EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000016016 (Gene tree)
Gene ID: 679898
Gene Symbol: Zmat2
Alias: LOC679898
Full Name: zinc finger%2C matrin type 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4781 bases
Position: chr18:29639872-29644652
Accession: 1583592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000021516	zf-U1	PF06220.12	0.00027	1	1
ENSRNOP00000021516	zf-met	PF12874.7	2.7e-06	1	1
ENSRNOP00000021516	zf-C2H2_jaz	PF12171.8	1.4e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000021516	-	1954	-	ENSRNOP00000021516	199 (aa)	-	D4AD01

Gene Model

Click here to download ENSRNOG00000016016's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000016016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000016016	Zmat2	100	99.497	ENSG00000146007	ZMAT2	100	100.000	Homo_sapiens
ENSRNOG00000016016	Zmat2	100	87.562	ENSAPOG00000004818	zmat2	100	87.562	Acanthochromis_polyacanthus
ENSRNOG00000016016	Zmat2	100	99.497	ENSAMEG00000010766	ZMAT2	100	99.497	Ailuropoda_melanoleuca
ENSRNOG00000016016	Zmat2	99	87.879	ENSACIG00000007914	zmat2	99	87.879	Amphilophus_citrinellus
ENSRNOG00000016016	Zmat2	100	87.562	ENSAOCG00000016267	zmat2	100	87.562	Amphiprion_ocellaris
ENSRNOG00000016016	Zmat2	100	87.562	ENSAPEG00000008887	zmat2	100	87.562	Amphiprion_percula
ENSRNOG00000016016	Zmat2	100	88.557	ENSATEG00000009724	zmat2	100	88.557	Anabas_testudineus
ENSRNOG00000016016	Zmat2	100	97.487	ENSACAG00000012747	ZMAT2	100	97.487	Anolis_carolinensis
ENSRNOG00000016016	Zmat2	100	99.497	ENSANAG00000028921	ZMAT2	100	99.497	Aotus_nancymaae
ENSRNOG00000016016	Zmat2	65	74.242	ENSACLG00000015635	-	94	74.242	Astatotilapia_calliptera
ENSRNOG00000016016	Zmat2	100	87.065	ENSACLG00000000982	zmat2	100	87.065	Astatotilapia_calliptera
ENSRNOG00000016016	Zmat2	100	87.065	ENSACLG00000001243	zmat2	100	87.065	Astatotilapia_calliptera
ENSRNOG00000016016	Zmat2	100	92.462	ENSAMXG00000042537	zmat2	100	92.462	Astyanax_mexicanus
ENSRNOG00000016016	Zmat2	100	99.497	ENSBTAG00000005441	ZMAT2	100	99.497	Bos_taurus
ENSRNOG00000016016	Zmat2	100	97.990	ENSCJAG00000021456	-	100	97.990	Callithrix_jacchus
ENSRNOG00000016016	Zmat2	100	99.497	ENSCJAG00000016231	-	100	99.497	Callithrix_jacchus
ENSRNOG00000016016	Zmat2	100	99.497	ENSCAFG00000005907	ZMAT2	100	99.497	Canis_familiaris
ENSRNOG00000016016	Zmat2	100	99.497	ENSCAFG00020000423	ZMAT2	100	99.497	Canis_lupus_dingo
ENSRNOG00000016016	Zmat2	97	99.482	ENSCHIG00000014775	ZMAT2	97	99.482	Capra_hircus
ENSRNOG00000016016	Zmat2	100	79.899	ENSTSYG00000032797	-	100	79.899	Carlito_syrichta
ENSRNOG00000016016	Zmat2	100	99.497	ENSTSYG00000035442	-	100	99.497	Carlito_syrichta
ENSRNOG00000016016	Zmat2	100	98.995	ENSCPOG00000037729	ZMAT2	100	98.995	Cavia_porcellus
ENSRNOG00000016016	Zmat2	100	99.497	ENSCCAG00000024723	ZMAT2	100	99.497	Cebus_capucinus
ENSRNOG00000016016	Zmat2	100	99.497	ENSCLAG00000017314	ZMAT2	100	99.497	Chinchilla_lanigera
ENSRNOG00000016016	Zmat2	100	99.497	ENSCSAG00000012639	ZMAT2	100	99.497	Chlorocebus_sabaeus
ENSRNOG00000016016	Zmat2	78	91.026	ENSCHOG00000007795	ZMAT2	93	95.890	Choloepus_hoffmanni
ENSRNOG00000016016	Zmat2	100	97.990	ENSCPBG00000007718	ZMAT2	100	97.990	Chrysemys_picta_bellii
ENSRNOG00000016016	Zmat2	54	65.741	ENSCING00000016227	-	99	65.741	Ciona_intestinalis
ENSRNOG00000016016	Zmat2	75	72.368	ENSCSAVG00000008239	-	94	66.842	Ciona_savignyi
ENSRNOG00000016016	Zmat2	100	99.497	ENSCANG00000039567	ZMAT2	100	99.497	Colobus_angolensis_palliatus
ENSRNOG00000016016	Zmat2	100	99.497	ENSCGRG00001023749	Zmat2	100	99.497	Cricetulus_griseus_chok1gshd
ENSRNOG00000016016	Zmat2	100	99.497	ENSCGRG00000013756	Zmat2	100	99.497	Cricetulus_griseus_crigri
ENSRNOG00000016016	Zmat2	100	85.572	ENSCSEG00000006694	zmat2	91	85.572	Cynoglossus_semilaevis
ENSRNOG00000016016	Zmat2	100	88.060	ENSCVAG00000003489	zmat2	100	88.060	Cyprinodon_variegatus
ENSRNOG00000016016	Zmat2	100	90.452	ENSDARG00000004956	zmat2	100	90.452	Danio_rerio
ENSRNOG00000016016	Zmat2	62	99.187	ENSDNOG00000015171	ZMAT2	100	99.187	Dasypus_novemcinctus
ENSRNOG00000016016	Zmat2	100	77.387	ENSDORG00000014559	Zmat2	100	72.864	Dipodomys_ordii
ENSRNOG00000016016	Zmat2	94	64.398	FBgn0035520	CG11586	96	68.063	Drosophila_melanogaster
ENSRNOG00000016016	Zmat2	100	97.487	ENSETEG00000005406	-	100	97.487	Echinops_telfairi
ENSRNOG00000016016	Zmat2	58	73.043	ENSEBUG00000015463	-	65	71.429	Eptatretus_burgeri
ENSRNOG00000016016	Zmat2	100	99.497	ENSEASG00005018047	ZMAT2	100	99.497	Equus_asinus_asinus
ENSRNOG00000016016	Zmat2	100	99.497	ENSECAG00000014412	ZMAT2	100	99.497	Equus_caballus
ENSRNOG00000016016	Zmat2	76	100.000	ENSEEUG00000007861	ZMAT2	100	100.000	Erinaceus_europaeus
ENSRNOG00000016016	Zmat2	97	90.206	ENSELUG00000021857	zmat2	99	88.780	Esox_lucius
ENSRNOG00000016016	Zmat2	100	99.497	ENSFCAG00000001289	ZMAT2	100	99.497	Felis_catus
ENSRNOG00000016016	Zmat2	100	88.442	ENSFALG00000014244	-	100	88.442	Ficedula_albicollis
ENSRNOG00000016016	Zmat2	98	97.436	ENSFALG00000008988	-	98	97.436	Ficedula_albicollis
ENSRNOG00000016016	Zmat2	100	99.497	ENSFDAG00000008372	ZMAT2	100	99.497	Fukomys_damarensis
ENSRNOG00000016016	Zmat2	100	87.562	ENSFHEG00000016999	zmat2	100	87.562	Fundulus_heteroclitus
ENSRNOG00000016016	Zmat2	76	88.387	ENSGMOG00000003032	zmat2	99	88.235	Gadus_morhua
ENSRNOG00000016016	Zmat2	100	97.487	ENSGALG00000041746	ZMAT2	100	97.487	Gallus_gallus
ENSRNOG00000016016	Zmat2	100	87.065	ENSGAFG00000009807	zmat2	100	87.065	Gambusia_affinis
ENSRNOG00000016016	Zmat2	100	88.060	ENSGACG00000020892	zmat2	100	88.060	Gasterosteus_aculeatus
ENSRNOG00000016016	Zmat2	100	96.985	ENSGAGG00000008849	ZMAT2	100	96.985	Gopherus_agassizii
ENSRNOG00000016016	Zmat2	100	99.497	ENSGGOG00000005121	ZMAT2	100	99.497	Gorilla_gorilla
ENSRNOG00000016016	Zmat2	100	78.218	ENSHBUG00000019195	zmat2	100	78.218	Haplochromis_burtoni
ENSRNOG00000016016	Zmat2	99	80.193	ENSHBUG00000021112	-	99	80.193	Haplochromis_burtoni
ENSRNOG00000016016	Zmat2	75	75.658	ENSHBUG00000021068	-	91	77.348	Haplochromis_burtoni
ENSRNOG00000016016	Zmat2	100	98.995	ENSHGLG00000008187	-	100	98.995	Heterocephalus_glaber_female
ENSRNOG00000016016	Zmat2	100	98.995	ENSHGLG00100002997	-	100	98.995	Heterocephalus_glaber_male
ENSRNOG00000016016	Zmat2	100	86.567	ENSHCOG00000002199	zmat2	90	86.567	Hippocampus_comes
ENSRNOG00000016016	Zmat2	100	89.950	ENSIPUG00000024080	Zmat2	100	89.950	Ictalurus_punctatus
ENSRNOG00000016016	Zmat2	100	99.497	ENSSTOG00000002025	ZMAT2	100	99.497	Ictidomys_tridecemlineatus
ENSRNOG00000016016	Zmat2	100	98.995	ENSJJAG00000003703	-	100	98.995	Jaculus_jaculus
ENSRNOG00000016016	Zmat2	100	87.065	ENSKMAG00000005411	zmat2	100	87.065	Kryptolebias_marmoratus
ENSRNOG00000016016	Zmat2	100	86.567	ENSLBEG00000002013	zmat2	100	86.567	Labrus_bergylta
ENSRNOG00000016016	Zmat2	100	93.970	ENSLACG00000001030	ZMAT2	100	93.970	Latimeria_chalumnae
ENSRNOG00000016016	Zmat2	100	92.462	ENSLOCG00000011219	zmat2	85	92.462	Lepisosteus_oculatus
ENSRNOG00000016016	Zmat2	100	99.497	ENSLAFG00000018601	ZMAT2	100	99.497	Loxodonta_africana
ENSRNOG00000016016	Zmat2	100	99.497	ENSMFAG00000037329	ZMAT2	100	99.497	Macaca_fascicularis
ENSRNOG00000016016	Zmat2	100	99.497	ENSMMUG00000004484	ZMAT2	100	99.497	Macaca_mulatta
ENSRNOG00000016016	Zmat2	100	99.497	ENSMNEG00000031600	ZMAT2	100	99.497	Macaca_nemestrina
ENSRNOG00000016016	Zmat2	100	99.497	ENSMLEG00000041320	ZMAT2	100	99.497	Mandrillus_leucophaeus
ENSRNOG00000016016	Zmat2	100	87.562	ENSMAMG00000022430	zmat2	100	87.562	Mastacembelus_armatus
ENSRNOG00000016016	Zmat2	100	87.065	ENSMZEG00005027828	zmat2	100	87.065	Maylandia_zebra
ENSRNOG00000016016	Zmat2	100	85.075	ENSMZEG00005001274	-	100	85.075	Maylandia_zebra
ENSRNOG00000016016	Zmat2	99	96.465	ENSMGAG00000000843	ZMAT2	99	96.465	Meleagris_gallopavo
ENSRNOG00000016016	Zmat2	100	75.862	ENSMAUG00000016579	Zmat2	100	76.355	Mesocricetus_auratus
ENSRNOG00000016016	Zmat2	100	99.497	ENSMICG00000042843	ZMAT2	100	99.497	Microcebus_murinus
ENSRNOG00000016016	Zmat2	100	94.472	ENSMOCG00000012659	Zmat2	100	94.472	Microtus_ochrogaster
ENSRNOG00000016016	Zmat2	100	88.060	ENSMMOG00000016831	zmat2	100	88.060	Mola_mola
ENSRNOG00000016016	Zmat2	100	98.995	ENSMODG00000011269	-	100	98.995	Monodelphis_domestica
ENSRNOG00000016016	Zmat2	100	98.492	ENSMODG00000011277	-	100	98.492	Monodelphis_domestica
ENSRNOG00000016016	Zmat2	99	88.000	ENSMALG00000009668	zmat2	99	88.000	Monopterus_albus
ENSRNOG00000016016	Zmat2	100	99.497	MGP_CAROLIEiJ_G0022140	Zmat2	100	99.497	Mus_caroli
ENSRNOG00000016016	Zmat2	100	99.497	ENSMUSG00000001383	Zmat2	100	99.497	Mus_musculus
ENSRNOG00000016016	Zmat2	100	99.497	MGP_PahariEiJ_G0018874	Zmat2	100	99.497	Mus_pahari
ENSRNOG00000016016	Zmat2	100	99.497	MGP_SPRETEiJ_G0023052	Zmat2	100	99.497	Mus_spretus
ENSRNOG00000016016	Zmat2	100	99.497	ENSMPUG00000008383	ZMAT2	100	99.497	Mustela_putorius_furo
ENSRNOG00000016016	Zmat2	100	97.990	ENSMLUG00000017525	ZMAT2	100	97.990	Myotis_lucifugus
ENSRNOG00000016016	Zmat2	100	98.995	ENSNGAG00000009406	Zmat2	100	98.995	Nannospalax_galili
ENSRNOG00000016016	Zmat2	100	87.065	ENSNBRG00000017902	zmat2	100	87.065	Neolamprologus_brichardi
ENSRNOG00000016016	Zmat2	86	70.175	ENSNLEG00000009450	-	95	62.573	Nomascus_leucogenys
ENSRNOG00000016016	Zmat2	76	99.342	ENSMEUG00000001757	ZMAT2	100	99.342	Notamacropus_eugenii
ENSRNOG00000016016	Zmat2	100	99.497	ENSODEG00000002444	ZMAT2	100	99.497	Octodon_degus
ENSRNOG00000016016	Zmat2	100	86.139	ENSONIG00000017873	zmat2	100	86.139	Oreochromis_niloticus
ENSRNOG00000016016	Zmat2	86	98.837	ENSOANG00000007213	ZMAT2	100	98.837	Ornithorhynchus_anatinus
ENSRNOG00000016016	Zmat2	100	99.497	ENSOCUG00000004255	ZMAT2	100	99.497	Oryctolagus_cuniculus
ENSRNOG00000016016	Zmat2	100	88.060	ENSORLG00000024293	zmat2	100	88.060	Oryzias_latipes
ENSRNOG00000016016	Zmat2	100	88.060	ENSORLG00020003239	zmat2	100	88.060	Oryzias_latipes_hni
ENSRNOG00000016016	Zmat2	100	87.562	ENSORLG00015007715	zmat2	100	87.562	Oryzias_latipes_hsok
ENSRNOG00000016016	Zmat2	100	87.562	ENSOMEG00000017427	zmat2	93	87.562	Oryzias_melastigma
ENSRNOG00000016016	Zmat2	100	99.497	ENSOGAG00000002054	ZMAT2	100	99.497	Otolemur_garnettii
ENSRNOG00000016016	Zmat2	100	99.497	ENSOARG00000018690	ZMAT2	100	99.497	Ovis_aries
ENSRNOG00000016016	Zmat2	100	99.497	ENSPPAG00000034165	ZMAT2	100	99.497	Pan_paniscus
ENSRNOG00000016016	Zmat2	100	99.497	ENSPPRG00000004163	ZMAT2	100	99.497	Panthera_pardus
ENSRNOG00000016016	Zmat2	100	99.497	ENSPTIG00000008652	ZMAT2	100	99.497	Panthera_tigris_altaica
ENSRNOG00000016016	Zmat2	100	99.497	ENSPTRG00000017327	ZMAT2	100	99.497	Pan_troglodytes
ENSRNOG00000016016	Zmat2	100	90.955	ENSPANG00000032021	ZMAT2	100	89.950	Papio_anubis
ENSRNOG00000016016	Zmat2	100	91.457	ENSPKIG00000017778	zmat2	100	91.457	Paramormyrops_kingsleyae
ENSRNOG00000016016	Zmat2	62	96.748	ENSPSIG00000003832	ZMAT2	100	96.748	Pelodiscus_sinensis
ENSRNOG00000016016	Zmat2	100	86.432	ENSPMGG00000005845	zmat2	100	86.432	Periophthalmus_magnuspinnatus
ENSRNOG00000016016	Zmat2	100	98.995	ENSPEMG00000010300	Zmat2	100	98.995	Peromyscus_maniculatus_bairdii
ENSRNOG00000016016	Zmat2	100	98.995	ENSPCIG00000021080	ZMAT2	100	98.995	Phascolarctos_cinereus
ENSRNOG00000016016	Zmat2	100	87.562	ENSPFOG00000002482	zmat2	100	87.562	Poecilia_formosa
ENSRNOG00000016016	Zmat2	100	88.060	ENSPLAG00000019239	zmat2	100	88.060	Poecilia_latipinna
ENSRNOG00000016016	Zmat2	100	87.562	ENSPMEG00000024343	zmat2	100	87.562	Poecilia_mexicana
ENSRNOG00000016016	Zmat2	52	85.714	ENSPREG00000001359	zmat2	51	85.714	Poecilia_reticulata
ENSRNOG00000016016	Zmat2	100	99.497	ENSPPYG00000015866	ZMAT2	100	99.497	Pongo_abelii
ENSRNOG00000016016	Zmat2	100	99.497	ENSPCAG00000001604	ZMAT2	100	99.497	Procavia_capensis
ENSRNOG00000016016	Zmat2	100	99.497	ENSPCOG00000020829	ZMAT2	100	99.497	Propithecus_coquereli
ENSRNOG00000016016	Zmat2	100	99.497	ENSPVAG00000009717	ZMAT2	100	99.497	Pteropus_vampyrus
ENSRNOG00000016016	Zmat2	100	87.065	ENSPNYG00000022503	zmat2	100	87.065	Pundamilia_nyererei
ENSRNOG00000016016	Zmat2	100	91.960	ENSPNAG00000013716	zmat2	100	91.960	Pygocentrus_nattereri
ENSRNOG00000016016	Zmat2	100	99.497	ENSRBIG00000031072	ZMAT2	100	99.497	Rhinopithecus_bieti
ENSRNOG00000016016	Zmat2	100	99.497	ENSRROG00000032700	ZMAT2	100	99.497	Rhinopithecus_roxellana
ENSRNOG00000016016	Zmat2	100	99.497	ENSSBOG00000025911	ZMAT2	100	99.497	Saimiri_boliviensis_boliviensis
ENSRNOG00000016016	Zmat2	100	98.995	ENSSHAG00000016524	ZMAT2	100	98.995	Sarcophilus_harrisii
ENSRNOG00000016016	Zmat2	100	90.955	ENSSFOG00015022982	zmat2	100	90.955	Scleropages_formosus
ENSRNOG00000016016	Zmat2	100	88.060	ENSSMAG00000011152	zmat2	100	88.060	Scophthalmus_maximus
ENSRNOG00000016016	Zmat2	100	88.060	ENSSDUG00000023365	zmat2	100	88.060	Seriola_dumerili
ENSRNOG00000016016	Zmat2	100	88.060	ENSSLDG00000008752	zmat2	100	88.060	Seriola_lalandi_dorsalis
ENSRNOG00000016016	Zmat2	100	98.995	ENSSARG00000005898	ZMAT2	100	98.995	Sorex_araneus
ENSRNOG00000016016	Zmat2	100	97.990	ENSSPUG00000000256	ZMAT2	100	97.990	Sphenodon_punctatus
ENSRNOG00000016016	Zmat2	100	87.562	ENSSPAG00000011593	zmat2	100	87.562	Stegastes_partitus
ENSRNOG00000016016	Zmat2	100	98.995	ENSSSCG00000029158	ZMAT2	100	98.995	Sus_scrofa
ENSRNOG00000016016	Zmat2	100	95.477	ENSTGUG00000001696	ZMAT2	100	95.477	Taeniopygia_guttata
ENSRNOG00000016016	Zmat2	100	87.562	ENSTRUG00000008262	zmat2	100	87.562	Takifugu_rubripes
ENSRNOG00000016016	Zmat2	100	86.567	ENSTNIG00000007599	zmat2	100	86.567	Tetraodon_nigroviridis
ENSRNOG00000016016	Zmat2	100	74.874	ENSTTRG00000001777	ZMAT2	100	74.874	Tursiops_truncatus
ENSRNOG00000016016	Zmat2	77	96.078	ENSUAMG00000004654	ZMAT2	80	96.078	Ursus_americanus
ENSRNOG00000016016	Zmat2	100	99.497	ENSUMAG00000012852	ZMAT2	100	99.497	Ursus_maritimus
ENSRNOG00000016016	Zmat2	61	94.262	ENSVPAG00000002463	ZMAT2	61	94.262	Vicugna_pacos
ENSRNOG00000016016	Zmat2	100	99.497	ENSVVUG00000017308	ZMAT2	100	99.497	Vulpes_vulpes
ENSRNOG00000016016	Zmat2	100	72.864	ENSXETG00000016118	zmat2	100	72.864	Xenopus_tropicalis
ENSRNOG00000016016	Zmat2	100	86.500	ENSXMAG00000024441	zmat2	100	86.500	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046540	U4/U6 x U5 tri-snRNP complex	21873635.	IBA	Component
GO:0071005	U2-type precatalytic spliceosome	-	IEA	Component
GO:0071005	U2-type precatalytic spliceosome	-	ISO	Component