EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000015188 (Gene tree)
Gene ID: -
Gene Symbol: AABR07053681.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 4249 bases
Position: chr3:120153618-120157866
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	1	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	2	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	3	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	4	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	5	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	6	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	7	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	8	9
ENSRNOP00000020367	zf-C2H2	PF00096.26	2.4e-50	9	9
ENSRNOP00000020367	zf-met	PF12874.7	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000020367	AABR07053681.1-201	3779	-	ENSRNOP00000020367	348 (aa)	-	D3ZUD1

Gene Model

Click here to download ENSRNOG00000015188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000015188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000015188	AABR07053681.1	80	38.276	ENSRNOG00000008239	Repin1	84	38.276
ENSRNOG00000015188	AABR07053681.1	94	39.420	ENSRNOG00000002713	Zfp672	88	39.193
ENSRNOG00000015188	AABR07053681.1	88	53.394	ENSRNOG00000043341	Zfp51	91	53.394
ENSRNOG00000015188	AABR07053681.1	85	31.321	ENSRNOG00000007576	Zfp597	68	31.321
ENSRNOG00000015188	AABR07053681.1	87	61.066	ENSRNOG00000030308	Zfp251	67	61.066
ENSRNOG00000015188	AABR07053681.1	84	41.475	ENSRNOG00000055761	Zfp574	71	41.447
ENSRNOG00000015188	AABR07053681.1	79	38.182	ENSRNOG00000016874	Zfp521	67	38.182
ENSRNOG00000015188	AABR07053681.1	80	50.000	ENSRNOG00000016417	Zfp136	89	50.000
ENSRNOG00000015188	AABR07053681.1	87	53.614	ENSRNOG00000003455	Zfp13	75	51.351
ENSRNOG00000015188	AABR07053681.1	81	57.613	ENSRNOG00000032625	AC118165.1	100	57.613
ENSRNOG00000015188	AABR07053681.1	91	42.500	ENSRNOG00000028628	LOC100911196	78	40.741
ENSRNOG00000015188	AABR07053681.1	81	40.455	ENSRNOG00000013460	Zfp319	91	40.455
ENSRNOG00000015188	AABR07053681.1	80	40.541	ENSRNOG00000014658	Zfp423	88	40.541
ENSRNOG00000015188	AABR07053681.1	89	54.656	ENSRNOG00000025937	Zfp26	88	54.098
ENSRNOG00000015188	AABR07053681.1	81	55.785	ENSRNOG00000014712	Zfp39	65	55.785
ENSRNOG00000015188	AABR07053681.1	97	46.691	ENSRNOG00000006684	Zfp317	99	50.000
ENSRNOG00000015188	AABR07053681.1	81	50.820	ENSRNOG00000052406	LOC102552527	88	50.820
ENSRNOG00000015188	AABR07053681.1	80	52.016	ENSRNOG00000024056	Zfp17	79	52.016
ENSRNOG00000015188	AABR07053681.1	85	51.546	ENSRNOG00000019416	Zfp61	87	51.546
ENSRNOG00000015188	AABR07053681.1	78	59.259	ENSRNOG00000014331	Zfp810	85	59.259
ENSRNOG00000015188	AABR07053681.1	70	35.870	ENSRNOG00000016279	Zfp865	69	35.870
ENSRNOG00000015188	AABR07053681.1	80	61.728	ENSRNOG00000030517	Zfp879	67	61.728
ENSRNOG00000015188	AABR07053681.1	94	56.557	ENSRNOG00000048394	Zfp560	85	56.557
ENSRNOG00000015188	AABR07053681.1	70	57.078	ENSRNOG00000019059	Zfp1	73	57.078
ENSRNOG00000015188	AABR07053681.1	93	53.279	ENSRNOG00000022431	Zfp867	94	53.279
ENSRNOG00000015188	AABR07053681.1	89	60.494	ENSRNOG00000042777	Zfp28	66	60.494
ENSRNOG00000015188	AABR07053681.1	85	38.956	ENSRNOG00000023679	Prdm5	68	42.105
ENSRNOG00000015188	AABR07053681.1	82	52.852	ENSRNOG00000049259	LOC102549842	94	53.036
ENSRNOG00000015188	AABR07053681.1	69	31.933	ENSRNOG00000022730	Zfp57	63	31.933
ENSRNOG00000015188	AABR07053681.1	71	41.176	ENSRNOG00000047699	Snai2	50	41.176
ENSRNOG00000015188	AABR07053681.1	81	51.724	ENSRNOG00000061533	AABR07001926.3	98	51.724
ENSRNOG00000015188	AABR07053681.1	81	53.293	ENSRNOG00000029490	Znf768	50	52.941
ENSRNOG00000015188	AABR07053681.1	91	45.228	ENSRNOG00000027923	Mynn	67	39.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000015188	AABR07053681.1	100	81.534	ENSG00000275111	ZNF2	98	81.899	Homo_sapiens
ENSRNOG00000015188	AABR07053681.1	100	79.830	ENSANAG00000031410	ZNF2	87	80.415	Aotus_nancymaae
ENSRNOG00000015188	AABR07053681.1	100	79.545	ENSCJAG00000018930	ZNF2	87	79.822	Callithrix_jacchus
ENSRNOG00000015188	AABR07053681.1	99	81.662	ENSCHIG00000012483	ZNF2	82	81.662	Capra_hircus
ENSRNOG00000015188	AABR07053681.1	96	81.657	ENSTSYG00000004899	ZNF2	87	81.657	Carlito_syrichta
ENSRNOG00000015188	AABR07053681.1	96	81.657	ENSCAPG00000017499	ZNF2	89	81.657	Cavia_aperea
ENSRNOG00000015188	AABR07053681.1	100	79.603	ENSCPOG00000035126	ZNF2	83	79.603	Cavia_porcellus
ENSRNOG00000015188	AABR07053681.1	100	79.830	ENSCCAG00000027604	ZNF2	87	80.712	Cebus_capucinus
ENSRNOG00000015188	AABR07053681.1	99	79.370	ENSCATG00000035067	ZNF2	87	79.403	Cercocebus_atys
ENSRNOG00000015188	AABR07053681.1	100	81.429	ENSCLAG00000003116	ZNF2	83	81.429	Chinchilla_lanigera
ENSRNOG00000015188	AABR07053681.1	99	79.370	ENSCSAG00000017407	ZNF2	91	79.370	Chlorocebus_sabaeus
ENSRNOG00000015188	AABR07053681.1	99	78.223	ENSCANG00000036216	ZNF2	87	78.635	Colobus_angolensis_palliatus
ENSRNOG00000015188	AABR07053681.1	99	78.992	ENSDORG00000016625	Zfp661	99	82.317	Dipodomys_ordii
ENSRNOG00000015188	AABR07053681.1	99	83.095	ENSEASG00005005268	ZNF2	93	84.320	Equus_asinus_asinus
ENSRNOG00000015188	AABR07053681.1	99	81.375	ENSECAG00000016130	ZNF2	82	81.375	Equus_caballus
ENSRNOG00000015188	AABR07053681.1	100	81.020	ENSFDAG00000008549	ZNF2	82	81.020	Fukomys_damarensis
ENSRNOG00000015188	AABR07053681.1	100	77.534	ENSGGOG00000039661	ZNF2	98	80.712	Gorilla_gorilla
ENSRNOG00000015188	AABR07053681.1	99	80.966	ENSHGLG00000005282	ZNF2	85	80.403	Heterocephalus_glaber_female
ENSRNOG00000015188	AABR07053681.1	99	80.966	ENSHGLG00100018809	ZNF2	85	80.403	Heterocephalus_glaber_male
ENSRNOG00000015188	AABR07053681.1	99	80.692	ENSSTOG00000026739	ZNF2	82	80.692	Ictidomys_tridecemlineatus
ENSRNOG00000015188	AABR07053681.1	99	82.659	ENSJJAG00000014531	Zfp661	82	82.659	Jaculus_jaculus
ENSRNOG00000015188	AABR07053681.1	99	80.229	ENSLAFG00000006959	ZNF2	82	80.229	Loxodonta_africana
ENSRNOG00000015188	AABR07053681.1	99	79.370	ENSMFAG00000039940	ZNF2	87	79.403	Macaca_fascicularis
ENSRNOG00000015188	AABR07053681.1	99	79.370	ENSMMUG00000019423	ZNF2	87	79.403	Macaca_mulatta
ENSRNOG00000015188	AABR07053681.1	99	79.656	ENSMNEG00000035673	ZNF2	87	79.701	Macaca_nemestrina
ENSRNOG00000015188	AABR07053681.1	99	79.370	ENSMLEG00000042823	ZNF2	87	79.403	Mandrillus_leucophaeus
ENSRNOG00000015188	AABR07053681.1	100	77.401	ENSMICG00000031069	ZNF2	87	78.466	Microcebus_murinus
ENSRNOG00000015188	AABR07053681.1	91	63.823	ENSMODG00000023146	-	84	63.823	Monodelphis_domestica
ENSRNOG00000015188	AABR07053681.1	100	90.805	MGP_CAROLIEiJ_G0024261	Zfp661	81	90.805	Mus_caroli
ENSRNOG00000015188	AABR07053681.1	100	91.667	ENSMUSG00000034800	Zfp661	81	91.667	Mus_musculus
ENSRNOG00000015188	AABR07053681.1	99	91.066	MGP_PahariEiJ_G0025706	Zfp661	81	91.066	Mus_pahari
ENSRNOG00000015188	AABR07053681.1	100	91.667	MGP_SPRETEiJ_G0025181	Zfp661	81	91.667	Mus_spretus
ENSRNOG00000015188	AABR07053681.1	100	83.286	ENSNGAG00000014357	Zfp661	82	83.286	Nannospalax_galili
ENSRNOG00000015188	AABR07053681.1	100	80.966	ENSNLEG00000000004	ZNF2	98	81.602	Nomascus_leucogenys
ENSRNOG00000015188	AABR07053681.1	99	53.026	ENSMEUG00000004196	-	94	53.026	Notamacropus_eugenii
ENSRNOG00000015188	AABR07053681.1	99	66.954	ENSMEUG00000005903	-	81	66.954	Notamacropus_eugenii
ENSRNOG00000015188	AABR07053681.1	99	80.571	ENSOPRG00000001825	ZNF2	82	80.571	Ochotona_princeps
ENSRNOG00000015188	AABR07053681.1	99	78.674	ENSODEG00000005837	ZNF2	82	78.674	Octodon_degus
ENSRNOG00000015188	AABR07053681.1	100	79.023	ENSOCUG00000003561	ZNF2	91	79.023	Oryctolagus_cuniculus
ENSRNOG00000015188	AABR07053681.1	99	81.429	ENSOARG00000014166	ZNF2	73	81.429	Ovis_aries
ENSRNOG00000015188	AABR07053681.1	100	81.250	ENSPPAG00000042229	ZNF2	87	81.602	Pan_paniscus
ENSRNOG00000015188	AABR07053681.1	100	81.250	ENSPTRG00000012207	ZNF2	92	81.250	Pan_troglodytes
ENSRNOG00000015188	AABR07053681.1	99	79.370	ENSPANG00000018071	ZNF2	87	79.403	Papio_anubis
ENSRNOG00000015188	AABR07053681.1	80	68.047	ENSPCIG00000023001	-	100	48.669	Phascolarctos_cinereus
ENSRNOG00000015188	AABR07053681.1	98	65.789	ENSPCIG00000023002	-	86	65.789	Phascolarctos_cinereus
ENSRNOG00000015188	AABR07053681.1	100	81.250	ENSPPYG00000012053	ZNF2	83	81.250	Pongo_abelii
ENSRNOG00000015188	AABR07053681.1	97	78.042	ENSPCAG00000016939	ZNF2	78	78.042	Procavia_capensis
ENSRNOG00000015188	AABR07053681.1	100	79.661	ENSPCOG00000021930	ZNF2	87	80.826	Propithecus_coquereli
ENSRNOG00000015188	AABR07053681.1	99	80.286	ENSPVAG00000006095	ZNF2	82	80.286	Pteropus_vampyrus
ENSRNOG00000015188	AABR07053681.1	100	80.114	ENSSBOG00000030730	ZNF2	88	80.838	Saimiri_boliviensis_boliviensis
ENSRNOG00000015188	AABR07053681.1	98	63.352	ENSSHAG00000011906	-	82	63.352	Sarcophilus_harrisii
ENSRNOG00000015188	AABR07053681.1	99	51.862	ENSSHAG00000011714	-	81	51.862	Sarcophilus_harrisii
ENSRNOG00000015188	AABR07053681.1	99	52.632	ENSSARG00000002081	ZNF2	82	59.375	Sorex_araneus
ENSRNOG00000015188	AABR07053681.1	100	79.037	ENSSSCG00000008117	ZNF2	92	79.037	Sus_scrofa
ENSRNOG00000015188	AABR07053681.1	100	71.671	ENSTBEG00000012847	ZNF2	83	71.671	Tupaia_belangeri
ENSRNOG00000015188	AABR07053681.1	98	80.980	ENSTTRG00000004968	ZNF2	82	80.980	Tursiops_truncatus