EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000016015 (Gene tree)
Gene ID: 361109
Gene Symbol: Dcp1a
Alias: LOC361109|RGD1561298|test2
Full Name: decapping mRNA 1A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 45404 bases
Position: chr16:6542216-6587619
Accession: 1561298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000021473	DCP1	PF06058.13	2.1e-41	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000021475	-	5768	-	ENSRNOP00000021473	601 (aa)	-	D4AE80

Gene Model

Click here to download ENSRNOG00000016015's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000016015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000016015	Dcp1a	97	87.479	ENSG00000272886	DCP1A	99	98.020	Homo_sapiens
ENSRNOG00000016015	Dcp1a	97	86.278	ENSAMEG00000007875	DCP1A	100	86.278	Ailuropoda_melanoleuca
ENSRNOG00000016015	Dcp1a	65	57.466	ENSAOCG00000021194	dcp1a	73	56.388	Amphiprion_ocellaris
ENSRNOG00000016015	Dcp1a	65	57.466	ENSAPEG00000012770	dcp1a	79	53.982	Amphiprion_percula
ENSRNOG00000016015	Dcp1a	96	55.987	ENSAPLG00000014921	DCP1A	99	55.987	Anas_platyrhynchos
ENSRNOG00000016015	Dcp1a	97	52.745	ENSACAG00000011028	DCP1A	100	52.912	Anolis_carolinensis
ENSRNOG00000016015	Dcp1a	97	87.136	ENSANAG00000025834	DCP1A	100	87.136	Aotus_nancymaae
ENSRNOG00000016015	Dcp1a	64	56.579	ENSAMXG00000014974	dcp1a	76	57.021	Astyanax_mexicanus
ENSRNOG00000016015	Dcp1a	97	83.877	ENSBTAG00000010863	DCP1A	100	83.362	Bos_taurus
ENSRNOG00000016015	Dcp1a	97	86.621	ENSCJAG00000007337	DCP1A	100	86.621	Callithrix_jacchus
ENSRNOG00000016015	Dcp1a	97	85.420	ENSCAFG00000008637	DCP1A	100	85.420	Canis_familiaris
ENSRNOG00000016015	Dcp1a	98	85.135	ENSCAFG00020004562	DCP1A	99	85.135	Canis_lupus_dingo
ENSRNOG00000016015	Dcp1a	98	83.137	ENSCHIG00000023880	DCP1A	100	82.631	Capra_hircus
ENSRNOG00000016015	Dcp1a	97	86.449	ENSTSYG00000000596	DCP1A	100	86.449	Carlito_syrichta
ENSRNOG00000016015	Dcp1a	100	86.401	ENSCPOG00000000073	DCP1A	100	86.401	Cavia_porcellus
ENSRNOG00000016015	Dcp1a	97	86.792	ENSCCAG00000035664	DCP1A	100	86.792	Cebus_capucinus
ENSRNOG00000016015	Dcp1a	97	87.993	ENSCATG00000044027	DCP1A	100	87.993	Cercocebus_atys
ENSRNOG00000016015	Dcp1a	99	86.877	ENSCLAG00000006913	DCP1A	99	86.877	Chinchilla_lanigera
ENSRNOG00000016015	Dcp1a	97	87.822	ENSCSAG00000013034	DCP1A	100	87.822	Chlorocebus_sabaeus
ENSRNOG00000016015	Dcp1a	89	74.907	ENSCHOG00000006436	DCP1A	100	74.907	Choloepus_hoffmanni
ENSRNOG00000016015	Dcp1a	96	59.191	ENSCPBG00000022400	DCP1A	99	59.191	Chrysemys_picta_bellii
ENSRNOG00000016015	Dcp1a	97	87.479	ENSCANG00000001755	DCP1A	100	87.479	Colobus_angolensis_palliatus
ENSRNOG00000016015	Dcp1a	100	91.362	ENSCGRG00001023753	Dcp1a	100	91.362	Cricetulus_griseus_chok1gshd
ENSRNOG00000016015	Dcp1a	100	91.362	ENSCGRG00000005738	Dcp1a	100	91.362	Cricetulus_griseus_crigri
ENSRNOG00000016015	Dcp1a	63	53.689	ENSCVAG00000001779	dcp1a	72	53.689	Cyprinodon_variegatus
ENSRNOG00000016015	Dcp1a	64	56.466	ENSDARG00000100136	dcp1a	73	56.466	Danio_rerio
ENSRNOG00000016015	Dcp1a	99	72.819	ENSDNOG00000036524	DCP1A	99	72.819	Dasypus_novemcinctus
ENSRNOG00000016015	Dcp1a	98	85.544	ENSDORG00000001396	Dcp1a	99	85.403	Dipodomys_ordii
ENSRNOG00000016015	Dcp1a	68	82.848	ENSETEG00000001601	DCP1A	69	82.848	Echinops_telfairi
ENSRNOG00000016015	Dcp1a	97	85.077	ENSEASG00005014966	DCP1A	100	85.077	Equus_asinus_asinus
ENSRNOG00000016015	Dcp1a	97	85.249	ENSECAG00000024754	DCP1A	100	85.249	Equus_caballus
ENSRNOG00000016015	Dcp1a	92	76.029	ENSEEUG00000009966	DCP1A	100	76.029	Erinaceus_europaeus
ENSRNOG00000016015	Dcp1a	95	42.034	ENSELUG00000013077	dcp1a	99	41.653	Esox_lucius
ENSRNOG00000016015	Dcp1a	97	86.106	ENSFCAG00000003903	DCP1A	100	86.106	Felis_catus
ENSRNOG00000016015	Dcp1a	84	54.423	ENSFALG00000008704	DCP1A	100	54.231	Ficedula_albicollis
ENSRNOG00000016015	Dcp1a	100	86.567	ENSFDAG00000005588	DCP1A	100	86.567	Fukomys_damarensis
ENSRNOG00000016015	Dcp1a	59	52.846	ENSFHEG00000022838	dcp1a	72	52.846	Fundulus_heteroclitus
ENSRNOG00000016015	Dcp1a	97	57.815	ENSGALG00000041547	DCP1A	100	57.983	Gallus_gallus
ENSRNOG00000016015	Dcp1a	92	39.261	ENSGAFG00000019076	dcp1a	96	39.261	Gambusia_affinis
ENSRNOG00000016015	Dcp1a	52	56.140	ENSGACG00000005995	dcp1a	54	56.140	Gasterosteus_aculeatus
ENSRNOG00000016015	Dcp1a	96	58.557	ENSGAGG00000010217	DCP1A	99	58.557	Gopherus_agassizii
ENSRNOG00000016015	Dcp1a	97	86.964	ENSGGOG00000012817	DCP1A	100	86.964	Gorilla_gorilla
ENSRNOG00000016015	Dcp1a	100	85.240	ENSHGLG00000004679	DCP1A	100	85.240	Heterocephalus_glaber_female
ENSRNOG00000016015	Dcp1a	100	85.240	ENSHGLG00100017160	DCP1A	100	85.240	Heterocephalus_glaber_male
ENSRNOG00000016015	Dcp1a	64	58.009	ENSIPUG00000024374	dcp1a	77	58.009	Ictalurus_punctatus
ENSRNOG00000016015	Dcp1a	97	87.650	ENSSTOG00000004632	DCP1A	100	87.650	Ictidomys_tridecemlineatus
ENSRNOG00000016015	Dcp1a	56	54.505	ENSKMAG00000011720	dcp1a	70	53.604	Kryptolebias_marmoratus
ENSRNOG00000016015	Dcp1a	95	48.980	ENSLACG00000013895	DCP1A	98	48.980	Latimeria_chalumnae
ENSRNOG00000016015	Dcp1a	97	45.854	ENSLOCG00000014108	dcp1a	100	45.685	Lepisosteus_oculatus
ENSRNOG00000016015	Dcp1a	99	83.779	ENSLAFG00000005837	DCP1A	100	83.779	Loxodonta_africana
ENSRNOG00000016015	Dcp1a	97	87.993	ENSMFAG00000040374	DCP1A	100	87.993	Macaca_fascicularis
ENSRNOG00000016015	Dcp1a	97	87.993	ENSMMUG00000011208	DCP1A	100	87.993	Macaca_mulatta
ENSRNOG00000016015	Dcp1a	97	87.650	ENSMNEG00000015025	DCP1A	100	87.650	Macaca_nemestrina
ENSRNOG00000016015	Dcp1a	97	88.165	ENSMLEG00000042471	DCP1A	100	88.165	Mandrillus_leucophaeus
ENSRNOG00000016015	Dcp1a	66	54.667	ENSMAMG00000016948	dcp1a	89	63.248	Mastacembelus_armatus
ENSRNOG00000016015	Dcp1a	74	56.444	ENSMZEG00005020706	dcp1a	83	56.444	Maylandia_zebra
ENSRNOG00000016015	Dcp1a	89	55.535	ENSMGAG00000005731	DCP1A	100	55.535	Meleagris_gallopavo
ENSRNOG00000016015	Dcp1a	97	86.106	ENSMICG00000010929	DCP1A	100	86.106	Microcebus_murinus
ENSRNOG00000016015	Dcp1a	97	55.481	ENSMODG00000012554	DCP1A	100	55.481	Monodelphis_domestica
ENSRNOG00000016015	Dcp1a	57	57.778	ENSMALG00000003979	dcp1a	67	57.778	Monopterus_albus
ENSRNOG00000016015	Dcp1a	100	93.854	MGP_CAROLIEiJ_G0019050	Dcp1a	100	93.854	Mus_caroli
ENSRNOG00000016015	Dcp1a	100	94.020	ENSMUSG00000021962	Dcp1a	97	98.830	Mus_musculus
ENSRNOG00000016015	Dcp1a	100	94.186	MGP_PahariEiJ_G0030067	Dcp1a	100	94.186	Mus_pahari
ENSRNOG00000016015	Dcp1a	100	94.020	MGP_SPRETEiJ_G0019935	Dcp1a	100	94.020	Mus_spretus
ENSRNOG00000016015	Dcp1a	100	85.572	ENSMPUG00000016817	DCP1A	100	85.572	Mustela_putorius_furo
ENSRNOG00000016015	Dcp1a	99	80.833	ENSMLUG00000000956	DCP1A	99	80.167	Myotis_lucifugus
ENSRNOG00000016015	Dcp1a	97	87.136	ENSNLEG00000007219	DCP1A	100	87.650	Nomascus_leucogenys
ENSRNOG00000016015	Dcp1a	97	49.402	ENSMEUG00000000054	-	99	49.060	Notamacropus_eugenii
ENSRNOG00000016015	Dcp1a	87	84.351	ENSOPRG00000009919	DCP1A	100	84.351	Ochotona_princeps
ENSRNOG00000016015	Dcp1a	76	54.852	ENSONIG00000001897	dcp1a	83	54.852	Oreochromis_niloticus
ENSRNOG00000016015	Dcp1a	100	85.240	ENSOCUG00000011971	DCP1A	100	85.240	Oryctolagus_cuniculus
ENSRNOG00000016015	Dcp1a	58	56.466	ENSORLG00000003413	dcp1a	69	56.466	Oryzias_latipes
ENSRNOG00000016015	Dcp1a	62	53.101	ENSORLG00020017737	dcp1a	69	56.466	Oryzias_latipes_hni
ENSRNOG00000016015	Dcp1a	58	56.034	ENSORLG00015009618	dcp1a	69	56.034	Oryzias_latipes_hsok
ENSRNOG00000016015	Dcp1a	58	56.087	ENSOMEG00000006207	dcp1a	69	56.087	Oryzias_melastigma
ENSRNOG00000016015	Dcp1a	97	86.449	ENSOGAG00000016915	DCP1A	100	86.449	Otolemur_garnettii
ENSRNOG00000016015	Dcp1a	99	82.587	ENSOARG00000016637	DCP1A	99	82.090	Ovis_aries
ENSRNOG00000016015	Dcp1a	97	87.650	ENSPPAG00000043127	DCP1A	100	87.650	Pan_paniscus
ENSRNOG00000016015	Dcp1a	97	85.763	ENSPPRG00000005751	DCP1A	100	85.763	Panthera_pardus
ENSRNOG00000016015	Dcp1a	97	85.935	ENSPTIG00000012296	DCP1A	100	85.935	Panthera_tigris_altaica
ENSRNOG00000016015	Dcp1a	97	87.650	ENSPTRG00000046314	DCP1A	100	87.650	Pan_troglodytes
ENSRNOG00000016015	Dcp1a	97	87.822	ENSPANG00000011562	DCP1A	100	87.822	Papio_anubis
ENSRNOG00000016015	Dcp1a	97	44.257	ENSPKIG00000024486	dcp1a	84	61.250	Paramormyrops_kingsleyae
ENSRNOG00000016015	Dcp1a	99	57.237	ENSPSIG00000003282	DCP1A	99	58.108	Pelodiscus_sinensis
ENSRNOG00000016015	Dcp1a	97	58.020	ENSPCIG00000002143	DCP1A	100	58.020	Phascolarctos_cinereus
ENSRNOG00000016015	Dcp1a	96	39.078	ENSPFOG00000024583	dcp1a	99	39.078	Poecilia_formosa
ENSRNOG00000016015	Dcp1a	96	39.389	ENSPLAG00000009422	dcp1a	88	38.917	Poecilia_latipinna
ENSRNOG00000016015	Dcp1a	96	39.249	ENSPMEG00000006366	dcp1a	99	39.249	Poecilia_mexicana
ENSRNOG00000016015	Dcp1a	96	38.974	ENSPREG00000000750	dcp1a	99	38.974	Poecilia_reticulata
ENSRNOG00000016015	Dcp1a	97	87.307	ENSPPYG00000013788	DCP1A	100	87.307	Pongo_abelii
ENSRNOG00000016015	Dcp1a	50	94.231	ENSPCAG00000016213	-	54	94.231	Procavia_capensis
ENSRNOG00000016015	Dcp1a	97	86.621	ENSPCOG00000028534	DCP1A	100	86.621	Propithecus_coquereli
ENSRNOG00000016015	Dcp1a	97	85.935	ENSPVAG00000016284	DCP1A	100	85.249	Pteropus_vampyrus
ENSRNOG00000016015	Dcp1a	65	57.806	ENSPNAG00000001685	dcp1a	78	56.846	Pygocentrus_nattereri
ENSRNOG00000016015	Dcp1a	97	87.822	ENSRBIG00000032220	DCP1A	100	87.822	Rhinopithecus_bieti
ENSRNOG00000016015	Dcp1a	97	87.822	ENSRROG00000043106	DCP1A	100	87.822	Rhinopithecus_roxellana
ENSRNOG00000016015	Dcp1a	97	76.329	ENSSBOG00000018181	DCP1A	100	76.329	Saimiri_boliviensis_boliviensis
ENSRNOG00000016015	Dcp1a	89	57.301	ENSSHAG00000017202	DCP1A	94	57.301	Sarcophilus_harrisii
ENSRNOG00000016015	Dcp1a	97	43.993	ENSSFOG00015019471	dcp1a	99	43.655	Scleropages_formosus
ENSRNOG00000016015	Dcp1a	65	56.889	ENSSMAG00000014519	dcp1a	98	39.555	Scophthalmus_maximus
ENSRNOG00000016015	Dcp1a	79	49.032	ENSSDUG00000015866	dcp1a	98	38.261	Seriola_dumerili
ENSRNOG00000016015	Dcp1a	52	48.710	ENSSLDG00000023089	dcp1a	98	37.500	Seriola_lalandi_dorsalis
ENSRNOG00000016015	Dcp1a	96	79.310	ENSSARG00000000970	DCP1A	99	80.345	Sorex_araneus
ENSRNOG00000016015	Dcp1a	66	55.804	ENSSPAG00000006215	dcp1a	86	55.804	Stegastes_partitus
ENSRNOG00000016015	Dcp1a	97	84.220	ENSSSCG00000022616	DCP1A	100	84.220	Sus_scrofa
ENSRNOG00000016015	Dcp1a	89	56.934	ENSTGUG00000006820	DCP1A	100	56.752	Taeniopygia_guttata
ENSRNOG00000016015	Dcp1a	95	38.927	ENSTRUG00000003429	dcp1a	97	45.912	Takifugu_rubripes
ENSRNOG00000016015	Dcp1a	89	78.333	ENSTBEG00000012697	DCP1A	100	78.333	Tupaia_belangeri
ENSRNOG00000016015	Dcp1a	97	86.621	ENSUAMG00000007386	DCP1A	99	86.621	Ursus_americanus
ENSRNOG00000016015	Dcp1a	100	85.904	ENSUMAG00000020222	DCP1A	100	85.904	Ursus_maritimus
ENSRNOG00000016015	Dcp1a	85	89.286	ENSVPAG00000002194	DCP1A	88	89.286	Vicugna_pacos
ENSRNOG00000016015	Dcp1a	97	85.592	ENSVVUG00000023423	DCP1A	100	85.592	Vulpes_vulpes
ENSRNOG00000016015	Dcp1a	89	46.852	ENSXETG00000015662	dcp1a	100	46.691	Xenopus_tropicalis
ENSRNOG00000016015	Dcp1a	96	39.182	ENSXMAG00000028395	dcp1a	99	39.182	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0000932	P-body	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0008047	enzyme activator activity	-	IEA	Function
GO:0019894	kinesin binding	23487039.	IDA	Function
GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0036464	cytoplasmic ribonucleoprotein granule	-	ISO	Component
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043085	positive regulation of catalytic activity	-	IEA	Process
GO:1903608	protein localization to cytoplasmic stress granule	-	IEA	Process
GO:1903608	protein localization to cytoplasmic stress granule	-	ISO	Process