EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000015140 (Gene tree)
Gene ID: 499697
Gene Symbol: Trmt13
Alias: Ccdc76|MGC124992
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 13578 bases
Position: chr2:219615420-219628997
Accession: 1565211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000062314	TRM13	PF05206.14	3.2e-93	1	1
ENSRNOP00000062314	zf-U11-48K	PF05253.12	2.8e-09	1	1
ENSRNOP00000062314	zf-TRM13_CCCH	PF11722.8	3.1e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000064484	-	2216	XM_008761469	ENSRNOP00000062314	495 (aa)	-	B2GV29

Gene Model

Click here to download ENSRNOG00000015140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000015140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000015140	Trmt13	96	85.954	ENSG00000122435	TRMT13	99	85.954	Homo_sapiens
ENSRNOG00000015140	Trmt13	93	48.207	ENSAPOG00000015131	trmt13	99	48.503	Acanthochromis_polyacanthus
ENSRNOG00000015140	Trmt13	96	84.310	ENSAMEG00000008917	TRMT13	99	84.310	Ailuropoda_melanoleuca
ENSRNOG00000015140	Trmt13	94	50.826	ENSACIG00000005804	trmt13	95	50.422	Amphilophus_citrinellus
ENSRNOG00000015140	Trmt13	93	48.016	ENSAOCG00000023585	trmt13	99	48.016	Amphiprion_ocellaris
ENSRNOG00000015140	Trmt13	93	47.929	ENSAPEG00000004025	trmt13	99	47.929	Amphiprion_percula
ENSRNOG00000015140	Trmt13	95	51.139	ENSATEG00000006597	trmt13	98	51.139	Anabas_testudineus
ENSRNOG00000015140	Trmt13	85	65.962	ENSAPLG00000014924	TRMT13	99	65.962	Anas_platyrhynchos
ENSRNOG00000015140	Trmt13	92	63.755	ENSACAG00000003498	TRMT13	97	63.755	Anolis_carolinensis
ENSRNOG00000015140	Trmt13	96	86.373	ENSANAG00000019525	TRMT13	99	87.037	Aotus_nancymaae
ENSRNOG00000015140	Trmt13	92	53.780	ENSACLG00000020018	trmt13	98	53.780	Astatotilapia_calliptera
ENSRNOG00000015140	Trmt13	93	54.352	ENSAMXG00000017963	trmt13	98	55.485	Astyanax_mexicanus
ENSRNOG00000015140	Trmt13	96	84.310	ENSBTAG00000015781	TRMT13	99	84.310	Bos_taurus
ENSRNOG00000015140	Trmt13	96	84.696	ENSCJAG00000000200	TRMT13	98	87.037	Callithrix_jacchus
ENSRNOG00000015140	Trmt13	63	85.577	ENSCAFG00000020021	TRMT13	98	85.577	Canis_familiaris
ENSRNOG00000015140	Trmt13	55	87.912	ENSCAFG00020011572	TRMT13	95	87.273	Canis_lupus_dingo
ENSRNOG00000015140	Trmt13	96	84.310	ENSCHIG00000015395	TRMT13	99	84.310	Capra_hircus
ENSRNOG00000015140	Trmt13	95	79.618	ENSTSYG00000010811	TRMT13	98	85.859	Carlito_syrichta
ENSRNOG00000015140	Trmt13	73	65.565	ENSCAPG00000009085	TRMT13	100	66.116	Cavia_aperea
ENSRNOG00000015140	Trmt13	96	84.937	ENSCPOG00000000694	TRMT13	99	84.937	Cavia_porcellus
ENSRNOG00000015140	Trmt13	96	85.954	ENSCCAG00000023772	TRMT13	99	86.111	Cebus_capucinus
ENSRNOG00000015140	Trmt13	96	86.192	ENSCATG00000033556	TRMT13	99	86.192	Cercocebus_atys
ENSRNOG00000015140	Trmt13	85	83.491	ENSCLAG00000008220	TRMT13	99	83.255	Chinchilla_lanigera
ENSRNOG00000015140	Trmt13	96	86.402	ENSCSAG00000001506	TRMT13	99	86.402	Chlorocebus_sabaeus
ENSRNOG00000015140	Trmt13	96	68.211	ENSCPBG00000026671	TRMT13	99	68.211	Chrysemys_picta_bellii
ENSRNOG00000015140	Trmt13	96	86.192	ENSCANG00000034659	TRMT13	100	85.321	Colobus_angolensis_palliatus
ENSRNOG00000015140	Trmt13	96	88.727	ENSCGRG00001021601	Trmt13	99	88.727	Cricetulus_griseus_chok1gshd
ENSRNOG00000015140	Trmt13	51	87.451	ENSCGRG00000000093	-	98	87.451	Cricetulus_griseus_crigri
ENSRNOG00000015140	Trmt13	93	49.130	ENSCSEG00000000591	trmt13	97	49.130	Cynoglossus_semilaevis
ENSRNOG00000015140	Trmt13	93	49.275	ENSCVAG00000017342	trmt13	94	50.311	Cyprinodon_variegatus
ENSRNOG00000015140	Trmt13	92	57.609	ENSDARG00000102846	trmt13	96	57.609	Danio_rerio
ENSRNOG00000015140	Trmt13	55	85.145	ENSDNOG00000001710	TRMT13	84	85.145	Dasypus_novemcinctus
ENSRNOG00000015140	Trmt13	96	83.613	ENSDORG00000015808	Trmt13	99	83.613	Dipodomys_ordii
ENSRNOG00000015140	Trmt13	94	32.091	FBgn0037435	CG18048	96	32.091	Drosophila_melanogaster
ENSRNOG00000015140	Trmt13	96	71.608	ENSETEG00000005819	TRMT13	99	71.608	Echinops_telfairi
ENSRNOG00000015140	Trmt13	92	44.872	ENSEBUG00000014444	trmt13	96	44.872	Eptatretus_burgeri
ENSRNOG00000015140	Trmt13	96	86.820	ENSEASG00005015918	TRMT13	99	86.820	Equus_asinus_asinus
ENSRNOG00000015140	Trmt13	96	86.402	ENSECAG00000022626	TRMT13	99	86.402	Equus_caballus
ENSRNOG00000015140	Trmt13	75	77.586	ENSEEUG00000000294	TRMT13	78	77.586	Erinaceus_europaeus
ENSRNOG00000015140	Trmt13	94	55.932	ENSELUG00000003803	trmt13	99	56.568	Esox_lucius
ENSRNOG00000015140	Trmt13	96	85.983	ENSFCAG00000030618	TRMT13	100	87.156	Felis_catus
ENSRNOG00000015140	Trmt13	95	64.043	ENSFALG00000002424	TRMT13	98	64.043	Ficedula_albicollis
ENSRNOG00000015140	Trmt13	97	85.595	ENSFDAG00000006342	TRMT13	99	85.595	Fukomys_damarensis
ENSRNOG00000015140	Trmt13	75	52.865	ENSFHEG00000022954	trmt13	98	52.488	Fundulus_heteroclitus
ENSRNOG00000015140	Trmt13	92	49.339	ENSGMOG00000013223	trmt13	100	49.780	Gadus_morhua
ENSRNOG00000015140	Trmt13	92	64.901	ENSGALG00000005290	TRMT13	96	64.770	Gallus_gallus
ENSRNOG00000015140	Trmt13	73	50.802	ENSGAFG00000001577	trmt13	81	50.802	Gambusia_affinis
ENSRNOG00000015140	Trmt13	94	50.106	ENSGACG00000013428	trmt13	97	51.724	Gasterosteus_aculeatus
ENSRNOG00000015140	Trmt13	96	68.487	ENSGAGG00000023303	TRMT13	99	72.000	Gopherus_agassizii
ENSRNOG00000015140	Trmt13	96	85.744	ENSGGOG00000005616	TRMT13	99	85.744	Gorilla_gorilla
ENSRNOG00000015140	Trmt13	92	53.879	ENSHBUG00000007754	trmt13	98	53.879	Haplochromis_burtoni
ENSRNOG00000015140	Trmt13	97	87.474	ENSHGLG00000002164	TRMT13	99	87.474	Heterocephalus_glaber_female
ENSRNOG00000015140	Trmt13	97	87.474	ENSHGLG00100001618	TRMT13	99	87.474	Heterocephalus_glaber_male
ENSRNOG00000015140	Trmt13	92	47.072	ENSHCOG00000020553	trmt13	96	47.072	Hippocampus_comes
ENSRNOG00000015140	Trmt13	94	56.745	ENSIPUG00000024787	trmt13	99	56.809	Ictalurus_punctatus
ENSRNOG00000015140	Trmt13	96	86.583	ENSSTOG00000013483	TRMT13	99	86.583	Ictidomys_tridecemlineatus
ENSRNOG00000015140	Trmt13	95	85.075	ENSJJAG00000018012	Trmt13	98	85.075	Jaculus_jaculus
ENSRNOG00000015140	Trmt13	62	50.955	ENSKMAG00000007639	trmt13	92	50.955	Kryptolebias_marmoratus
ENSRNOG00000015140	Trmt13	93	50.947	ENSLBEG00000020238	trmt13	99	51.143	Labrus_bergylta
ENSRNOG00000015140	Trmt13	92	62.445	ENSLACG00000013153	TRMT13	99	60.859	Latimeria_chalumnae
ENSRNOG00000015140	Trmt13	93	58.621	ENSLOCG00000000418	trmt13	97	59.395	Lepisosteus_oculatus
ENSRNOG00000015140	Trmt13	75	84.054	ENSLAFG00000002383	TRMT13	100	84.054	Loxodonta_africana
ENSRNOG00000015140	Trmt13	96	85.774	ENSMFAG00000034681	TRMT13	100	85.321	Macaca_fascicularis
ENSRNOG00000015140	Trmt13	96	85.774	ENSMMUG00000004243	TRMT13	100	85.321	Macaca_mulatta
ENSRNOG00000015140	Trmt13	96	85.774	ENSMNEG00000036102	TRMT13	100	85.321	Macaca_nemestrina
ENSRNOG00000015140	Trmt13	96	86.402	ENSMLEG00000034258	TRMT13	99	86.402	Mandrillus_leucophaeus
ENSRNOG00000015140	Trmt13	92	53.118	ENSMAMG00000016597	trmt13	95	53.118	Mastacembelus_armatus
ENSRNOG00000015140	Trmt13	92	53.564	ENSMZEG00005020959	trmt13	98	53.564	Maylandia_zebra
ENSRNOG00000015140	Trmt13	85	65.877	ENSMGAG00000006970	TRMT13	99	65.877	Meleagris_gallopavo
ENSRNOG00000015140	Trmt13	96	87.448	ENSMAUG00000010448	Trmt13	99	87.448	Mesocricetus_auratus
ENSRNOG00000015140	Trmt13	96	86.611	ENSMICG00000005283	TRMT13	100	87.156	Microcebus_murinus
ENSRNOG00000015140	Trmt13	96	87.448	ENSMOCG00000019914	Trmt13	99	87.448	Microtus_ochrogaster
ENSRNOG00000015140	Trmt13	52	50.943	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSRNOG00000015140	Trmt13	96	74.220	ENSMODG00000003646	TRMT13	99	74.220	Monodelphis_domestica
ENSRNOG00000015140	Trmt13	96	50.104	ENSMALG00000020965	trmt13	99	50.104	Monopterus_albus
ENSRNOG00000015140	Trmt13	97	94.375	MGP_CAROLIEiJ_G0025568	Trmt13	99	94.375	Mus_caroli
ENSRNOG00000015140	Trmt13	97	94.583	ENSMUSG00000033439	Trmt13	99	94.583	Mus_musculus
ENSRNOG00000015140	Trmt13	97	94.375	MGP_PahariEiJ_G0027014	Trmt13	99	94.375	Mus_pahari
ENSRNOG00000015140	Trmt13	97	95.000	MGP_SPRETEiJ_G0026518	Trmt13	99	95.000	Mus_spretus
ENSRNOG00000015140	Trmt13	76	82.011	ENSMPUG00000002078	-	99	82.011	Mustela_putorius_furo
ENSRNOG00000015140	Trmt13	95	77.801	ENSMLUG00000002124	TRMT13	98	77.801	Myotis_lucifugus
ENSRNOG00000015140	Trmt13	94	49.257	ENSNBRG00000006783	trmt13	98	49.257	Neolamprologus_brichardi
ENSRNOG00000015140	Trmt13	96	85.954	ENSNLEG00000035917	TRMT13	99	86.111	Nomascus_leucogenys
ENSRNOG00000015140	Trmt13	50	70.968	ENSMEUG00000013346	-	100	70.968	Notamacropus_eugenii
ENSRNOG00000015140	Trmt13	64	89.338	ENSOPRG00000012048	TRMT13	66	89.338	Ochotona_princeps
ENSRNOG00000015140	Trmt13	95	52.058	ENSONIG00000004574	trmt13	98	53.433	Oreochromis_niloticus
ENSRNOG00000015140	Trmt13	87	70.534	ENSOANG00000012057	TRMT13	99	70.534	Ornithorhynchus_anatinus
ENSRNOG00000015140	Trmt13	96	86.583	ENSOCUG00000023095	TRMT13	99	86.583	Oryctolagus_cuniculus
ENSRNOG00000015140	Trmt13	93	48.626	ENSORLG00000003320	trmt13	99	49.041	Oryzias_latipes
ENSRNOG00000015140	Trmt13	92	47.957	ENSORLG00020005972	trmt13	97	47.505	Oryzias_latipes_hni
ENSRNOG00000015140	Trmt13	93	52.778	ENSORLG00015002270	trmt13	99	52.778	Oryzias_latipes_hsok
ENSRNOG00000015140	Trmt13	94	51.050	ENSOMEG00000006724	trmt13	95	52.229	Oryzias_melastigma
ENSRNOG00000015140	Trmt13	100	84.476	ENSOGAG00000005618	TRMT13	100	84.476	Otolemur_garnettii
ENSRNOG00000015140	Trmt13	96	84.310	ENSOARG00000017983	TRMT13	99	84.310	Ovis_aries
ENSRNOG00000015140	Trmt13	96	85.744	ENSPPAG00000043736	TRMT13	99	85.744	Pan_paniscus
ENSRNOG00000015140	Trmt13	96	86.192	ENSPPRG00000003424	TRMT13	100	87.156	Panthera_pardus
ENSRNOG00000015140	Trmt13	96	86.192	ENSPTIG00000018598	TRMT13	100	87.156	Panthera_tigris_altaica
ENSRNOG00000015140	Trmt13	96	85.744	ENSPTRG00000001001	TRMT13	99	85.744	Pan_troglodytes
ENSRNOG00000015140	Trmt13	96	86.192	ENSPANG00000007598	TRMT13	100	85.851	Papio_anubis
ENSRNOG00000015140	Trmt13	93	55.940	ENSPKIG00000001514	trmt13	98	55.940	Paramormyrops_kingsleyae
ENSRNOG00000015140	Trmt13	84	67.386	ENSPSIG00000012703	TRMT13	99	67.386	Pelodiscus_sinensis
ENSRNOG00000015140	Trmt13	94	51.178	ENSPMGG00000013298	trmt13	95	51.178	Periophthalmus_magnuspinnatus
ENSRNOG00000015140	Trmt13	97	87.526	ENSPEMG00000000275	Trmt13	100	87.526	Peromyscus_maniculatus_bairdii
ENSRNOG00000015140	Trmt13	93	46.154	ENSPMAG00000000823	trmt13	98	46.058	Petromyzon_marinus
ENSRNOG00000015140	Trmt13	96	73.013	ENSPCIG00000007699	TRMT13	99	73.640	Phascolarctos_cinereus
ENSRNOG00000015140	Trmt13	94	50.429	ENSPFOG00000008675	trmt13	96	50.429	Poecilia_formosa
ENSRNOG00000015140	Trmt13	93	49.471	ENSPLAG00000009709	trmt13	99	49.471	Poecilia_latipinna
ENSRNOG00000015140	Trmt13	93	48.408	ENSPMEG00000022954	trmt13	99	48.408	Poecilia_mexicana
ENSRNOG00000015140	Trmt13	76	51.169	ENSPREG00000005645	trmt13	91	50.181	Poecilia_reticulata
ENSRNOG00000015140	Trmt13	96	85.565	ENSPPYG00000001120	TRMT13	99	85.565	Pongo_abelii
ENSRNOG00000015140	Trmt13	96	84.310	ENSPCAG00000002340	TRMT13	99	84.310	Procavia_capensis
ENSRNOG00000015140	Trmt13	96	86.820	ENSPCOG00000017984	TRMT13	100	86.239	Propithecus_coquereli
ENSRNOG00000015140	Trmt13	96	85.356	ENSPVAG00000017430	TRMT13	99	85.356	Pteropus_vampyrus
ENSRNOG00000015140	Trmt13	93	51.392	ENSPNYG00000013690	trmt13	99	51.392	Pundamilia_nyererei
ENSRNOG00000015140	Trmt13	94	55.224	ENSPNAG00000022130	trmt13	99	55.224	Pygocentrus_nattereri
ENSRNOG00000015140	Trmt13	96	86.192	ENSRBIG00000037686	TRMT13	100	85.321	Rhinopithecus_bieti
ENSRNOG00000015140	Trmt13	96	86.192	ENSRROG00000044057	TRMT13	100	85.321	Rhinopithecus_roxellana
ENSRNOG00000015140	Trmt13	96	86.164	ENSSBOG00000026541	TRMT13	99	87.037	Saimiri_boliviensis_boliviensis
ENSRNOG00000015140	Trmt13	86	75.291	ENSSHAG00000005213	TRMT13	95	75.291	Sarcophilus_harrisii
ENSRNOG00000015140	Trmt13	94	54.721	ENSSFOG00015017560	trmt13	98	54.721	Scleropages_formosus
ENSRNOG00000015140	Trmt13	94	49.792	ENSSMAG00000014592	trmt13	97	49.792	Scophthalmus_maximus
ENSRNOG00000015140	Trmt13	93	50.104	ENSSDUG00000015508	trmt13	97	49.590	Seriola_dumerili
ENSRNOG00000015140	Trmt13	93	50.208	ENSSLDG00000019060	trmt13	96	50.208	Seriola_lalandi_dorsalis
ENSRNOG00000015140	Trmt13	93	74.026	ENSSARG00000010344	TRMT13	97	74.026	Sorex_araneus
ENSRNOG00000015140	Trmt13	92	67.105	ENSSPUG00000016339	TRMT13	99	67.105	Sphenodon_punctatus
ENSRNOG00000015140	Trmt13	92	52.174	ENSSPAG00000011922	trmt13	98	52.043	Stegastes_partitus
ENSRNOG00000015140	Trmt13	96	84.519	ENSSSCG00000006869	TRMT13	99	84.519	Sus_scrofa
ENSRNOG00000015140	Trmt13	92	65.646	ENSTGUG00000005253	TRMT13	98	65.646	Taeniopygia_guttata
ENSRNOG00000015140	Trmt13	92	50.000	ENSTRUG00000008400	trmt13	97	50.000	Takifugu_rubripes
ENSRNOG00000015140	Trmt13	83	69.492	ENSTBEG00000008911	TRMT13	99	69.492	Tupaia_belangeri
ENSRNOG00000015140	Trmt13	96	79.707	ENSUAMG00000017251	TRMT13	99	79.707	Ursus_americanus
ENSRNOG00000015140	Trmt13	96	84.310	ENSUMAG00000007901	TRMT13	99	85.548	Ursus_maritimus
ENSRNOG00000015140	Trmt13	85	70.213	ENSVPAG00000001034	TRMT13	98	70.213	Vicugna_pacos
ENSRNOG00000015140	Trmt13	96	85.595	ENSVVUG00000021996	TRMT13	99	85.595	Vulpes_vulpes
ENSRNOG00000015140	Trmt13	95	55.626	ENSXETG00000013204	trmt13	99	55.626	Xenopus_tropicalis
ENSRNOG00000015140	Trmt13	93	47.983	ENSXMAG00000010765	trmt13	99	47.983	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0106050	tRNA 2'-O-methyltransferase activity	-	IEA	Function