EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000015478 (Gene tree)
Gene ID: 399679
Gene Symbol: Aicda
Alias: AID
Full Name: activation-induced cytidine deaminase
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9751 bases
Position: chr4:155359921-155369671
Accession: 1303222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000020762	APOBEC_N	PF08210.11	7.4e-62	1	1
ENSRNOP00000020762	APOBEC_C	PF05240.14	1.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000020762	-	1206	-	ENSRNOP00000020762	198 (aa)	-	G3V7Y8

Gene Model

Click here to download ENSRNOG00000015478's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04672	Intestinal immune network for IgA production	KEGG
rno05340	Primary immunodeficiency	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000015478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000015478	Aicda	60	34.921	ENSRNOG00000015411	Apobec1	55	34.921
ENSRNOG00000015478	Aicda	88	40.244	ENSRNOG00000016852	Apobec3	85	40.244
ENSRNOG00000015478	Aicda	86	34.483	ENSRNOG00000012303	Apobec2	77	34.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000015478	Aicda	100	93.939	ENSG00000111732	AICDA	100	93.939	Homo_sapiens
ENSRNOG00000015478	Aicda	99	57.212	ENSAPOG00000023552	aicda	98	59.474	Acanthochromis_polyacanthus
ENSRNOG00000015478	Aicda	99	94.898	ENSAMEG00000007082	AICDA	99	94.898	Ailuropoda_melanoleuca
ENSRNOG00000015478	Aicda	98	60.914	ENSACIG00000012301	aicda	100	60.914	Amphilophus_citrinellus
ENSRNOG00000015478	Aicda	100	58.794	ENSAOCG00000000482	aicda	100	58.794	Amphiprion_ocellaris
ENSRNOG00000015478	Aicda	100	58.794	ENSAPEG00000009755	aicda	100	58.794	Amphiprion_percula
ENSRNOG00000015478	Aicda	99	61.616	ENSATEG00000022035	aicda	97	61.616	Anabas_testudineus
ENSRNOG00000015478	Aicda	99	87.755	ENSAPLG00000013954	AICDA	98	87.755	Anas_platyrhynchos
ENSRNOG00000015478	Aicda	100	87.374	ENSACAG00000017441	AICDA	99	87.374	Anolis_carolinensis
ENSRNOG00000015478	Aicda	100	95.960	ENSANAG00000022438	AICDA	100	95.960	Aotus_nancymaae
ENSRNOG00000015478	Aicda	98	60.914	ENSACLG00000022679	aicda	100	60.914	Astatotilapia_calliptera
ENSRNOG00000015478	Aicda	71	60.265	ENSAMXG00000037242	aicda	63	60.265	Astyanax_mexicanus
ENSRNOG00000015478	Aicda	100	92.965	ENSBTAG00000018849	AICDA	100	92.965	Bos_taurus
ENSRNOG00000015478	Aicda	100	95.960	ENSCJAG00000018856	AICDA	100	95.960	Callithrix_jacchus
ENSRNOG00000015478	Aicda	100	94.949	ENSCAFG00000013897	AICDA	85	94.949	Canis_familiaris
ENSRNOG00000015478	Aicda	100	93.939	ENSCAFG00020003515	AICDA	97	93.939	Canis_lupus_dingo
ENSRNOG00000015478	Aicda	100	90.452	ENSCHIG00000012409	AICDA	100	90.452	Capra_hircus
ENSRNOG00000015478	Aicda	100	92.424	ENSTSYG00000011304	AICDA	100	92.424	Carlito_syrichta
ENSRNOG00000015478	Aicda	97	92.228	ENSCPOG00000039255	-	100	92.228	Cavia_porcellus
ENSRNOG00000015478	Aicda	91	91.160	ENSCPOG00000037838	-	100	91.160	Cavia_porcellus
ENSRNOG00000015478	Aicda	97	93.782	ENSCPOG00000030440	-	100	93.782	Cavia_porcellus
ENSRNOG00000015478	Aicda	100	77.273	ENSCCAG00000030398	AICDA	100	77.273	Cebus_capucinus
ENSRNOG00000015478	Aicda	100	95.455	ENSCATG00000039986	AICDA	100	95.455	Cercocebus_atys
ENSRNOG00000015478	Aicda	99	95.408	ENSCSAG00000009663	AICDA	100	95.408	Chlorocebus_sabaeus
ENSRNOG00000015478	Aicda	100	72.864	ENSCHOG00000010248	AICDA	100	72.864	Choloepus_hoffmanni
ENSRNOG00000015478	Aicda	99	90.306	ENSCPBG00000014337	AICDA	98	90.306	Chrysemys_picta_bellii
ENSRNOG00000015478	Aicda	100	95.455	ENSCANG00000035131	AICDA	100	95.455	Colobus_angolensis_palliatus
ENSRNOG00000015478	Aicda	100	100.000	ENSCGRG00001009654	Aicda	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000015478	Aicda	100	100.000	ENSCGRG00000013829	Aicda	100	100.000	Cricetulus_griseus_crigri
ENSRNOG00000015478	Aicda	100	57.619	ENSCSEG00000018589	aicda	98	57.619	Cynoglossus_semilaevis
ENSRNOG00000015478	Aicda	99	60.500	ENSCVAG00000001218	aicda	99	60.500	Cyprinodon_variegatus
ENSRNOG00000015478	Aicda	100	63.768	ENSDARG00000015734	aicda	98	63.768	Danio_rerio
ENSRNOG00000015478	Aicda	90	91.620	ENSETEG00000014702	AICDA	99	91.620	Echinops_telfairi
ENSRNOG00000015478	Aicda	100	93.939	ENSEASG00005015947	AICDA	100	93.939	Equus_asinus_asinus
ENSRNOG00000015478	Aicda	100	95.455	ENSECAG00000018578	AICDA	100	95.455	Equus_caballus
ENSRNOG00000015478	Aicda	90	93.296	ENSEEUG00000013899	AICDA	99	93.296	Erinaceus_europaeus
ENSRNOG00000015478	Aicda	99	59.330	ENSELUG00000016293	aicda	98	59.330	Esox_lucius
ENSRNOG00000015478	Aicda	100	94.949	ENSFCAG00000006052	AICDA	85	94.949	Felis_catus
ENSRNOG00000015478	Aicda	99	81.122	ENSFALG00000007261	AICDA	100	81.122	Ficedula_albicollis
ENSRNOG00000015478	Aicda	91	85.635	ENSFDAG00000011141	AICDA	100	85.635	Fukomys_damarensis
ENSRNOG00000015478	Aicda	98	57.282	ENSFHEG00000015733	aicda	99	57.282	Fundulus_heteroclitus
ENSRNOG00000015478	Aicda	100	58.768	ENSGMOG00000004114	aicda	98	58.768	Gadus_morhua
ENSRNOG00000015478	Aicda	100	87.374	ENSGALG00000014280	AICDA	100	87.374	Gallus_gallus
ENSRNOG00000015478	Aicda	98	56.039	ENSGAFG00000013758	aicda	95	56.039	Gambusia_affinis
ENSRNOG00000015478	Aicda	100	56.190	ENSGACG00000010521	aicda	98	56.190	Gasterosteus_aculeatus
ENSRNOG00000015478	Aicda	99	89.286	ENSGAGG00000011838	-	98	89.286	Gopherus_agassizii
ENSRNOG00000015478	Aicda	100	89.394	ENSGAGG00000011839	-	100	89.394	Gopherus_agassizii
ENSRNOG00000015478	Aicda	99	93.878	ENSGGOG00000003338	AICDA	98	93.878	Gorilla_gorilla
ENSRNOG00000015478	Aicda	98	60.914	ENSHBUG00000014333	aicda	100	60.914	Haplochromis_burtoni
ENSRNOG00000015478	Aicda	99	96.429	ENSHGLG00000001443	AICDA	98	96.429	Heterocephalus_glaber_female
ENSRNOG00000015478	Aicda	100	95.960	ENSHGLG00100001381	AICDA	100	95.960	Heterocephalus_glaber_male
ENSRNOG00000015478	Aicda	95	59.375	ENSHCOG00000018886	aicda	97	59.375	Hippocampus_comes
ENSRNOG00000015478	Aicda	100	57.895	ENSIPUG00000007380	aicda	99	57.895	Ictalurus_punctatus
ENSRNOG00000015478	Aicda	100	95.960	ENSSTOG00000010972	AICDA	100	95.960	Ictidomys_tridecemlineatus
ENSRNOG00000015478	Aicda	91	96.685	ENSJJAG00000000908	Aicda	100	96.685	Jaculus_jaculus
ENSRNOG00000015478	Aicda	100	60.302	ENSKMAG00000006359	aicda	100	60.302	Kryptolebias_marmoratus
ENSRNOG00000015478	Aicda	100	55.769	ENSLBEG00000015351	aicda	100	56.667	Labrus_bergylta
ENSRNOG00000015478	Aicda	71	72.857	ENSLACG00000009320	aicda	94	72.857	Latimeria_chalumnae
ENSRNOG00000015478	Aicda	64	64.286	ENSLOCG00000008158	aicda	98	64.286	Lepisosteus_oculatus
ENSRNOG00000015478	Aicda	98	91.282	ENSLAFG00000000721	AICDA	100	91.282	Loxodonta_africana
ENSRNOG00000015478	Aicda	100	95.455	ENSMFAG00000037834	AICDA	100	95.455	Macaca_fascicularis
ENSRNOG00000015478	Aicda	100	95.455	ENSMMUG00000019134	AICDA	100	95.455	Macaca_mulatta
ENSRNOG00000015478	Aicda	100	95.455	ENSMNEG00000043421	AICDA	100	95.455	Macaca_nemestrina
ENSRNOG00000015478	Aicda	100	95.455	ENSMLEG00000040938	AICDA	100	95.455	Mandrillus_leucophaeus
ENSRNOG00000015478	Aicda	74	95.238	ENSMLEG00000039759	-	99	86.391	Mandrillus_leucophaeus
ENSRNOG00000015478	Aicda	100	58.571	ENSMAMG00000020032	aicda	98	58.571	Mastacembelus_armatus
ENSRNOG00000015478	Aicda	98	60.914	ENSMZEG00005016678	aicda	100	60.914	Maylandia_zebra
ENSRNOG00000015478	Aicda	99	87.245	ENSMGAG00000013942	AICDA	100	87.245	Meleagris_gallopavo
ENSRNOG00000015478	Aicda	100	100.000	ENSMAUG00000012229	Aicda	100	100.000	Mesocricetus_auratus
ENSRNOG00000015478	Aicda	100	94.472	ENSMICG00000011695	AICDA	100	94.472	Microcebus_murinus
ENSRNOG00000015478	Aicda	100	97.475	ENSMOCG00000022460	Aicda	100	97.475	Microtus_ochrogaster
ENSRNOG00000015478	Aicda	100	57.143	ENSMMOG00000016707	aicda	98	57.143	Mola_mola
ENSRNOG00000015478	Aicda	97	90.674	ENSMODG00000018002	AICDA	100	90.674	Monodelphis_domestica
ENSRNOG00000015478	Aicda	100	57.143	ENSMALG00000010442	aicda	98	57.143	Monopterus_albus
ENSRNOG00000015478	Aicda	72	99.296	MGP_CAROLIEiJ_G0028824	-	100	99.296	Mus_caroli
ENSRNOG00000015478	Aicda	100	97.980	ENSMUSG00000040627	Aicda	100	97.980	Mus_musculus
ENSRNOG00000015478	Aicda	100	98.990	MGP_PahariEiJ_G0022579	Aicda	100	98.990	Mus_pahari
ENSRNOG00000015478	Aicda	100	97.980	MGP_SPRETEiJ_G0029856	Aicda	100	97.980	Mus_spretus
ENSRNOG00000015478	Aicda	100	95.455	ENSMPUG00000017533	AICDA	94	95.455	Mustela_putorius_furo
ENSRNOG00000015478	Aicda	99	95.408	ENSMLUG00000007881	AICDA	99	95.408	Myotis_lucifugus
ENSRNOG00000015478	Aicda	100	97.475	ENSNGAG00000023430	Aicda	100	97.475	Nannospalax_galili
ENSRNOG00000015478	Aicda	100	57.619	ENSNBRG00000000070	aicda	96	61.053	Neolamprologus_brichardi
ENSRNOG00000015478	Aicda	100	94.444	ENSNLEG00000001917	AICDA	100	94.444	Nomascus_leucogenys
ENSRNOG00000015478	Aicda	99	90.306	ENSMEUG00000006570	AICDA	98	90.306	Notamacropus_eugenii
ENSRNOG00000015478	Aicda	98	90.769	ENSOPRG00000013486	AICDA	100	90.769	Ochotona_princeps
ENSRNOG00000015478	Aicda	98	94.872	ENSODEG00000001235	AICDA	100	95.028	Octodon_degus
ENSRNOG00000015478	Aicda	100	56.667	ENSONIG00000012823	aicda	98	56.667	Oreochromis_niloticus
ENSRNOG00000015478	Aicda	99	95.408	ENSOANG00000007150	AICDA	99	95.408	Ornithorhynchus_anatinus
ENSRNOG00000015478	Aicda	97	94.301	ENSOCUG00000023739	AICDA	100	94.301	Oryctolagus_cuniculus
ENSRNOG00000015478	Aicda	100	59.000	ENSORLG00000011705	aicda	100	59.000	Oryzias_latipes
ENSRNOG00000015478	Aicda	100	59.000	ENSORLG00020006547	aicda	100	59.000	Oryzias_latipes_hni
ENSRNOG00000015478	Aicda	98	59.391	ENSORLG00015012504	aicda	98	59.391	Oryzias_latipes_hsok
ENSRNOG00000015478	Aicda	100	59.000	ENSOMEG00000011880	aicda	98	59.000	Oryzias_melastigma
ENSRNOG00000015478	Aicda	99	96.429	ENSOGAG00000026770	AICDA	99	96.429	Otolemur_garnettii
ENSRNOG00000015478	Aicda	100	89.552	ENSOARG00000001982	AICDA	100	89.552	Ovis_aries
ENSRNOG00000015478	Aicda	100	93.939	ENSPPAG00000038169	AICDA	100	93.939	Pan_paniscus
ENSRNOG00000015478	Aicda	100	94.949	ENSPPRG00000012985	AICDA	100	94.949	Panthera_pardus
ENSRNOG00000015478	Aicda	100	94.949	ENSPTIG00000020074	AICDA	100	94.949	Panthera_tigris_altaica
ENSRNOG00000015478	Aicda	100	94.444	ENSPTRG00000004640	AICDA	100	94.444	Pan_troglodytes
ENSRNOG00000015478	Aicda	100	95.455	ENSPANG00000017883	AICDA	100	95.455	Papio_anubis
ENSRNOG00000015478	Aicda	91	63.158	ENSPKIG00000001499	aicda	100	63.158	Paramormyrops_kingsleyae
ENSRNOG00000015478	Aicda	99	90.816	ENSPSIG00000013283	AICDA	100	90.816	Pelodiscus_sinensis
ENSRNOG00000015478	Aicda	95	60.101	ENSPMGG00000014598	aicda	93	60.302	Periophthalmus_magnuspinnatus
ENSRNOG00000015478	Aicda	100	97.980	ENSPEMG00000008352	Aicda	100	97.980	Peromyscus_maniculatus_bairdii
ENSRNOG00000015478	Aicda	100	90.404	ENSPCIG00000023974	AICDA	100	90.404	Phascolarctos_cinereus
ENSRNOG00000015478	Aicda	90	55.357	ENSPFOG00000011197	aicda	97	55.357	Poecilia_formosa
ENSRNOG00000015478	Aicda	100	55.714	ENSPLAG00000014098	aicda	100	55.714	Poecilia_latipinna
ENSRNOG00000015478	Aicda	100	55.714	ENSPMEG00000024203	aicda	98	55.714	Poecilia_mexicana
ENSRNOG00000015478	Aicda	100	55.714	ENSPREG00000009041	aicda	98	55.714	Poecilia_reticulata
ENSRNOG00000015478	Aicda	99	94.898	ENSPPYG00000004242	AICDA	100	94.898	Pongo_abelii
ENSRNOG00000015478	Aicda	54	92.308	ENSPCAG00000009544	-	54	92.308	Procavia_capensis
ENSRNOG00000015478	Aicda	67	92.537	ENSPCOG00000003380	-	80	92.537	Propithecus_coquereli
ENSRNOG00000015478	Aicda	100	93.939	ENSPVAG00000012185	AICDA	100	93.939	Pteropus_vampyrus
ENSRNOG00000015478	Aicda	98	60.914	ENSPNYG00000000988	aicda	100	60.914	Pundamilia_nyererei
ENSRNOG00000015478	Aicda	100	61.244	ENSPNAG00000019237	aicda	99	61.650	Pygocentrus_nattereri
ENSRNOG00000015478	Aicda	100	95.455	ENSRBIG00000026659	AICDA	100	95.455	Rhinopithecus_bieti
ENSRNOG00000015478	Aicda	100	95.455	ENSRROG00000032866	AICDA	100	95.455	Rhinopithecus_roxellana
ENSRNOG00000015478	Aicda	100	76.263	ENSSBOG00000035758	AICDA	100	76.263	Saimiri_boliviensis_boliviensis
ENSRNOG00000015478	Aicda	100	90.404	ENSSHAG00000008694	AICDA	100	90.404	Sarcophilus_harrisii
ENSRNOG00000015478	Aicda	100	62.319	ENSSFOG00015001695	aicda	98	62.319	Scleropages_formosus
ENSRNOG00000015478	Aicda	99	58.173	ENSSMAG00000012339	aicda	89	58.173	Scophthalmus_maximus
ENSRNOG00000015478	Aicda	99	59.898	ENSSDUG00000009894	aicda	97	59.898	Seriola_dumerili
ENSRNOG00000015478	Aicda	98	60.204	ENSSLDG00000023022	aicda	95	60.204	Seriola_lalandi_dorsalis
ENSRNOG00000015478	Aicda	97	83.420	ENSSPUG00000009022	AICDA	98	83.420	Sphenodon_punctatus
ENSRNOG00000015478	Aicda	100	55.714	ENSSPAG00000021499	aicda	66	55.714	Stegastes_partitus
ENSRNOG00000015478	Aicda	100	93.939	ENSSSCG00000000667	AICDA	100	93.939	Sus_scrofa
ENSRNOG00000015478	Aicda	99	80.612	ENSTGUG00000013115	AICDA	100	80.612	Taeniopygia_guttata
ENSRNOG00000015478	Aicda	99	56.938	ENSTRUG00000007079	aicda	98	56.938	Takifugu_rubripes
ENSRNOG00000015478	Aicda	99	56.667	ENSTNIG00000008118	aicda	98	56.667	Tetraodon_nigroviridis
ENSRNOG00000015478	Aicda	99	64.286	ENSTBEG00000002559	AICDA	100	64.286	Tupaia_belangeri
ENSRNOG00000015478	Aicda	91	93.956	ENSTTRG00000000703	AICDA	100	93.956	Tursiops_truncatus
ENSRNOG00000015478	Aicda	97	94.271	ENSUAMG00000011642	AICDA	98	94.271	Ursus_americanus
ENSRNOG00000015478	Aicda	97	94.271	ENSUMAG00000016540	AICDA	98	94.271	Ursus_maritimus
ENSRNOG00000015478	Aicda	74	91.837	ENSVPAG00000003950	AICDA	100	91.837	Vicugna_pacos
ENSRNOG00000015478	Aicda	99	69.543	ENSXETG00000023905	aicda	98	69.543	Xenopus_tropicalis
ENSRNOG00000015478	Aicda	98	57.143	ENSXCOG00000019386	aicda	90	57.143	Xiphophorus_couchianus
ENSRNOG00000015478	Aicda	98	58.673	ENSXMAG00000011889	aicda	91	58.673	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000178	exosome (RNase complex)	-	IEA	Component
GO:0000178	exosome (RNase complex)	-	ISO	Component
GO:0000932	P-body	21873635.	IBA	Component
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0004126	cytidine deaminase activity	21873635.	IBA	Function
GO:0004126	cytidine deaminase activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0009972	cytidine deamination	-	IEA	Process
GO:0009972	cytidine deamination	-	ISO	Process
GO:0010529	negative regulation of transposition	21873635.	IBA	Process
GO:0016445	somatic diversification of immunoglobulins	-	ISO	Process
GO:0016446	somatic hypermutation of immunoglobulin genes	-	IEA	Process
GO:0016446	somatic hypermutation of immunoglobulin genes	-	ISO	Process
GO:0016554	cytidine to uridine editing	21873635.	IBA	Process
GO:0031625	ubiquitin protein ligase binding	-	IEA	Function
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0033262	regulation of nuclear cell cycle DNA replication	-	IEA	Process
GO:0033262	regulation of nuclear cell cycle DNA replication	-	ISO	Process
GO:0042742	defense response to bacterium	-	IEA	Process
GO:0042742	defense response to bacterium	-	ISO	Process
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0045190	isotype switching	-	IEA	Process
GO:0045190	isotype switching	-	ISO	Process
GO:0045869	negative regulation of single stranded viral RNA replication via double stranded DNA intermediate	21873635.	IBA	Process
GO:0051607	defense response to virus	21873635.	IBA	Process
GO:0070383	DNA cytosine deamination	21873635.	IBA	Process
GO:0071222	cellular response to lipopolysaccharide	-	IEA	Process
GO:0071222	cellular response to lipopolysaccharide	-	ISO	Process
GO:0080111	DNA demethylation	21873635.	IBA	Process
GO:0080111	DNA demethylation	-	ISO	Process
GO:0090310	negative regulation of methylation-dependent chromatin silencing	-	IEA	Process
GO:0090310	negative regulation of methylation-dependent chromatin silencing	-	ISO	Process