EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000016121 (Gene tree)
Gene ID: 315769
Gene Symbol: Trip4
Alias: LOC315769|MGC188852
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 162090 bases
Position: chr8:71371370-71533459
Accession: 1306838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000021863	ASCH	PF04266.14	1.7e-18	1	1
ENSRNOP00000071531	ASCH	PF04266.14	2.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000085745	-	4078	XM_008766281	ENSRNOP00000071531	682 (aa)	XP_008764503	A0A0G2K0P5
ENSRNOT00000021863	-	2807	XM_008766280	ENSRNOP00000021863	581 (aa)	XP_008764506	B5DEP5

Gene Model

Click here to download ENSRNOG00000016121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000016121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000016121	Trip4	100	88.640	ENSG00000103671	TRIP4	100	88.640	Homo_sapiens
ENSRNOG00000016121	Trip4	95	45.975	ENSAPOG00000023326	trip4	97	45.975	Acanthochromis_polyacanthus
ENSRNOG00000016121	Trip4	100	85.026	ENSAMEG00000002591	TRIP4	100	85.026	Ailuropoda_melanoleuca
ENSRNOG00000016121	Trip4	95	51.687	ENSACIG00000010577	trip4	97	51.687	Amphilophus_citrinellus
ENSRNOG00000016121	Trip4	96	52.548	ENSAOCG00000000395	trip4	96	53.251	Amphiprion_ocellaris
ENSRNOG00000016121	Trip4	97	57.366	ENSAPEG00000003621	trip4	99	58.059	Amphiprion_percula
ENSRNOG00000016121	Trip4	97	58.435	ENSATEG00000019577	trip4	99	58.783	Anabas_testudineus
ENSRNOG00000016121	Trip4	99	68.954	ENSAPLG00000004612	TRIP4	99	68.954	Anas_platyrhynchos
ENSRNOG00000016121	Trip4	98	68.284	ENSACAG00000007077	TRIP4	90	68.804	Anolis_carolinensis
ENSRNOG00000016121	Trip4	100	86.575	ENSANAG00000027612	TRIP4	100	86.575	Aotus_nancymaae
ENSRNOG00000016121	Trip4	97	59.756	ENSACLG00000013819	trip4	99	59.756	Astatotilapia_calliptera
ENSRNOG00000016121	Trip4	97	59.549	ENSAMXG00000007270	trip4	99	59.896	Astyanax_mexicanus
ENSRNOG00000016121	Trip4	99	83.993	ENSBTAG00000014493	TRIP4	99	83.993	Bos_taurus
ENSRNOG00000016121	Trip4	100	86.403	ENSCJAG00000005107	TRIP4	100	86.403	Callithrix_jacchus
ENSRNOG00000016121	Trip4	100	85.026	ENSCAFG00000017091	TRIP4	100	85.026	Canis_familiaris
ENSRNOG00000016121	Trip4	100	85.026	ENSCAFG00020008960	TRIP4	100	85.026	Canis_lupus_dingo
ENSRNOG00000016121	Trip4	97	83.452	ENSCHIG00000023818	TRIP4	98	83.452	Capra_hircus
ENSRNOG00000016121	Trip4	100	86.575	ENSTSYG00000007185	TRIP4	100	86.575	Carlito_syrichta
ENSRNOG00000016121	Trip4	70	76.271	ENSCAPG00000017624	TRIP4	92	76.027	Cavia_aperea
ENSRNOG00000016121	Trip4	100	86.747	ENSCPOG00000006483	TRIP4	100	86.747	Cavia_porcellus
ENSRNOG00000016121	Trip4	100	81.411	ENSCCAG00000026483	TRIP4	100	81.411	Cebus_capucinus
ENSRNOG00000016121	Trip4	100	88.468	ENSCATG00000041144	TRIP4	100	88.468	Cercocebus_atys
ENSRNOG00000016121	Trip4	100	86.919	ENSCLAG00000006872	TRIP4	100	86.919	Chinchilla_lanigera
ENSRNOG00000016121	Trip4	100	88.296	ENSCSAG00000012499	TRIP4	100	88.296	Chlorocebus_sabaeus
ENSRNOG00000016121	Trip4	82	78.788	ENSCHOG00000010776	TRIP4	82	78.788	Choloepus_hoffmanni
ENSRNOG00000016121	Trip4	97	67.430	ENSCPBG00000006093	TRIP4	99	67.430	Chrysemys_picta_bellii
ENSRNOG00000016121	Trip4	98	41.764	ENSCSAVG00000005293	-	99	41.764	Ciona_savignyi
ENSRNOG00000016121	Trip4	100	84.854	ENSCANG00000033593	TRIP4	100	84.854	Colobus_angolensis_palliatus
ENSRNOG00000016121	Trip4	100	93.460	ENSCGRG00001021158	Trip4	100	93.460	Cricetulus_griseus_chok1gshd
ENSRNOG00000016121	Trip4	91	90.714	ENSCGRG00000002340	Trip4	100	90.714	Cricetulus_griseus_crigri
ENSRNOG00000016121	Trip4	97	57.886	ENSCSEG00000009015	trip4	98	57.886	Cynoglossus_semilaevis
ENSRNOG00000016121	Trip4	89	56.203	ENSCVAG00000021094	-	90	56.203	Cyprinodon_variegatus
ENSRNOG00000016121	Trip4	90	56.052	ENSCVAG00000020984	trip4	99	56.052	Cyprinodon_variegatus
ENSRNOG00000016121	Trip4	97	58.537	ENSDARG00000098074	trip4	99	59.233	Danio_rerio
ENSRNOG00000016121	Trip4	100	85.198	ENSDNOG00000008654	TRIP4	100	85.198	Dasypus_novemcinctus
ENSRNOG00000016121	Trip4	100	86.747	ENSDORG00000014914	Trip4	100	86.747	Dipodomys_ordii
ENSRNOG00000016121	Trip4	74	38.128	FBgn0031115	CG11710	80	38.128	Drosophila_melanogaster
ENSRNOG00000016121	Trip4	100	79.522	ENSETEG00000001597	TRIP4	100	79.522	Echinops_telfairi
ENSRNOG00000016121	Trip4	98	47.521	ENSEBUG00000009039	trip4	99	47.945	Eptatretus_burgeri
ENSRNOG00000016121	Trip4	100	85.714	ENSEASG00005006538	TRIP4	100	85.714	Equus_asinus_asinus
ENSRNOG00000016121	Trip4	93	82.721	ENSECAG00000024689	TRIP4	99	82.721	Equus_caballus
ENSRNOG00000016121	Trip4	80	82.199	ENSEEUG00000007741	TRIP4	80	82.199	Erinaceus_europaeus
ENSRNOG00000016121	Trip4	98	56.432	ENSELUG00000022449	trip4	99	56.432	Esox_lucius
ENSRNOG00000016121	Trip4	100	86.231	ENSFCAG00000010618	TRIP4	100	86.231	Felis_catus
ENSRNOG00000016121	Trip4	99	67.067	ENSFALG00000009816	TRIP4	99	67.238	Ficedula_albicollis
ENSRNOG00000016121	Trip4	100	86.231	ENSFDAG00000017051	TRIP4	100	86.231	Fukomys_damarensis
ENSRNOG00000016121	Trip4	97	57.612	ENSFHEG00000015795	trip4	99	57.612	Fundulus_heteroclitus
ENSRNOG00000016121	Trip4	97	56.348	ENSGMOG00000008455	trip4	99	56.348	Gadus_morhua
ENSRNOG00000016121	Trip4	100	68.143	ENSGALG00000030672	TRIP4	99	68.924	Gallus_gallus
ENSRNOG00000016121	Trip4	97	57.931	ENSGAFG00000003491	trip4	99	57.931	Gambusia_affinis
ENSRNOG00000016121	Trip4	98	56.552	ENSGACG00000016986	trip4	99	56.250	Gasterosteus_aculeatus
ENSRNOG00000016121	Trip4	81	69.263	ENSGAGG00000003671	TRIP4	85	69.263	Gopherus_agassizii
ENSRNOG00000016121	Trip4	100	88.468	ENSGGOG00000022608	TRIP4	100	88.468	Gorilla_gorilla
ENSRNOG00000016121	Trip4	97	59.756	ENSHBUG00000021071	trip4	99	59.756	Haplochromis_burtoni
ENSRNOG00000016121	Trip4	100	86.059	ENSHGLG00000009286	TRIP4	100	86.059	Heterocephalus_glaber_female
ENSRNOG00000016121	Trip4	100	85.886	ENSHGLG00100017760	TRIP4	100	85.886	Heterocephalus_glaber_male
ENSRNOG00000016121	Trip4	97	57.739	ENSHCOG00000017904	trip4	98	58.261	Hippocampus_comes
ENSRNOG00000016121	Trip4	98	58.232	ENSIPUG00000013205	trip4	99	58.752	Ictalurus_punctatus
ENSRNOG00000016121	Trip4	100	88.124	ENSSTOG00000014228	TRIP4	100	88.124	Ictidomys_tridecemlineatus
ENSRNOG00000016121	Trip4	97	78.966	ENSJJAG00000001629	Trip4	99	78.966	Jaculus_jaculus
ENSRNOG00000016121	Trip4	97	60.453	ENSKMAG00000001297	trip4	99	60.453	Kryptolebias_marmoratus
ENSRNOG00000016121	Trip4	98	57.093	ENSLBEG00000018354	trip4	99	58.491	Labrus_bergylta
ENSRNOG00000016121	Trip4	99	61.872	ENSLACG00000014856	TRIP4	99	61.872	Latimeria_chalumnae
ENSRNOG00000016121	Trip4	98	60.627	ENSLOCG00000014993	trip4	99	60.627	Lepisosteus_oculatus
ENSRNOG00000016121	Trip4	100	83.821	ENSLAFG00000017612	TRIP4	100	83.821	Loxodonta_africana
ENSRNOG00000016121	Trip4	100	88.124	ENSMFAG00000036568	TRIP4	100	88.124	Macaca_fascicularis
ENSRNOG00000016121	Trip4	100	88.124	ENSMMUG00000009882	TRIP4	100	88.124	Macaca_mulatta
ENSRNOG00000016121	Trip4	100	88.296	ENSMNEG00000033592	TRIP4	100	88.296	Macaca_nemestrina
ENSRNOG00000016121	Trip4	100	88.124	ENSMLEG00000027911	TRIP4	100	88.124	Mandrillus_leucophaeus
ENSRNOG00000016121	Trip4	97	57.904	ENSMAMG00000013374	trip4	99	58.319	Mastacembelus_armatus
ENSRNOG00000016121	Trip4	97	59.756	ENSMZEG00005013450	trip4	99	59.756	Maylandia_zebra
ENSRNOG00000016121	Trip4	100	88.124	ENSMICG00000008679	TRIP4	100	88.124	Microcebus_murinus
ENSRNOG00000016121	Trip4	100	92.427	ENSMOCG00000012669	Trip4	100	92.427	Microtus_ochrogaster
ENSRNOG00000016121	Trip4	95	57.726	ENSMMOG00000002315	trip4	98	57.726	Mola_mola
ENSRNOG00000016121	Trip4	100	77.320	ENSMODG00000010743	TRIP4	92	77.265	Monodelphis_domestica
ENSRNOG00000016121	Trip4	100	94.664	MGP_CAROLIEiJ_G0032370	Trip4	100	94.664	Mus_caroli
ENSRNOG00000016121	Trip4	100	94.320	ENSMUSG00000032386	Trip4	100	94.320	Mus_musculus
ENSRNOG00000016121	Trip4	100	94.320	MGP_PahariEiJ_G0015235	Trip4	100	94.320	Mus_pahari
ENSRNOG00000016121	Trip4	100	94.664	MGP_SPRETEiJ_G0033509	Trip4	100	94.664	Mus_spretus
ENSRNOG00000016121	Trip4	100	85.026	ENSMPUG00000000568	TRIP4	100	85.026	Mustela_putorius_furo
ENSRNOG00000016121	Trip4	95	84.909	ENSMLUG00000013367	TRIP4	100	84.909	Myotis_lucifugus
ENSRNOG00000016121	Trip4	100	89.708	ENSNGAG00000019566	Trip4	100	89.708	Nannospalax_galili
ENSRNOG00000016121	Trip4	96	58.025	ENSNBRG00000020663	trip4	97	59.083	Neolamprologus_brichardi
ENSRNOG00000016121	Trip4	100	88.124	ENSNLEG00000012455	TRIP4	100	88.124	Nomascus_leucogenys
ENSRNOG00000016121	Trip4	72	76.744	ENSMEUG00000005886	TRIP4	85	76.744	Notamacropus_eugenii
ENSRNOG00000016121	Trip4	100	81.756	ENSOPRG00000009512	TRIP4	100	81.756	Ochotona_princeps
ENSRNOG00000016121	Trip4	100	85.370	ENSODEG00000016494	TRIP4	100	85.370	Octodon_degus
ENSRNOG00000016121	Trip4	89	59.160	ENSONIG00000005703	trip4	98	59.160	Oreochromis_niloticus
ENSRNOG00000016121	Trip4	98	75.482	ENSOANG00000013357	TRIP4	99	73.401	Ornithorhynchus_anatinus
ENSRNOG00000016121	Trip4	100	86.747	ENSOCUG00000002322	TRIP4	100	86.747	Oryctolagus_cuniculus
ENSRNOG00000016121	Trip4	97	56.672	ENSORLG00000001710	trip4	99	57.019	Oryzias_latipes
ENSRNOG00000016121	Trip4	97	57.019	ENSORLG00020022346	trip4	99	57.366	Oryzias_latipes_hni
ENSRNOG00000016121	Trip4	97	56.846	ENSORLG00015022509	trip4	99	57.192	Oryzias_latipes_hsok
ENSRNOG00000016121	Trip4	97	58.957	ENSOMEG00000007655	trip4	99	59.304	Oryzias_melastigma
ENSRNOG00000016121	Trip4	100	78.216	ENSOGAG00000012427	TRIP4	100	78.216	Otolemur_garnettii
ENSRNOG00000016121	Trip4	99	83.993	ENSOARG00000020739	TRIP4	99	83.993	Ovis_aries
ENSRNOG00000016121	Trip4	100	88.468	ENSPPAG00000017953	TRIP4	100	88.468	Pan_paniscus
ENSRNOG00000016121	Trip4	100	85.886	ENSPPRG00000013668	TRIP4	100	85.886	Panthera_pardus
ENSRNOG00000016121	Trip4	100	86.059	ENSPTIG00000014502	TRIP4	100	86.059	Panthera_tigris_altaica
ENSRNOG00000016121	Trip4	100	80.895	ENSPTRG00000007160	TRIP4	100	80.895	Pan_troglodytes
ENSRNOG00000016121	Trip4	100	88.468	ENSPANG00000016750	TRIP4	100	88.468	Papio_anubis
ENSRNOG00000016121	Trip4	98	57.639	ENSPKIG00000022978	-	99	57.639	Paramormyrops_kingsleyae
ENSRNOG00000016121	Trip4	89	55.894	ENSPKIG00000009253	trip4	99	55.894	Paramormyrops_kingsleyae
ENSRNOG00000016121	Trip4	94	68.468	ENSPSIG00000012082	TRIP4	98	68.468	Pelodiscus_sinensis
ENSRNOG00000016121	Trip4	98	53.299	ENSPMGG00000019015	trip4	98	53.646	Periophthalmus_magnuspinnatus
ENSRNOG00000016121	Trip4	100	90.361	ENSPEMG00000012446	Trip4	100	90.361	Peromyscus_maniculatus_bairdii
ENSRNOG00000016121	Trip4	99	76.430	ENSPCIG00000029450	TRIP4	96	76.239	Phascolarctos_cinereus
ENSRNOG00000016121	Trip4	97	57.241	ENSPFOG00000014732	trip4	99	57.241	Poecilia_formosa
ENSRNOG00000016121	Trip4	97	57.414	ENSPLAG00000013794	trip4	99	57.414	Poecilia_latipinna
ENSRNOG00000016121	Trip4	97	57.414	ENSPMEG00000001331	trip4	99	57.414	Poecilia_mexicana
ENSRNOG00000016121	Trip4	97	56.552	ENSPREG00000006576	trip4	99	56.552	Poecilia_reticulata
ENSRNOG00000016121	Trip4	100	87.952	ENSPPYG00000006550	TRIP4	100	87.952	Pongo_abelii
ENSRNOG00000016121	Trip4	98	73.860	ENSPCAG00000016310	TRIP4	100	73.838	Procavia_capensis
ENSRNOG00000016121	Trip4	100	73.368	ENSPCOG00000013484	TRIP4	100	73.540	Propithecus_coquereli
ENSRNOG00000016121	Trip4	96	74.061	ENSPVAG00000016613	TRIP4	100	74.061	Pteropus_vampyrus
ENSRNOG00000016121	Trip4	98	56.000	ENSPNYG00000011318	trip4	98	56.000	Pundamilia_nyererei
ENSRNOG00000016121	Trip4	98	58.087	ENSPNAG00000020884	trip4	99	58.435	Pygocentrus_nattereri
ENSRNOG00000016121	Trip4	88	89.600	ENSRBIG00000038027	TRIP4	100	89.600	Rhinopithecus_bieti
ENSRNOG00000016121	Trip4	100	88.468	ENSRROG00000030525	TRIP4	100	88.468	Rhinopithecus_roxellana
ENSRNOG00000016121	Trip4	100	75.300	ENSSBOG00000020516	TRIP4	100	76.158	Saimiri_boliviensis_boliviensis
ENSRNOG00000016121	Trip4	94	77.372	ENSSHAG00000000040	TRIP4	100	77.372	Sarcophilus_harrisii
ENSRNOG00000016121	Trip4	98	59.155	ENSSFOG00015000143	trip4	99	59.683	Scleropages_formosus
ENSRNOG00000016121	Trip4	97	57.465	ENSSMAG00000010539	trip4	99	57.465	Scophthalmus_maximus
ENSRNOG00000016121	Trip4	97	56.379	ENSSDUG00000000225	trip4	99	57.831	Seriola_dumerili
ENSRNOG00000016121	Trip4	97	56.724	ENSSLDG00000000215	trip4	99	57.241	Seriola_lalandi_dorsalis
ENSRNOG00000016121	Trip4	83	83.333	ENSSARG00000003710	TRIP4	83	83.333	Sorex_araneus
ENSRNOG00000016121	Trip4	96	61.111	ENSSPUG00000004511	TRIP4	98	61.717	Sphenodon_punctatus
ENSRNOG00000016121	Trip4	97	57.534	ENSSPAG00000008520	trip4	99	57.534	Stegastes_partitus
ENSRNOG00000016121	Trip4	100	85.714	ENSSSCG00000004552	TRIP4	100	85.333	Sus_scrofa
ENSRNOG00000016121	Trip4	98	67.657	ENSTGUG00000004673	TRIP4	100	67.657	Taeniopygia_guttata
ENSRNOG00000016121	Trip4	97	57.192	ENSTRUG00000016488	trip4	99	57.712	Takifugu_rubripes
ENSRNOG00000016121	Trip4	99	55.822	ENSTNIG00000009582	trip4	99	55.822	Tetraodon_nigroviridis
ENSRNOG00000016121	Trip4	94	87.226	ENSTBEG00000015881	TRIP4	100	87.226	Tupaia_belangeri
ENSRNOG00000016121	Trip4	89	89.062	ENSTTRG00000009674	TRIP4	89	89.062	Tursiops_truncatus
ENSRNOG00000016121	Trip4	100	84.682	ENSUMAG00000012640	TRIP4	100	84.682	Ursus_maritimus
ENSRNOG00000016121	Trip4	100	81.067	ENSVPAG00000010808	TRIP4	100	81.067	Vicugna_pacos
ENSRNOG00000016121	Trip4	100	85.370	ENSVVUG00000013776	TRIP4	100	85.370	Vulpes_vulpes
ENSRNOG00000016121	Trip4	97	58.188	ENSXETG00000010649	trip4	97	58.188	Xenopus_tropicalis
ENSRNOG00000016121	Trip4	97	57.586	ENSXMAG00000000526	trip4	99	58.276	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002020	protease binding	-	IEA	Function
GO:0002020	protease binding	-	ISO	Function
GO:0003713	transcription coactivator activity	21873635.	IBA	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005813	centrosome	-	IEA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISO	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0016922	nuclear receptor binding	-	ISO	Function
GO:0019901	protein kinase binding	-	IEA	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0030331	estrogen receptor binding	-	IEA	Function
GO:0030331	estrogen receptor binding	-	ISO	Function
GO:0030520	intracellular estrogen receptor signaling pathway	-	IEA	Process
GO:0030520	intracellular estrogen receptor signaling pathway	-	ISO	Process
GO:0031594	neuromuscular junction	-	IEA	Component
GO:0031594	neuromuscular junction	-	ISO	Component
GO:0032991	protein-containing complex	-	ISO	Component
GO:0035035	histone acetyltransferase binding	-	IEA	Function
GO:0035035	histone acetyltransferase binding	-	ISO	Function
GO:0044389	ubiquitin-like protein ligase binding	-	IEA	Function
GO:0044389	ubiquitin-like protein ligase binding	-	ISO	Function
GO:0045661	regulation of myoblast differentiation	-	IEA	Process
GO:0045661	regulation of myoblast differentiation	-	ISO	Process
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0099053	activating signal cointegrator 1 complex	-	IEA	Component
GO:0099053	activating signal cointegrator 1 complex	-	ISO	Component
GO:1901998	toxin transport	-	IEA	Process
GO:1901998	toxin transport	-	ISO	Process