EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000015274 (Gene tree)
Gene ID: 84473
Gene Symbol: Ddx20
Alias: Dp103|LOC295346
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 8041 bases
Position: chr2:208144139-208152179
Accession: 621744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000062813	ResIII	PF04851.15	2.8e-06	1	1
ENSRNOP00000062813	DEAD	PF00270.29	4.8e-32	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000068152	-	2801	XM_006233099	ENSRNOP00000062813	824 (aa)	XP_006233161	F1MAM8

Gene Model

Click here to download ENSRNOG00000015274's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000015274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000015274	Ddx20	50	32.854	ENSRNOG00000053932	Ddx6	84	32.854
ENSRNOG00000015274	Ddx20	50	34.140	ENSRNOG00000004373	Ddx39a	92	34.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000015274	Ddx20	100	83.636	ENSG00000064703	DDX20	100	83.394	Homo_sapiens
ENSRNOG00000015274	Ddx20	95	51.146	ENSAPOG00000017383	DDX20	68	62.803	Acanthochromis_polyacanthus
ENSRNOG00000015274	Ddx20	99	83.518	ENSAMEG00000005344	DDX20	99	83.273	Ailuropoda_melanoleuca
ENSRNOG00000015274	Ddx20	71	61.969	ENSACIG00000013095	ddx20	70	61.969	Amphilophus_citrinellus
ENSRNOG00000015274	Ddx20	95	52.358	ENSAOCG00000013474	DDX20	98	51.675	Amphiprion_ocellaris
ENSRNOG00000015274	Ddx20	95	51.995	ENSAPEG00000006690	ddx20	98	51.497	Amphiprion_percula
ENSRNOG00000015274	Ddx20	95	50.295	ENSATEG00000002941	ddx20	68	64.187	Anabas_testudineus
ENSRNOG00000015274	Ddx20	90	49.530	ENSAPLG00000013826	DDX20	99	48.656	Anas_platyrhynchos
ENSRNOG00000015274	Ddx20	93	59.178	ENSACAG00000006235	DDX20	98	58.122	Anolis_carolinensis
ENSRNOG00000015274	Ddx20	99	83.395	ENSANAG00000037881	DDX20	100	82.788	Aotus_nancymaae
ENSRNOG00000015274	Ddx20	71	63.113	ENSACLG00000009485	ddx20	70	61.833	Astatotilapia_calliptera
ENSRNOG00000015274	Ddx20	70	62.906	ENSAMXG00000040738	ddx20	78	62.051	Astyanax_mexicanus
ENSRNOG00000015274	Ddx20	99	83.804	ENSBTAG00000018717	DDX20	100	83.313	Bos_taurus
ENSRNOG00000015274	Ddx20	99	82.534	ENSCJAG00000013428	DDX20	96	80.485	Callithrix_jacchus
ENSRNOG00000015274	Ddx20	97	83.250	ENSCAFG00000013674	DDX20	100	82.511	Canis_familiaris
ENSRNOG00000015274	Ddx20	98	83.127	ENSCAFG00020008055	DDX20	97	91.049	Canis_lupus_dingo
ENSRNOG00000015274	Ddx20	99	83.804	ENSCHIG00000011219	DDX20	100	83.313	Capra_hircus
ENSRNOG00000015274	Ddx20	98	83.602	ENSTSYG00000000153	DDX20	99	82.524	Carlito_syrichta
ENSRNOG00000015274	Ddx20	84	76.768	ENSCAPG00000017427	DDX20	100	76.768	Cavia_aperea
ENSRNOG00000015274	Ddx20	100	80.485	ENSCPOG00000032340	DDX20	100	80.242	Cavia_porcellus
ENSRNOG00000015274	Ddx20	100	83.394	ENSCCAG00000026759	DDX20	100	83.030	Cebus_capucinus
ENSRNOG00000015274	Ddx20	100	83.414	ENSCATG00000039030	DDX20	100	83.172	Cercocebus_atys
ENSRNOG00000015274	Ddx20	100	81.477	ENSCLAG00000008874	DDX20	100	81.235	Chinchilla_lanigera
ENSRNOG00000015274	Ddx20	100	83.656	ENSCSAG00000001582	DDX20	99	83.414	Chlorocebus_sabaeus
ENSRNOG00000015274	Ddx20	63	86.228	ENSCHOG00000002610	DDX20	82	86.228	Choloepus_hoffmanni
ENSRNOG00000015274	Ddx20	94	62.972	ENSCPBG00000021256	DDX20	99	61.922	Chrysemys_picta_bellii
ENSRNOG00000015274	Ddx20	100	83.535	ENSCANG00000041894	DDX20	100	83.293	Colobus_angolensis_palliatus
ENSRNOG00000015274	Ddx20	99	91.411	ENSCGRG00001014132	Ddx20	100	91.162	Cricetulus_griseus_chok1gshd
ENSRNOG00000015274	Ddx20	87	90.000	ENSCGRG00000002300	Ddx20	100	90.000	Cricetulus_griseus_crigri
ENSRNOG00000015274	Ddx20	72	54.089	ENSCSEG00000018265	DDX20	83	53.645	Cynoglossus_semilaevis
ENSRNOG00000015274	Ddx20	95	51.171	ENSCVAG00000014821	ddx20	99	50.918	Cyprinodon_variegatus
ENSRNOG00000015274	Ddx20	95	51.163	ENSDARG00000061204	ddx20	96	51.288	Danio_rerio
ENSRNOG00000015274	Ddx20	99	83.047	ENSDNOG00000030865	DDX20	100	82.545	Dasypus_novemcinctus
ENSRNOG00000015274	Ddx20	99	84.785	ENSDORG00000011660	Ddx20	100	84.709	Dipodomys_ordii
ENSRNOG00000015274	Ddx20	62	95.506	ENSETEG00000002726	DDX20	67	93.750	Echinops_telfairi
ENSRNOG00000015274	Ddx20	99	84.010	ENSEASG00005005454	DDX20	100	83.636	Equus_asinus_asinus
ENSRNOG00000015274	Ddx20	99	84.133	ENSECAG00000013565	DDX20	100	83.758	Equus_caballus
ENSRNOG00000015274	Ddx20	95	47.774	ENSELUG00000010260	ddx20	99	47.894	Esox_lucius
ENSRNOG00000015274	Ddx20	99	83.887	ENSFCAG00000025736	DDX20	100	83.636	Felis_catus
ENSRNOG00000015274	Ddx20	88	56.599	ENSFALG00000000666	DDX20	99	56.967	Ficedula_albicollis
ENSRNOG00000015274	Ddx20	100	76.923	ENSFDAG00000001140	DDX20	100	76.807	Fukomys_damarensis
ENSRNOG00000015274	Ddx20	95	51.538	ENSFHEG00000019742	ddx20	99	50.431	Fundulus_heteroclitus
ENSRNOG00000015274	Ddx20	94	60.976	ENSGALG00000001504	DDX20	99	60.513	Gallus_gallus
ENSRNOG00000015274	Ddx20	95	53.094	ENSGAFG00000006427	ddx20	99	52.369	Gambusia_affinis
ENSRNOG00000015274	Ddx20	94	63.131	ENSGAGG00000000130	DDX20	99	63.005	Gopherus_agassizii
ENSRNOG00000015274	Ddx20	100	83.636	ENSGGOG00000015576	DDX20	100	83.394	Gorilla_gorilla
ENSRNOG00000015274	Ddx20	71	63.283	ENSHBUG00000007853	ddx20	70	62.000	Haplochromis_burtoni
ENSRNOG00000015274	Ddx20	100	81.212	ENSHGLG00000014848	DDX20	100	80.970	Heterocephalus_glaber_female
ENSRNOG00000015274	Ddx20	100	81.212	ENSHGLG00100003740	DDX20	100	80.970	Heterocephalus_glaber_male
ENSRNOG00000015274	Ddx20	95	51.875	ENSHCOG00000001915	ddx20	99	50.370	Hippocampus_comes
ENSRNOG00000015274	Ddx20	70	61.962	ENSIPUG00000004876	ddx20	69	61.274	Ictalurus_punctatus
ENSRNOG00000015274	Ddx20	99	84.379	ENSSTOG00000029089	DDX20	100	84.000	Ictidomys_tridecemlineatus
ENSRNOG00000015274	Ddx20	100	84.727	ENSJJAG00000011198	Ddx20	100	84.606	Jaculus_jaculus
ENSRNOG00000015274	Ddx20	72	60.914	ENSKMAG00000019022	ddx20	99	51.613	Kryptolebias_marmoratus
ENSRNOG00000015274	Ddx20	96	50.422	ENSLBEG00000019194	ddx20	99	49.822	Labrus_bergylta
ENSRNOG00000015274	Ddx20	95	55.514	ENSLACG00000018491	DDX20	99	55.501	Latimeria_chalumnae
ENSRNOG00000015274	Ddx20	95	54.100	ENSLOCG00000010372	ddx20	100	53.440	Lepisosteus_oculatus
ENSRNOG00000015274	Ddx20	98	79.064	ENSLAFG00000014646	DDX20	99	78.571	Loxodonta_africana
ENSRNOG00000015274	Ddx20	100	83.777	ENSMFAG00000031755	DDX20	100	83.535	Macaca_fascicularis
ENSRNOG00000015274	Ddx20	100	83.777	ENSMNEG00000005757	DDX20	100	83.535	Macaca_nemestrina
ENSRNOG00000015274	Ddx20	100	83.414	ENSMLEG00000005722	DDX20	100	83.293	Mandrillus_leucophaeus
ENSRNOG00000015274	Ddx20	95	50.665	ENSMAMG00000009654	ddx20	99	50.663	Mastacembelus_armatus
ENSRNOG00000015274	Ddx20	71	63.113	ENSMZEG00005027081	ddx20	70	61.833	Maylandia_zebra
ENSRNOG00000015274	Ddx20	92	59.745	ENSMGAG00000004624	DDX20	99	59.335	Meleagris_gallopavo
ENSRNOG00000015274	Ddx20	99	90.184	ENSMAUG00000010659	Ddx20	100	89.952	Mesocricetus_auratus
ENSRNOG00000015274	Ddx20	100	84.242	ENSMICG00000011509	DDX20	100	84.121	Microcebus_murinus
ENSRNOG00000015274	Ddx20	99	89.571	ENSMOCG00000012954	Ddx20	100	89.346	Microtus_ochrogaster
ENSRNOG00000015274	Ddx20	95	51.728	ENSMMOG00000013103	ddx20	72	61.592	Mola_mola
ENSRNOG00000015274	Ddx20	99	73.006	ENSMODG00000001311	DDX20	99	72.202	Monodelphis_domestica
ENSRNOG00000015274	Ddx20	95	50.236	ENSMALG00000010740	ddx20	66	61.383	Monopterus_albus
ENSRNOG00000015274	Ddx20	99	94.219	MGP_CAROLIEiJ_G0025474	Ddx20	99	93.925	Mus_caroli
ENSRNOG00000015274	Ddx20	99	92.866	ENSMUSG00000027905	Ddx20	99	92.467	Mus_musculus
ENSRNOG00000015274	Ddx20	96	93.308	MGP_PahariEiJ_G0026919	Ddx20	99	92.570	Mus_pahari
ENSRNOG00000015274	Ddx20	99	93.235	MGP_SPRETEiJ_G0026423	Ddx20	99	92.831	Mus_spretus
ENSRNOG00000015274	Ddx20	99	84.010	ENSMPUG00000004921	DDX20	100	83.758	Mustela_putorius_furo
ENSRNOG00000015274	Ddx20	84	80.087	ENSMLUG00000009676	DDX20	100	79.942	Myotis_lucifugus
ENSRNOG00000015274	Ddx20	100	85.455	ENSNGAG00000022953	Ddx20	100	85.455	Nannospalax_galili
ENSRNOG00000015274	Ddx20	95	52.317	ENSNBRG00000020244	ddx20	70	62.203	Neolamprologus_brichardi
ENSRNOG00000015274	Ddx20	100	84.364	ENSNLEG00000004040	DDX20	100	84.121	Nomascus_leucogenys
ENSRNOG00000015274	Ddx20	62	77.062	ENSMEUG00000013459	-	63	77.062	Notamacropus_eugenii
ENSRNOG00000015274	Ddx20	66	91.940	ENSOPRG00000004035	DDX20	86	89.197	Ochotona_princeps
ENSRNOG00000015274	Ddx20	71	63.051	ENSONIG00000012436	ddx20	99	52.334	Oreochromis_niloticus
ENSRNOG00000015274	Ddx20	71	74.150	ENSOANG00000003318	DDX20	91	73.639	Ornithorhynchus_anatinus
ENSRNOG00000015274	Ddx20	97	84.442	ENSOCUG00000025939	DDX20	100	83.313	Oryctolagus_cuniculus
ENSRNOG00000015274	Ddx20	95	52.104	ENSORLG00000008949	ddx20	99	51.925	Oryzias_latipes
ENSRNOG00000015274	Ddx20	95	52.369	ENSORLG00020003852	ddx20	99	52.174	Oryzias_latipes_hni
ENSRNOG00000015274	Ddx20	95	52.244	ENSORLG00015020167	ddx20	99	52.050	Oryzias_latipes_hsok
ENSRNOG00000015274	Ddx20	95	51.875	ENSOMEG00000013657	ddx20	99	52.185	Oryzias_melastigma
ENSRNOG00000015274	Ddx20	100	83.918	ENSOGAG00000010503	DDX20	99	83.676	Otolemur_garnettii
ENSRNOG00000015274	Ddx20	99	83.843	ENSOARG00000019651	DDX20	100	83.353	Ovis_aries
ENSRNOG00000015274	Ddx20	100	83.394	ENSPPAG00000031680	DDX20	100	83.152	Pan_paniscus
ENSRNOG00000015274	Ddx20	99	84.256	ENSPPRG00000022979	DDX20	100	84.000	Panthera_pardus
ENSRNOG00000015274	Ddx20	100	83.394	ENSPTRG00000001105	DDX20	100	83.273	Pan_troglodytes
ENSRNOG00000015274	Ddx20	100	83.535	ENSPANG00000017985	DDX20	100	83.293	Papio_anubis
ENSRNOG00000015274	Ddx20	92	51.605	ENSPKIG00000020161	ddx20	99	51.737	Paramormyrops_kingsleyae
ENSRNOG00000015274	Ddx20	88	60.870	ENSPSIG00000003636	DDX20	100	60.734	Pelodiscus_sinensis
ENSRNOG00000015274	Ddx20	95	51.621	ENSPMGG00000005966	ddx20	99	51.621	Periophthalmus_magnuspinnatus
ENSRNOG00000015274	Ddx20	99	91.769	ENSPEMG00000019595	Ddx20	100	91.515	Peromyscus_maniculatus_bairdii
ENSRNOG00000015274	Ddx20	99	72.384	ENSPCIG00000027721	DDX20	99	72.628	Phascolarctos_cinereus
ENSRNOG00000015274	Ddx20	95	52.730	ENSPFOG00000010540	ddx20	99	52.340	Poecilia_formosa
ENSRNOG00000015274	Ddx20	95	52.912	ENSPLAG00000009925	ddx20	99	52.919	Poecilia_latipinna
ENSRNOG00000015274	Ddx20	95	52.292	ENSPMEG00000005998	ddx20	99	52.298	Poecilia_mexicana
ENSRNOG00000015274	Ddx20	95	52.475	ENSPREG00000018837	ddx20	99	52.605	Poecilia_reticulata
ENSRNOG00000015274	Ddx20	100	83.879	ENSPPYG00000001026	DDX20	100	83.636	Pongo_abelii
ENSRNOG00000015274	Ddx20	100	83.394	ENSPCOG00000025185	DDX20	100	83.394	Propithecus_coquereli
ENSRNOG00000015274	Ddx20	100	82.788	ENSPVAG00000004664	DDX20	100	82.545	Pteropus_vampyrus
ENSRNOG00000015274	Ddx20	71	63.113	ENSPNYG00000014433	ddx20	70	61.833	Pundamilia_nyererei
ENSRNOG00000015274	Ddx20	71	61.290	ENSPNAG00000018148	ddx20	72	60.951	Pygocentrus_nattereri
ENSRNOG00000015274	Ddx20	100	83.656	ENSRBIG00000030629	DDX20	100	83.414	Rhinopithecus_bieti
ENSRNOG00000015274	Ddx20	100	83.656	ENSRROG00000030608	DDX20	100	83.414	Rhinopithecus_roxellana
ENSRNOG00000015274	Ddx20	100	83.394	ENSSBOG00000024789	DDX20	100	83.030	Saimiri_boliviensis_boliviensis
ENSRNOG00000015274	Ddx20	84	71.983	ENSSHAG00000014518	DDX20	99	71.839	Sarcophilus_harrisii
ENSRNOG00000015274	Ddx20	95	53.021	ENSSFOG00015008354	ddx20	72	63.043	Scleropages_formosus
ENSRNOG00000015274	Ddx20	76	62.306	ENSSMAG00000007498	ddx20	80	62.995	Scophthalmus_maximus
ENSRNOG00000015274	Ddx20	95	52.494	ENSSDUG00000015980	ddx20	98	53.474	Seriola_dumerili
ENSRNOG00000015274	Ddx20	71	61.760	ENSSLDG00000000437	ddx20	65	61.760	Seriola_lalandi_dorsalis
ENSRNOG00000015274	Ddx20	88	70.718	ENSSARG00000013569	DDX20	88	70.718	Sorex_araneus
ENSRNOG00000015274	Ddx20	97	50.344	ENSSPAG00000020022	ddx20	71	60.960	Stegastes_partitus
ENSRNOG00000015274	Ddx20	99	81.851	ENSSSCG00000006783	DDX20	100	80.695	Sus_scrofa
ENSRNOG00000015274	Ddx20	77	66.510	ENSTGUG00000013660	DDX20	85	69.795	Taeniopygia_guttata
ENSRNOG00000015274	Ddx20	95	48.599	ENSTRUG00000023712	ddx20	77	60.309	Takifugu_rubripes
ENSRNOG00000015274	Ddx20	95	49.636	ENSTNIG00000019425	ddx20	99	49.272	Tetraodon_nigroviridis
ENSRNOG00000015274	Ddx20	84	83.511	ENSTTRG00000005131	DDX20	84	83.511	Tursiops_truncatus
ENSRNOG00000015274	Ddx20	99	81.550	ENSUAMG00000018924	DDX20	100	81.939	Ursus_americanus
ENSRNOG00000015274	Ddx20	88	83.333	ENSUMAG00000013897	DDX20	92	83.333	Ursus_maritimus
ENSRNOG00000015274	Ddx20	99	82.331	ENSVPAG00000010031	DDX20	100	82.104	Vicugna_pacos
ENSRNOG00000015274	Ddx20	100	82.282	ENSVVUG00000016236	DDX20	99	82.382	Vulpes_vulpes
ENSRNOG00000015274	Ddx20	94	56.944	ENSXETG00000013568	ddx20	78	65.391	Xenopus_tropicalis
ENSRNOG00000015274	Ddx20	95	52.174	ENSXCOG00000007952	ddx20	97	51.995	Xiphophorus_couchianus
ENSRNOG00000015274	Ddx20	95	52.104	ENSXMAG00000007573	ddx20	99	51.111	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000387	spliceosomal snRNP assembly	-	IEA	Process
GO:0000387	spliceosomal snRNP assembly	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008285	negative regulation of cell proliferation	12007404.	IGI	Process
GO:0017053	transcriptional repressor complex	-	ISO	Component
GO:0019904	protein domain specific binding	11145740.	IPI	Function
GO:0030674	protein binding, bridging	-	IEA	Function
GO:0030674	protein binding, bridging	-	ISO	Function
GO:0032797	SMN complex	-	IEA	Component
GO:0032797	SMN complex	-	ISO	Component
GO:0034719	SMN-Sm protein complex	-	IEA	Component
GO:0034719	SMN-Sm protein complex	-	ISO	Component
GO:0042826	histone deacetylase binding	-	IEA	Function
GO:0042826	histone deacetylase binding	-	ISO	Function
GO:0043065	positive regulation of apoptotic process	-	IEA	Process
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	11145740.	IDA	Process
GO:0048477	oogenesis	-	IEA	Process
GO:0048477	oogenesis	-	ISO	Process
GO:0050810	regulation of steroid biosynthetic process	-	IEA	Process
GO:0050810	regulation of steroid biosynthetic process	-	ISO	Process
GO:0070491	repressing transcription factor binding	-	IEA	Function
GO:0070491	repressing transcription factor binding	-	ISO	Function
GO:0090571	RNA polymerase II transcription repressor complex	-	IEA	Component
GO:0090571	RNA polymerase II transcription repressor complex	-	ISO	Component