EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000015888 (Gene tree)
Gene ID: 307070
Gene Symbol: Larp4b
Alias: LOC307070|Larp5|RGD1310713
Full Name: La ribonucleoprotein domain family%2C member 4B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 48613 bases
Position: chr17:63265407-63314019
Accession: 1310713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000073054	La	PF05383.17	2.1e-14	1	1
ENSRNOP00000055347	La	PF05383.17	2.5e-14	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000077471	-	2477	-	ENSRNOP00000073054	660 (aa)	-	A0A0G2K4I2
ENSRNOT00000058548	-	2214	-	ENSRNOP00000055347	737 (aa)	-	D3ZF45

Gene Model

Click here to download ENSRNOG00000015888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000015888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000015888	Larp4b	100	88.889	ENSG00000107929	LARP4B	100	89.474	Homo_sapiens
ENSRNOG00000015888	Larp4b	93	58.583	ENSAPOG00000020531	LARP4B	99	55.118	Acanthochromis_polyacanthus
ENSRNOG00000015888	Larp4b	100	85.386	ENSAMEG00000001810	LARP4B	99	85.250	Ailuropoda_melanoleuca
ENSRNOG00000015888	Larp4b	93	57.962	ENSAOCG00000007887	-	79	84.768	Amphiprion_ocellaris
ENSRNOG00000015888	Larp4b	98	55.925	ENSAPEG00000002512	LARP4B	98	55.740	Amphiprion_percula
ENSRNOG00000015888	Larp4b	100	54.375	ENSATEG00000012614	LARP4B	99	54.375	Anabas_testudineus
ENSRNOG00000015888	Larp4b	100	76.267	ENSAPLG00000003813	LARP4B	98	76.000	Anas_platyrhynchos
ENSRNOG00000015888	Larp4b	100	73.529	ENSACAG00000002858	LARP4B	99	73.128	Anolis_carolinensis
ENSRNOG00000015888	Larp4b	100	88.482	ENSANAG00000007531	-	99	88.347	Aotus_nancymaae
ENSRNOG00000015888	Larp4b	100	56.488	ENSACLG00000026356	LARP4B	99	56.750	Astatotilapia_calliptera
ENSRNOG00000015888	Larp4b	99	52.148	ENSAMXG00000003335	larp4b	91	54.118	Astyanax_mexicanus
ENSRNOG00000015888	Larp4b	100	82.051	ENSBTAG00000013899	LARP4B	99	81.916	Bos_taurus
ENSRNOG00000015888	Larp4b	100	87.940	ENSCJAG00000018434	LARP4B	99	87.805	Callithrix_jacchus
ENSRNOG00000015888	Larp4b	100	86.468	ENSCAFG00020004209	LARP4B	99	86.333	Canis_lupus_dingo
ENSRNOG00000015888	Larp4b	100	81.781	ENSCHIG00000013543	LARP4B	99	81.646	Capra_hircus
ENSRNOG00000015888	Larp4b	80	91.246	ENSTSYG00000002568	LARP4B	99	91.077	Carlito_syrichta
ENSRNOG00000015888	Larp4b	96	78.822	ENSCAPG00000009725	LARP4B	97	78.401	Cavia_aperea
ENSRNOG00000015888	Larp4b	100	90.379	ENSCPOG00000009375	LARP4B	99	90.244	Cavia_porcellus
ENSRNOG00000015888	Larp4b	100	88.618	ENSCCAG00000024869	LARP4B	99	88.482	Cebus_capucinus
ENSRNOG00000015888	Larp4b	100	89.160	ENSCATG00000019750	LARP4B	99	89.024	Cercocebus_atys
ENSRNOG00000015888	Larp4b	100	89.986	ENSCLAG00000011570	LARP4B	99	89.851	Chinchilla_lanigera
ENSRNOG00000015888	Larp4b	66	88.710	ENSCHOG00000007831	-	66	88.710	Choloepus_hoffmanni
ENSRNOG00000015888	Larp4b	100	75.936	ENSCPBG00000017063	LARP4B	99	75.668	Chrysemys_picta_bellii
ENSRNOG00000015888	Larp4b	100	87.263	ENSCANG00000038021	LARP4B	99	87.127	Colobus_angolensis_palliatus
ENSRNOG00000015888	Larp4b	100	95.135	ENSCGRG00001022930	Larp4b	99	95.606	Cricetulus_griseus_chok1gshd
ENSRNOG00000015888	Larp4b	100	95.135	ENSCGRG00000006022	Larp4b	99	95.606	Cricetulus_griseus_crigri
ENSRNOG00000015888	Larp4b	100	53.236	ENSCSEG00000007342	LARP4B	99	53.369	Cynoglossus_semilaevis
ENSRNOG00000015888	Larp4b	100	54.705	ENSCVAG00000008910	LARP4B	99	55.402	Cyprinodon_variegatus
ENSRNOG00000015888	Larp4b	94	50.691	ENSDARG00000062146	larp4b	90	52.762	Danio_rerio
ENSRNOG00000015888	Larp4b	93	87.120	ENSDNOG00000045543	-	100	89.113	Dasypus_novemcinctus
ENSRNOG00000015888	Larp4b	100	89.039	ENSDORG00000009328	Larp4b	99	90.317	Dipodomys_ordii
ENSRNOG00000015888	Larp4b	85	84.138	ENSETEG00000011249	LARP4B	91	83.793	Echinops_telfairi
ENSRNOG00000015888	Larp4b	100	86.604	ENSEASG00005019068	-	99	86.468	Equus_asinus_asinus
ENSRNOG00000015888	Larp4b	100	86.468	ENSECAG00000024040	LARP4B	99	86.333	Equus_caballus
ENSRNOG00000015888	Larp4b	100	82.345	ENSEEUG00000008391	LARP4B	98	82.210	Erinaceus_europaeus
ENSRNOG00000015888	Larp4b	100	55.860	ENSELUG00000008626	LARP4B	99	55.985	Esox_lucius
ENSRNOG00000015888	Larp4b	89	41.541	ENSELUG00000001417	-	94	41.061	Esox_lucius
ENSRNOG00000015888	Larp4b	100	84.885	ENSFCAG00000000721	-	99	84.750	Felis_catus
ENSRNOG00000015888	Larp4b	100	75.033	ENSFALG00000006961	LARP4B	99	74.766	Ficedula_albicollis
ENSRNOG00000015888	Larp4b	100	90.392	ENSFDAG00000006158	LARP4B	96	90.257	Fukomys_damarensis
ENSRNOG00000015888	Larp4b	100	51.036	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSRNOG00000015888	Larp4b	77	64.160	ENSGMOG00000010818	-	97	53.846	Gadus_morhua
ENSRNOG00000015888	Larp4b	100	75.532	ENSGALG00000006672	LARP4B	99	75.266	Gallus_gallus
ENSRNOG00000015888	Larp4b	100	57.588	ENSGACG00000017535	LARP4B	98	58.495	Gasterosteus_aculeatus
ENSRNOG00000015888	Larp4b	91	77.713	ENSGAGG00000008598	LARP4B	99	77.419	Gopherus_agassizii
ENSRNOG00000015888	Larp4b	100	88.753	ENSGGOG00000003572	LARP4B	99	88.618	Gorilla_gorilla
ENSRNOG00000015888	Larp4b	100	55.654	ENSHBUG00000007535	LARP4B	99	55.905	Haplochromis_burtoni
ENSRNOG00000015888	Larp4b	100	90.688	ENSHGLG00000012936	LARP4B	99	90.553	Heterocephalus_glaber_female
ENSRNOG00000015888	Larp4b	98	72.265	ENSHGLG00100017261	-	100	74.422	Heterocephalus_glaber_male
ENSRNOG00000015888	Larp4b	100	90.798	ENSHGLG00100016220	-	99	90.663	Heterocephalus_glaber_male
ENSRNOG00000015888	Larp4b	100	53.604	ENSHCOG00000011581	LARP4B	89	53.866	Hippocampus_comes
ENSRNOG00000015888	Larp4b	92	52.800	ENSIPUG00000009705	larp4b	90	52.507	Ictalurus_punctatus
ENSRNOG00000015888	Larp4b	100	88.378	ENSSTOG00000000587	LARP4B	99	88.243	Ictidomys_tridecemlineatus
ENSRNOG00000015888	Larp4b	100	91.192	ENSJJAG00000020847	Larp4b	99	91.057	Jaculus_jaculus
ENSRNOG00000015888	Larp4b	100	55.654	ENSKMAG00000021674	LARP4B	99	56.571	Kryptolebias_marmoratus
ENSRNOG00000015888	Larp4b	92	57.504	ENSLBEG00000025293	-	88	55.882	Labrus_bergylta
ENSRNOG00000015888	Larp4b	91	66.134	ENSLACG00000009492	LARP4B	99	65.988	Latimeria_chalumnae
ENSRNOG00000015888	Larp4b	100	65.400	ENSLOCG00000012290	larp4b	99	66.089	Lepisosteus_oculatus
ENSRNOG00000015888	Larp4b	100	86.272	ENSLAFG00000015334	LARP4B	99	86.455	Loxodonta_africana
ENSRNOG00000015888	Larp4b	100	89.431	ENSMFAG00000001766	LARP4B	99	87.263	Macaca_fascicularis
ENSRNOG00000015888	Larp4b	100	89.431	ENSMMUG00000005279	LARP4B	99	89.295	Macaca_mulatta
ENSRNOG00000015888	Larp4b	100	89.295	ENSMNEG00000014019	LARP4B	99	87.263	Macaca_nemestrina
ENSRNOG00000015888	Larp4b	100	89.039	ENSMLEG00000035198	LARP4B	99	88.904	Mandrillus_leucophaeus
ENSRNOG00000015888	Larp4b	100	54.806	ENSMAMG00000013742	LARP4B	99	55.306	Mastacembelus_armatus
ENSRNOG00000015888	Larp4b	83	60.061	ENSMZEG00005014594	-	99	56.438	Maylandia_zebra
ENSRNOG00000015888	Larp4b	92	58.805	ENSMZEG00005006498	-	96	60.514	Maylandia_zebra
ENSRNOG00000015888	Larp4b	100	74.366	ENSMGAG00000005472	LARP4B	99	74.099	Meleagris_gallopavo
ENSRNOG00000015888	Larp4b	100	95.007	ENSMAUG00000021657	Larp4b	99	96.134	Mesocricetus_auratus
ENSRNOG00000015888	Larp4b	100	82.791	ENSMICG00000001301	LARP4B	99	82.791	Microcebus_murinus
ENSRNOG00000015888	Larp4b	90	96.842	ENSMOCG00000021452	Larp4b	99	95.606	Microtus_ochrogaster
ENSRNOG00000015888	Larp4b	81	60.582	ENSMMOG00000011253	-	88	60.743	Mola_mola
ENSRNOG00000015888	Larp4b	100	73.907	ENSMODG00000005957	LARP4B	99	73.775	Monodelphis_domestica
ENSRNOG00000015888	Larp4b	100	48.933	ENSMALG00000012432	LARP4B	99	50.133	Monopterus_albus
ENSRNOG00000015888	Larp4b	100	96.206	MGP_CAROLIEiJ_G0018216	Larp4b	99	96.206	Mus_caroli
ENSRNOG00000015888	Larp4b	100	96.081	ENSMUSG00000033499	Larp4b	99	96.081	Mus_musculus
ENSRNOG00000015888	Larp4b	100	96.070	MGP_PahariEiJ_G0019266	Larp4b	99	96.070	Mus_pahari
ENSRNOG00000015888	Larp4b	100	95.946	MGP_SPRETEiJ_G0019074	Larp4b	99	95.946	Mus_spretus
ENSRNOG00000015888	Larp4b	100	85.115	ENSMPUG00000016220	LARP4B	97	85.115	Mustela_putorius_furo
ENSRNOG00000015888	Larp4b	94	83.357	ENSMLUG00000005880	LARP4B	99	83.357	Myotis_lucifugus
ENSRNOG00000015888	Larp4b	100	90.921	ENSNGAG00000001750	Larp4b	99	90.786	Nannospalax_galili
ENSRNOG00000015888	Larp4b	80	55.016	ENSNBRG00000020018	LARP4B	88	55.340	Neolamprologus_brichardi
ENSRNOG00000015888	Larp4b	100	88.753	ENSNLEG00000013442	LARP4B	99	88.618	Nomascus_leucogenys
ENSRNOG00000015888	Larp4b	83	69.755	ENSMEUG00000013114	-	83	69.482	Notamacropus_eugenii
ENSRNOG00000015888	Larp4b	100	88.188	ENSOPRG00000003300	LARP4B	99	88.054	Ochotona_princeps
ENSRNOG00000015888	Larp4b	100	86.179	ENSODEG00000001109	LARP4B	99	87.302	Octodon_degus
ENSRNOG00000015888	Larp4b	100	57.806	ENSONIG00000017705	LARP4B	99	58.945	Oreochromis_niloticus
ENSRNOG00000015888	Larp4b	100	73.810	ENSOANG00000006100	LARP4B	99	73.677	Ornithorhynchus_anatinus
ENSRNOG00000015888	Larp4b	98	92.000	ENSOCUG00000004950	LARP4B	97	89.225	Oryctolagus_cuniculus
ENSRNOG00000015888	Larp4b	100	53.904	ENSORLG00000006080	LARP4B	99	54.156	Oryzias_latipes
ENSRNOG00000015888	Larp4b	100	53.758	ENSORLG00020020940	LARP4B	99	53.769	Oryzias_latipes_hni
ENSRNOG00000015888	Larp4b	100	54.351	ENSORLG00015020608	LARP4B	99	54.477	Oryzias_latipes_hsok
ENSRNOG00000015888	Larp4b	100	52.806	ENSOMEG00000019619	LARP4B	99	53.121	Oryzias_melastigma
ENSRNOG00000015888	Larp4b	94	85.143	ENSOGAG00000011540	LARP4B	99	85.000	Otolemur_garnettii
ENSRNOG00000015888	Larp4b	100	81.720	ENSOARG00000015320	LARP4B	98	81.586	Ovis_aries
ENSRNOG00000015888	Larp4b	100	88.618	ENSPPAG00000039232	LARP4B	99	88.482	Pan_paniscus
ENSRNOG00000015888	Larp4b	100	85.115	ENSPPRG00000009489	LARP4B	99	84.980	Panthera_pardus
ENSRNOG00000015888	Larp4b	100	84.980	ENSPTIG00000008543	LARP4B	99	84.844	Panthera_tigris_altaica
ENSRNOG00000015888	Larp4b	100	88.618	ENSPTRG00000002235	LARP4B	99	88.482	Pan_troglodytes
ENSRNOG00000015888	Larp4b	100	89.431	ENSPANG00000023546	LARP4B	99	87.398	Papio_anubis
ENSRNOG00000015888	Larp4b	100	56.120	ENSPKIG00000012368	LARP4B	99	56.510	Paramormyrops_kingsleyae
ENSRNOG00000015888	Larp4b	78	85.714	ENSPSIG00000005600	LARP4B	99	85.714	Pelodiscus_sinensis
ENSRNOG00000015888	Larp4b	97	51.827	ENSPMGG00000008261	LARP4B	91	51.827	Periophthalmus_magnuspinnatus
ENSRNOG00000015888	Larp4b	100	95.664	ENSPEMG00000014052	Larp4b	99	95.528	Peromyscus_maniculatus_bairdii
ENSRNOG00000015888	Larp4b	100	54.851	ENSPFOG00000000029	LARP4B	99	55.486	Poecilia_formosa
ENSRNOG00000015888	Larp4b	100	55.150	ENSPLAG00000002871	LARP4B	99	55.671	Poecilia_latipinna
ENSRNOG00000015888	Larp4b	100	54.783	ENSPMEG00000016361	LARP4B	99	55.417	Poecilia_mexicana
ENSRNOG00000015888	Larp4b	100	88.769	ENSPPYG00000002035	LARP4B	97	88.633	Pongo_abelii
ENSRNOG00000015888	Larp4b	100	87.263	ENSPCOG00000014688	LARP4B	99	87.127	Propithecus_coquereli
ENSRNOG00000015888	Larp4b	85	91.429	ENSPVAG00000009784	LARP4B	88	91.429	Pteropus_vampyrus
ENSRNOG00000015888	Larp4b	100	56.036	ENSPNYG00000024252	LARP4B	99	56.336	Pundamilia_nyererei
ENSRNOG00000015888	Larp4b	99	51.917	ENSPNAG00000028956	larp4b	90	54.050	Pygocentrus_nattereri
ENSRNOG00000015888	Larp4b	100	88.889	ENSRBIG00000033294	LARP4B	99	88.753	Rhinopithecus_bieti
ENSRNOG00000015888	Larp4b	100	88.753	ENSRROG00000033879	LARP4B	99	88.618	Rhinopithecus_roxellana
ENSRNOG00000015888	Larp4b	100	83.062	ENSSBOG00000021109	LARP4B	99	82.927	Saimiri_boliviensis_boliviensis
ENSRNOG00000015888	Larp4b	100	75.401	ENSSHAG00000013392	LARP4B	99	75.267	Sarcophilus_harrisii
ENSRNOG00000015888	Larp4b	92	60.254	ENSSFOG00015003256	LARP4B	90	57.257	Scleropages_formosus
ENSRNOG00000015888	Larp4b	82	75.862	ENSSMAG00000005982	-	99	75.862	Scophthalmus_maximus
ENSRNOG00000015888	Larp4b	100	55.387	ENSSDUG00000006704	LARP4B	99	56.429	Seriola_dumerili
ENSRNOG00000015888	Larp4b	84	61.051	ENSSLDG00000020660	LARP4B	95	61.171	Seriola_lalandi_dorsalis
ENSRNOG00000015888	Larp4b	64	98.113	ENSSARG00000001243	-	79	98.113	Sorex_araneus
ENSRNOG00000015888	Larp4b	80	79.932	ENSSPUG00000013734	-	91	79.762	Sphenodon_punctatus
ENSRNOG00000015888	Larp4b	100	73.378	ENSSPUG00000002102	-	99	73.108	Sphenodon_punctatus
ENSRNOG00000015888	Larp4b	100	54.881	ENSSPAG00000014628	LARP4B	99	54.881	Stegastes_partitus
ENSRNOG00000015888	Larp4b	100	81.732	ENSSSCG00000011162	LARP4B	100	84.704	Sus_scrofa
ENSRNOG00000015888	Larp4b	100	75.603	ENSTGUG00000000811	-	99	75.335	Taeniopygia_guttata
ENSRNOG00000015888	Larp4b	100	55.397	ENSTNIG00000004571	-	98	56.662	Tetraodon_nigroviridis
ENSRNOG00000015888	Larp4b	100	54.604	ENSTNIG00000007991	LARP4B	99	55.230	Tetraodon_nigroviridis
ENSRNOG00000015888	Larp4b	90	88.353	ENSTTRG00000011151	LARP4B	90	88.353	Tursiops_truncatus
ENSRNOG00000015888	Larp4b	98	84.308	ENSUAMG00000016461	LARP4B	95	86.957	Ursus_americanus
ENSRNOG00000015888	Larp4b	100	86.198	ENSUMAG00000016127	LARP4B	99	86.062	Ursus_maritimus
ENSRNOG00000015888	Larp4b	57	94.944	ENSVPAG00000000128	-	73	94.944	Vicugna_pacos
ENSRNOG00000015888	Larp4b	100	86.062	ENSVVUG00000008641	LARP4B	100	85.435	Vulpes_vulpes
ENSRNOG00000015888	Larp4b	100	69.733	ENSXETG00000016882	larp4b	100	69.600	Xenopus_tropicalis
ENSRNOG00000015888	Larp4b	100	53.687	ENSXCOG00000019952	LARP4B	68	85.039	Xiphophorus_couchianus
ENSRNOG00000015888	Larp4b	100	54.819	ENSXMAG00000021533	LARP4B	99	55.013	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0010494	cytoplasmic stress granule	-	IEA	Component
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0042788	polysomal ribosome	-	IEA	Component
GO:0042788	polysomal ribosome	-	ISO	Component
GO:0045727	positive regulation of translation	-	IEA	Process
GO:0045727	positive regulation of translation	-	ISO	Process