	77.727	ENSCCAG00000030205	THUMPD1	62	77.727	Cebus_capucinus
ENSRNOG00000014946	AABR07005588.1	99	66.071	ENSCATG00000020844	-	62	66.071	Cercocebus_atys
ENSRNOG00000014946	AABR07005588.1	100	79.091	ENSCATG00000040309	THUMPD1	62	79.091	Cercocebus_atys
ENSRNOG00000014946	AABR07005588.1	100	78.636	ENSCLAG00000016508	THUMPD1	62	78.636	Chinchilla_lanigera
ENSRNOG00000014946	AABR07005588.1	99	78.995	ENSCSAG00000007610	THUMPD1	62	78.995	Chlorocebus_sabaeus
ENSRNOG00000014946	AABR07005588.1	100	79.018	ENSCHOG00000005587	THUMPD1	63	79.018	Choloepus_hoffmanni
ENSRNOG00000014946	AABR07005588.1	100	69.091	ENSCANG00000035822	-	71	69.091	Colobus_angolensis_palliatus
ENSRNOG00000014946	AABR07005588.1	100	79.091	ENSCANG00000038770	THUMPD1	73	79.091	Colobus_angolensis_palliatus
ENSRNOG00000014946	AABR07005588.1	100	88.128	ENSCGRG00001014829	Thumpd1	62	88.128	Cricetulus_griseus_chok1gshd
ENSRNOG00000014946	AABR07005588.1	100	88.128	ENSCGRG00000000060	Thumpd1	62	88.128	Cricetulus_griseus_crigri
ENSRNOG00000014946	AABR07005588.1	70	62.179	ENSCSEG00000002041	thumpd1	50	62.179	Cynoglossus_semilaevis
ENSRNOG00000014946	AABR07005588.1	84	59.563	ENSCVAG00000014960	thumpd1	50	59.563	Cyprinodon_variegatus
ENSRNOG00000014946	AABR07005588.1	94	49.048	ENSDARG00000100264	thumpd1	59	48.571	Danio_rerio
ENSRNOG00000014946	AABR07005588.1	100	80.804	ENSDNOG00000043510	THUMPD1	63	80.804	Dasypus_novemcinctus
ENSRNOG00000014946	AABR07005588.1	100	76.923	ENSDORG00000028216	Thumpd1	62	76.923	Dipodomys_ordii
ENSRNOG00000014946	AABR07005588.1	82	32.597	FBgn0035532	CG15014	51	32.597	Drosophila_melanogaster
ENSRNOG00000014946	AABR07005588.1	88	75.635	ENSEASG00005017428	-	100	75.635	Equus_asinus_asinus
ENSRNOG00000014946	AABR07005588.1	100	77.679	ENSECAG00000005354	THUMPD1	63	77.679	Equus_caballus
ENSRNOG00000014946	AABR07005588.1	100	75.758	ENSEEUG00000011256	THUMPD1	55	76.623	Erinaceus_europaeus
ENSRNOG00000014946	AABR07005588.1	100	80.357	ENSFCAG00000039296	THUMPD1	63	80.357	Felis_catus
ENSRNOG00000014946	AABR07005588.1	63	87.050	ENSFALG00000014029	THUMPD1	50	87.050	Ficedula_albicollis
ENSRNOG00000014946	AABR07005588.1	62	69.630	ENSFHEG00000013319	thumpd1	59	52.381	Fundulus_heteroclitus
ENSRNOG00000014946	AABR07005588.1	63	87.770	ENSGALG00000031384	-	63	87.770	Gallus_gallus
ENSRNOG00000014946	AABR07005588.1	90	54.545	ENSGAFG00000011000	thumpd1	60	54.545	Gambusia_affinis
ENSRNOG00000014946	AABR07005588.1	82	68.280	ENSGAGG00000008225	THUMPD1	58	68.280	Gopherus_agassizii
ENSRNOG00000014946	AABR07005588.1	99	58.257	ENSGGOG00000043232	-	63	58.257	Gorilla_gorilla
ENSRNOG00000014946	AABR07005588.1	100	79.545	ENSGGOG00000005231	-	50	79.545	Gorilla_gorilla
ENSRNOG00000014946	AABR07005588.1	62	68.889	ENSHBUG00000017996	thumpd1	59	53.807	Haplochromis_burtoni
ENSRNOG00000014946	AABR07005588.1	100	80.995	ENSHGLG00000011001	-	62	80.995	Heterocephalus_glaber_female
ENSRNOG00000014946	AABR07005588.1	97	72.430	ENSHGLG00000000952	-	100	72.430	Heterocephalus_glaber_female
ENSRNOG00000014946	AABR07005588.1	100	81.448	ENSHGLG00100016023	THUMPD1	62	81.448	Heterocephalus_glaber_male
ENSRNOG00000014946	AABR07005588.1	97	72.430	ENSHGLG00100010577	-	100	72.430	Heterocephalus_glaber_male
ENSRNOG00000014946	AABR07005588.1	100	81.364	ENSSTOG00000007011	THUMPD1	62	81.364	Ictidomys_tridecemlineatus
ENSRNOG00000014946	AABR07005588.1	100	80.455	ENSJJAG00000004295	-	62	80.455	Jaculus_jaculus
ENSRNOG00000014946	AABR07005588.1	63	59.124	ENSKMAG00000009545	thumpd1	55	45.175	Kryptolebias_marmoratus
ENSRNOG00000014946	AABR07005588.1	96	59.641	ENSLACG00000005833	THUMPD1	58	59.641	Latimeria_chalumnae
ENSRNOG00000014946	AABR07005588.1	92	55.941	ENSLOCG00000000854	thumpd1	58	55.941	Lepisosteus_oculatus
ENSRNOG00000014946	AABR07005588.1	100	79.911	ENSLAFG00000025838	THUMPD1	63	79.911	Loxodonta_africana
ENSRNOG00000014946	AABR07005588.1	100	79.091	ENSMFAG00000036996	THUMPD1	62	79.091	Macaca_fascicularis
ENSRNOG00000014946	AABR07005588.1	100	65.022	ENSMFAG00000041474	-	70	65.022	Macaca_fascicularis
ENSRNOG00000014946	AABR07005588.1	100	79.091	ENSMMUG00000004225	THUMPD1	62	79.091	Macaca_mulatta
ENSRNOG00000014946	AABR07005588.1	100	64.574	ENSMMUG00000038414	-	70	64.574	Macaca_mulatta
ENSRNOG00000014946	AABR07005588.1	100	79.091	ENSMNEG00000020726	THUMPD1	62	79.091	Macaca_nemestrina
ENSRNOG00000014946	AABR07005588.1	100	64.574	ENSMNEG00000038856	-	70	64.574	Macaca_nemestrina
ENSRNOG00000014946	AABR07005588.1	99	65.315	ENSMLEG00000030012	-	70	65.315	Mandrillus_leucophaeus
ENSRNOG00000014946	AABR07005588.1	100	79.091	ENSMLEG00000036436	THUMPD1	62	79.091	Mandrillus_leucophaeus
ENSRNOG00000014946	AABR07005588.1	62	68.889	ENSMZEG00005013693	thumpd1	59	53.807	Maylandia_zebra
ENSRNOG00000014946	AABR07005588.1	66	84.138	ENSMGAG00000010340	THUMPD1	70	84.138	Meleagris_gallopavo
ENSRNOG00000014946	AABR07005588.1	100	89.041	ENSMAUG00000013306	Thumpd1	62	89.041	Mesocricetus_auratus
ENSRNOG00000014946	AABR07005588.1	99	70.320	ENSMICG00000030865	-	63	70.320	Microcebus_murinus
ENSRNOG00000014946	AABR07005588.1	100	83.182	ENSMICG00000038483	-	62	83.182	Microcebus_murinus
ENSRNOG00000014946	AABR07005588.1	100	89.041	ENSMOCG00000003447	Thumpd1	62	89.041	Microtus_ochrogaster
ENSRNOG00000014946	AABR07005588.1	99	69.298	ENSMODG00000006971	-	62	69.298	Monodelphis_domestica
ENSRNOG00000014946	AABR07005588.1	99	69.737	ENSMODG00000024776	-	62	69.737	Monodelphis_domestica
ENSRNOG00000014946	AABR07005588.1	100	89.041	MGP_CAROLIEiJ_G0030382	Thumpd1	62	89.041	Mus_caroli
ENSRNOG00000014946	AABR07005588.1	100	90.868	ENSMUSG00000030942	Thumpd1	62	90.868	Mus_musculus
ENSRNOG00000014946	AABR07005588.1	100	89.041	MGP_PahariEiJ_G0013593	Thumpd1	61	89.041	Mus_pahari
ENSRNOG00000014946	AABR07005588.1	99	78.924	ENSMLUG00000010547	THUMPD1	63	78.924	Myotis_lucifugus
ENSRNOG00000014946	AABR07005588.1	99	84.932	ENSNGAG00000018643	Thumpd1	62	84.932	Nannospalax_galili
ENSRNOG00000014946	AABR07005588.1	62	68.889	ENSNBRG00000006987	thumpd1	55	53.535	Neolamprologus_brichardi
ENSRNOG00000014946	AABR07005588.1	100	79.545	ENSNLEG00000012369	THUMPD1	62	79.545	Nomascus_leucogenys
ENSRNOG00000014946	AABR07005588.1	99	78.899	ENSOPRG00000011342	THUMPD1	53	78.899	Ochotona_princeps
ENSRNOG00000014946	AABR07005588.1	100	78.733	ENSODEG00000012360	THUMPD1	63	78.733	Octodon_degus
ENSRNOG00000014946	AABR07005588.1	62	68.148	ENSONIG00000000146	thumpd1	52	63.333	Oreochromis_niloticus
ENSRNOG00000014946	AABR07005588.1	99	65.217	ENSOANG00000014297	THUMPD1	65	65.217	Ornithorhynchus_anatinus
ENSRNOG00000014946	AABR07005588.1	100	76.364	ENSOCUG00000025354	-	100	76.364	Oryctolagus_cuniculus
ENSRNOG00000014946	AABR07005588.1	100	78.636	ENSOCUG00000009895	-	62	78.636	Oryctolagus_cuniculus
ENSRNOG00000014946	AABR07005588.1	100	78.636	ENSOGAG00000026723	THUMPD1	62	78.636	Otolemur_garnettii
ENSRNOG00000014946	AABR07005588.1	99	80.717	ENSOARG00000013107	THUMPD1	62	80.717	Ovis_aries
ENSRNOG00000014946	AABR07005588.1	99	64.384	ENSPPAG00000001653	-	66	64.384	Pan_paniscus
ENSRNOG00000014946	AABR07005588.1	100	78.636	ENSPPAG00000033818	-	50	78.636	Pan_paniscus
ENSRNOG00000014946	AABR07005588.1	100	82.143	ENSPPRG00000014118	-	63	82.143	Panthera_pardus
ENSRNOG00000014946	AABR07005588.1	100	80.804	ENSPTIG00000013856	-	63	80.804	Panthera_tigris_altaica
ENSRNOG00000014946	AABR07005588.1	99	63.927	ENSPTRG00000046073	-	65	63.927	Pan_troglodytes
ENSRNOG00000014946	AABR07005588.1	100	78.182	ENSPTRG00000007848	THUMPD1	50	78.182	Pan_troglodytes
ENSRNOG00000014946	AABR07005588.1	100	79.091	ENSPANG00000025507	THUMPD1	62	79.091	Papio_anubis
ENSRNOG00000014946	AABR07005588.1	99	66.216	ENSPANG00000034881	-	70	66.216	Papio_anubis
ENSRNOG00000014946	AABR07005588.1	100	69.406	ENSPEMG00000002608	-	93	69.406	Peromyscus_maniculatus_bairdii
ENSRNOG00000014946	AABR07005588.1	78	51.176	ENSPMAG00000001389	thumpd1	83	44.796	Petromyzon_marinus
ENSRNOG00000014946	AABR07005588.1	84	56.842	ENSPFOG00000012649	thumpd1	56	58.889	Poecilia_formosa
ENSRNOG00000014946	AABR07005588.1	84	56.316	ENSPLAG00000000137	thumpd1	59	56.316	Poecilia_latipinna
ENSRNOG00000014946	AABR07005588.1	84	57.368	ENSPMEG00000007750	thumpd1	56	59.444	Poecilia_mexicana
ENSRNOG00000014946	AABR07005588.1	100	78.182	ENSPPYG00000007160	-	79	78.182	Pongo_abelii
ENSRNOG00000014946	AABR07005588.1	100	75.111	ENSPCAG00000001534	THUMPD1	80	75.111	Procavia_capensis
ENSRNOG00000014946	AABR07005588.1	100	84.091	ENSPCOG00000024663	THUMPD1	62	84.091	Propithecus_coquereli
ENSRNOG00000014946	AABR07005588.1	99	71.875	ENSPVAG00000003286	-	99	71.875	Pteropus_vampyrus
ENSRNOG00000014946	AABR07005588.1	100	72.124	ENSPVAG00000005659	-	63	72.124	Pteropus_vampyrus
ENSRNOG00000014946	AABR07005588.1	62	68.889	ENSPNYG00000007061	thumpd1	60	52.153	Pundamilia_nyererei
ENSRNOG00000014946	AABR07005588.1	93	55.392	ENSPNAG00000024872	thumpd1	59	55.392	Pygocentrus_nattereri
ENSRNOG00000014946	AABR07005588.1	100	78.636	ENSRBIG00000040752	THUMPD1	62	78.636	Rhinopithecus_bieti
ENSRNOG00000014946	AABR07005588.1	100	67.273	ENSRBIG00000040136	-	70	67.273	Rhinopithecus_bieti
ENSRNOG00000014946	AABR07005588.1	100	78.636	ENSRROG00000042189	THUMPD1	62	78.636	Rhinopithecus_roxellana
ENSRNOG00000014946	AABR07005588.1	100	67.273	ENSRROG00000045699	-	70	67.273	Rhinopithecus_roxellana
ENSRNOG00000014946	AABR07005588.1	100	78.182	ENSSBOG00000034246	THUMPD1	62	78.182	Saimiri_boliviensis_boliviensis
ENSRNOG00000014946	AABR07005588.1	99	66.812	ENSSHAG00000003853	THUMPD1	62	66.812	Sarcophilus_harrisii
ENSRNOG00000014946	AABR07005588.1	63	71.014	ENSSFOG00015007512	thumpd1	58	57.754	Scleropages_formosus
ENSRNOG00000014946	AABR07005588.1	84	56.250	ENSSMAG00000000723	thumpd1	58	56.250	Scophthalmus_maximus
ENSRNOG00000014946	AABR07005588.1	84	55.208	ENSSDUG00000014502	thumpd1	59	55.208	Seriola_dumerili
ENSRNOG00000014946	AABR07005588.1	84	55.729	ENSSLDG00000007694	thumpd1	59	55.729	Seriola_lalandi_dorsalis
ENSRNOG00000014946	AABR07005588.1	63	89.209	ENSSPUG00000005096	THUMPD1	70	88.889	Sphenodon_punctatus
ENSRNOG00000014946	AABR07005588.1	90	55.051	ENSSPAG00000006993	thumpd1	60	55.051	Stegastes_partitus
ENSRNOG00000014946	AABR07005588.1	100	80.357	ENSSSCG00000024748	THUMPD1	62	80.357	Sus_scrofa
ENSRNOG00000014946	AABR07005588.1	66	83.448	ENSTGUG00000009247	THUMPD1	53	83.448	Taeniopygia_guttata
ENSRNOG00000014946	AABR07005588.1	75	57.692	ENSTRUG00000015656	thumpd1	57	57.692	Takifugu_rubripes
ENSRNOG00000014946	AABR07005588.1	75	61.818	ENSTNIG00000001584	thumpd1	52	61.818	Tetraodon_nigroviridis
ENSRNOG00000014946	AABR07005588.1	100	80.909	ENSTBEG00000005252	THUMPD1	55	80.909	Tupaia_belangeri
ENSRNOG00000014946	AABR07005588.1	100	80.357	ENSTTRG00000016435	THUMPD1	63	80.357	Tursiops_truncatus
ENSRNOG00000014946	AABR07005588.1	100	70.982	ENSUAMG00000005779	-	100	70.982	Ursus_americanus
ENSRNOG00000014946	AABR07005588.1	100	77.679	ENSVPAG00000003422	THUMPD1	62	77.679	Vicugna_pacos
ENSRNOG00000014946	AABR07005588.1	100	79.464	ENSVVUG00000023241	THUMPD1	62	79.464	Vulpes_vulpes
ENSRNOG00000014946	AABR07005588.1	70	75.974	ENSXETG00000005539	thumpd1	53	75.974	Xenopus_tropicalis
ENSRNOG00000014946	AABR07005588.1	53	69.231	ENSXCOG00000016003	thumpd1	97	51.256	Xiphophorus_couchianus
ENSRNOG00000014946	AABR07005588.1	62	70.370	ENSXMAG00000026052	thumpd1	60	54.545	Xiphophorus_maculatus