EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000016330 (Gene tree)
Gene ID: 313069
Gene Symbol: Rbm12b
Alias: LOC313069|RGD1307658
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 2929 bases
Position: chr5:25253010-25255938
Accession: 1307658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000058050	RRM_1	PF00076.22	7.7e-32	1	2
ENSRNOP00000058050	RRM_1	PF00076.22	7.7e-32	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000061333	-	2929	XM_006237894	ENSRNOP00000058050	843 (aa)	XP_006225287	D3ZM54

Gene Model

Click here to download ENSRNOG00000016330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000016330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000016330	Rbm12b	88	100.000	ENSRNOG00000055292	LOC679087	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000016330	Rbm12b	100	71.219	ENSG00000183808	RBM12B	100	92.683	Homo_sapiens
ENSRNOG00000016330	Rbm12b	66	49.333	ENSAPOG00000013963	rbm12b	86	49.333	Acanthochromis_polyacanthus
ENSRNOG00000016330	Rbm12b	56	30.143	ENSAPOG00000008836	zgc:153215	95	30.143	Acanthochromis_polyacanthus
ENSRNOG00000016330	Rbm12b	100	72.442	ENSAMEG00000007134	RBM12B	100	72.442	Ailuropoda_melanoleuca
ENSRNOG00000016330	Rbm12b	65	38.462	ENSACIG00000014943	rbm12b	99	39.077	Amphilophus_citrinellus
ENSRNOG00000016330	Rbm12b	66	50.667	ENSAOCG00000024270	rbm12b	87	48.780	Amphiprion_ocellaris
ENSRNOG00000016330	Rbm12b	65	47.692	ENSAPEG00000022079	rbm12b	99	42.073	Amphiprion_percula
ENSRNOG00000016330	Rbm12b	78	42.915	ENSATEG00000004578	rbm12b	97	43.347	Anabas_testudineus
ENSRNOG00000016330	Rbm12b	85	53.642	ENSAPLG00000002020	RBM12B	100	53.642	Anas_platyrhynchos
ENSRNOG00000016330	Rbm12b	84	44.123	ENSACAG00000003463	RBM12B	67	44.123	Anolis_carolinensis
ENSRNOG00000016330	Rbm12b	100	72.897	ENSANAG00000034015	RBM12B	100	72.897	Aotus_nancymaae
ENSRNOG00000016330	Rbm12b	61	49.333	ENSACLG00000005578	rbm12b	77	49.333	Astatotilapia_calliptera
ENSRNOG00000016330	Rbm12b	67	49.333	ENSACLG00000005575	rbm12b	84	49.333	Astatotilapia_calliptera
ENSRNOG00000016330	Rbm12b	66	42.254	ENSAMXG00000041973	rbm12b	86	42.254	Astyanax_mexicanus
ENSRNOG00000016330	Rbm12b	100	70.413	ENSBTAG00000013408	RBM12B	100	70.413	Bos_taurus
ENSRNOG00000016330	Rbm12b	100	62.563	ENSCAFG00000009109	RBM12B	100	61.284	Canis_familiaris
ENSRNOG00000016330	Rbm12b	100	70.648	ENSCAFG00020012203	RBM12B	100	70.193	Canis_lupus_dingo
ENSRNOG00000016330	Rbm12b	77	72.811	ENSCHIG00000006790	RBM12B	88	72.811	Capra_hircus
ENSRNOG00000016330	Rbm12b	100	69.669	ENSTSYG00000012515	RBM12B	100	62.247	Carlito_syrichta
ENSRNOG00000016330	Rbm12b	100	66.458	ENSCAPG00000003543	RBM12B	100	69.108	Cavia_aperea
ENSRNOG00000016330	Rbm12b	100	66.458	ENSCPOG00000007815	RBM12B	100	69.108	Cavia_porcellus
ENSRNOG00000016330	Rbm12b	100	71.511	ENSCATG00000030769	RBM12B	100	71.511	Cercocebus_atys
ENSRNOG00000016330	Rbm12b	100	67.294	ENSCLAG00000017617	RBM12B	100	64.293	Chinchilla_lanigera
ENSRNOG00000016330	Rbm12b	100	71.060	ENSCSAG00000018559	RBM12B	100	71.060	Chlorocebus_sabaeus
ENSRNOG00000016330	Rbm12b	98	63.799	ENSCHOG00000008934	RBM12B	100	69.742	Choloepus_hoffmanni
ENSRNOG00000016330	Rbm12b	86	54.167	ENSCPBG00000003061	RBM12B	100	54.167	Chrysemys_picta_bellii
ENSRNOG00000016330	Rbm12b	100	71.198	ENSCANG00000030379	RBM12B	100	71.198	Colobus_angolensis_palliatus
ENSRNOG00000016330	Rbm12b	100	79.695	ENSCGRG00001008710	-	97	79.695	Cricetulus_griseus_chok1gshd
ENSRNOG00000016330	Rbm12b	69	49.333	ENSCSEG00000004610	rbm12b	85	49.333	Cynoglossus_semilaevis
ENSRNOG00000016330	Rbm12b	66	48.000	ENSCVAG00000011047	rbm12b	86	48.000	Cyprinodon_variegatus
ENSRNOG00000016330	Rbm12b	67	44.000	ENSDARG00000079717	rbm12b	81	44.000	Danio_rerio
ENSRNOG00000016330	Rbm12b	100	70.516	ENSDNOG00000041608	RBM12B	100	70.828	Dasypus_novemcinctus
ENSRNOG00000016330	Rbm12b	100	65.569	ENSDORG00000024034	-	100	64.506	Dipodomys_ordii
ENSRNOG00000016330	Rbm12b	71	64.992	ENSETEG00000013005	-	86	64.198	Echinops_telfairi
ENSRNOG00000016330	Rbm12b	54	30.952	ENSEBUG00000009015	-	71	30.952	Eptatretus_burgeri
ENSRNOG00000016330	Rbm12b	100	71.705	ENSEASG00005016297	RBM12B	100	71.705	Equus_asinus_asinus
ENSRNOG00000016330	Rbm12b	100	63.951	ENSECAG00000017870	RBM12B	100	71.191	Equus_caballus
ENSRNOG00000016330	Rbm12b	100	72.465	ENSFCAG00000029274	RBM12B	100	72.465	Felis_catus
ENSRNOG00000016330	Rbm12b	85	51.678	ENSFALG00000014893	RBM12B	100	51.678	Ficedula_albicollis
ENSRNOG00000016330	Rbm12b	100	66.737	ENSFDAG00000005576	RBM12B	97	64.811	Fukomys_damarensis
ENSRNOG00000016330	Rbm12b	67	45.122	ENSFHEG00000016425	rbm12b	86	45.122	Fundulus_heteroclitus
ENSRNOG00000016330	Rbm12b	69	51.429	ENSGMOG00000013467	rbm12b	89	51.429	Gadus_morhua
ENSRNOG00000016330	Rbm12b	85	53.020	ENSGALG00000035129	RBM12B	100	52.755	Gallus_gallus
ENSRNOG00000016330	Rbm12b	67	45.122	ENSGAFG00000007224	rbm12b	87	45.122	Gambusia_affinis
ENSRNOG00000016330	Rbm12b	57	31.619	ENSGAFG00000007845	zgc:153215	98	31.619	Gambusia_affinis
ENSRNOG00000016330	Rbm12b	67	49.333	ENSGACG00000008682	rbm12b	85	49.333	Gasterosteus_aculeatus
ENSRNOG00000016330	Rbm12b	87	53.038	ENSGAGG00000009774	RBM12B	100	53.038	Gopherus_agassizii
ENSRNOG00000016330	Rbm12b	100	72.273	ENSGGOG00000011909	RBM12B	100	72.273	Gorilla_gorilla
ENSRNOG00000016330	Rbm12b	70	49.333	ENSHBUG00000016227	rbm12b	87	49.333	Haplochromis_burtoni
ENSRNOG00000016330	Rbm12b	100	66.253	ENSHGLG00000009063	RBM12B	100	64.596	Heterocephalus_glaber_female
ENSRNOG00000016330	Rbm12b	100	66.253	ENSHGLG00100021324	RBM12B	100	64.596	Heterocephalus_glaber_male
ENSRNOG00000016330	Rbm12b	75	37.398	ENSHCOG00000014952	rbm12b	100	37.398	Hippocampus_comes
ENSRNOG00000016330	Rbm12b	76	50.667	ENSIPUG00000001167	RBM12B	95	50.667	Ictalurus_punctatus
ENSRNOG00000016330	Rbm12b	57	30.601	ENSIPUG00000019731	zgc:153215	99	30.601	Ictalurus_punctatus
ENSRNOG00000016330	Rbm12b	100	74.564	ENSSTOG00000027445	RBM12B	100	74.564	Ictidomys_tridecemlineatus
ENSRNOG00000016330	Rbm12b	100	70.395	ENSJJAG00000004165	-	100	70.282	Jaculus_jaculus
ENSRNOG00000016330	Rbm12b	67	52.000	ENSKMAG00000013704	rbm12b	83	52.000	Kryptolebias_marmoratus
ENSRNOG00000016330	Rbm12b	67	52.000	ENSKMAG00000013715	rbm12b	86	52.000	Kryptolebias_marmoratus
ENSRNOG00000016330	Rbm12b	57	30.040	ENSKMAG00000004958	zgc:153215	99	30.040	Kryptolebias_marmoratus
ENSRNOG00000016330	Rbm12b	70	64.557	ENSLACG00000007177	RBM12B	95	53.153	Latimeria_chalumnae
ENSRNOG00000016330	Rbm12b	67	52.000	ENSLOCG00000018344	rbm12b	86	52.000	Lepisosteus_oculatus
ENSRNOG00000016330	Rbm12b	100	69.140	ENSLAFG00000029949	RBM12B	100	69.494	Loxodonta_africana
ENSRNOG00000016330	Rbm12b	100	71.313	ENSMFAG00000045430	RBM12B	100	71.313	Macaca_fascicularis
ENSRNOG00000016330	Rbm12b	100	71.332	ENSMMUG00000005558	RBM12B	100	71.332	Macaca_mulatta
ENSRNOG00000016330	Rbm12b	100	71.313	ENSMNEG00000041292	RBM12B	100	71.313	Macaca_nemestrina
ENSRNOG00000016330	Rbm12b	100	71.364	ENSMLEG00000037288	RBM12B	100	71.702	Mandrillus_leucophaeus
ENSRNOG00000016330	Rbm12b	57	30.612	ENSMAMG00000012038	zgc:153215	94	30.612	Mastacembelus_armatus
ENSRNOG00000016330	Rbm12b	70	52.000	ENSMAMG00000011998	rbm12b	86	50.633	Mastacembelus_armatus
ENSRNOG00000016330	Rbm12b	67	49.333	ENSMZEG00005014845	rbm12b	85	48.611	Maylandia_zebra
ENSRNOG00000016330	Rbm12b	67	49.333	ENSMZEG00005015005	rbm12b	86	49.333	Maylandia_zebra
ENSRNOG00000016330	Rbm12b	58	57.004	ENSMGAG00000011985	RBM12B	99	57.393	Meleagris_gallopavo
ENSRNOG00000016330	Rbm12b	100	79.553	ENSMAUG00000021752	-	100	79.553	Mesocricetus_auratus
ENSRNOG00000016330	Rbm12b	100	72.685	ENSMICG00000036969	RBM12B	100	72.274	Microcebus_murinus
ENSRNOG00000016330	Rbm12b	100	75.967	ENSMOCG00000005603	-	100	75.967	Microtus_ochrogaster
ENSRNOG00000016330	Rbm12b	67	64.634	ENSMMOG00000002404	rbm12b	94	64.634	Mola_mola
ENSRNOG00000016330	Rbm12b	57	30.719	ENSMMOG00000003372	zgc:153215	99	30.719	Mola_mola
ENSRNOG00000016330	Rbm12b	99	59.356	ENSMODG00000007436	RBM12B	98	55.196	Monodelphis_domestica
ENSRNOG00000016330	Rbm12b	57	30.101	ENSMALG00000001222	zgc:153215	98	30.101	Monopterus_albus
ENSRNOG00000016330	Rbm12b	73	46.835	ENSMALG00000012059	rbm12b	91	46.835	Monopterus_albus
ENSRNOG00000016330	Rbm12b	100	86.477	ENSMUSG00000052137	Rbm12b2	100	86.477	Mus_musculus
ENSRNOG00000016330	Rbm12b	100	86.714	ENSMUSG00000046667	Rbm12b1	100	86.714	Mus_musculus
ENSRNOG00000016330	Rbm12b	100	78.936	MGP_SPRETEiJ_G0026765	-	100	77.874	Mus_spretus
ENSRNOG00000016330	Rbm12b	100	86.833	MGP_SPRETEiJ_G0026766	-	100	86.833	Mus_spretus
ENSRNOG00000016330	Rbm12b	100	61.853	ENSMPUG00000018637	RBM12B	100	71.020	Mustela_putorius_furo
ENSRNOG00000016330	Rbm12b	100	62.762	ENSMLUG00000002359	RBM12B	100	62.565	Myotis_lucifugus
ENSRNOG00000016330	Rbm12b	100	70.999	ENSNGAG00000002801	-	100	68.817	Nannospalax_galili
ENSRNOG00000016330	Rbm12b	67	49.333	ENSNBRG00000015057	rbm12b	86	49.333	Neolamprologus_brichardi
ENSRNOG00000016330	Rbm12b	100	71.316	ENSNLEG00000032050	RBM12B	100	71.316	Nomascus_leucogenys
ENSRNOG00000016330	Rbm12b	100	65.900	ENSODEG00000019204	RBM12B	100	63.627	Octodon_degus
ENSRNOG00000016330	Rbm12b	67	49.333	ENSONIG00000020612	rbm12b	86	49.333	Oreochromis_niloticus
ENSRNOG00000016330	Rbm12b	85	57.333	ENSOANG00000015735	-	97	57.333	Ornithorhynchus_anatinus
ENSRNOG00000016330	Rbm12b	100	72.241	ENSOCUG00000010353	RBM12B	100	72.241	Oryctolagus_cuniculus
ENSRNOG00000016330	Rbm12b	66	49.333	ENSORLG00000008228	rbm12b	83	49.333	Oryzias_latipes
ENSRNOG00000016330	Rbm12b	66	49.333	ENSORLG00020013619	rbm12b	83	49.333	Oryzias_latipes_hni
ENSRNOG00000016330	Rbm12b	66	49.333	ENSORLG00015019999	rbm12b	83	49.333	Oryzias_latipes_hsok
ENSRNOG00000016330	Rbm12b	66	49.333	ENSOMEG00000022523	rbm12b	83	49.333	Oryzias_melastigma
ENSRNOG00000016330	Rbm12b	100	62.563	ENSOGAG00000002979	RBM12B	100	71.056	Otolemur_garnettii
ENSRNOG00000016330	Rbm12b	100	71.986	ENSPTIG00000020071	RBM12B	100	71.986	Panthera_tigris_altaica
ENSRNOG00000016330	Rbm12b	100	71.445	ENSPTRG00000020420	RBM12B	100	71.251	Pan_troglodytes
ENSRNOG00000016330	Rbm12b	100	70.913	ENSPANG00000035535	RBM12B	100	71.590	Papio_anubis
ENSRNOG00000016330	Rbm12b	57	33.205	ENSPKIG00000014851	zgc:153215	98	33.205	Paramormyrops_kingsleyae
ENSRNOG00000016330	Rbm12b	67	49.333	ENSPKIG00000018719	rbm12b	84	51.389	Paramormyrops_kingsleyae
ENSRNOG00000016330	Rbm12b	86	53.411	ENSPSIG00000001348	RBM12B	100	53.411	Pelodiscus_sinensis
ENSRNOG00000016330	Rbm12b	52	37.764	ENSPMGG00000012348	-	97	37.764	Periophthalmus_magnuspinnatus
ENSRNOG00000016330	Rbm12b	100	80.047	ENSPEMG00000008279	-	100	80.047	Peromyscus_maniculatus_bairdii
ENSRNOG00000016330	Rbm12b	98	60.031	ENSPCIG00000008556	RBM12B	100	55.940	Phascolarctos_cinereus
ENSRNOG00000016330	Rbm12b	53	42.857	ENSPFOG00000017451	zgc:153215	70	42.857	Poecilia_formosa
ENSRNOG00000016330	Rbm12b	67	45.122	ENSPFOG00000020937	rbm12b	84	45.122	Poecilia_formosa
ENSRNOG00000016330	Rbm12b	67	45.122	ENSPLAG00000018782	rbm12b	87	45.122	Poecilia_latipinna
ENSRNOG00000016330	Rbm12b	67	45.122	ENSPMEG00000011418	rbm12b	87	45.122	Poecilia_mexicana
ENSRNOG00000016330	Rbm12b	74	45.122	ENSPREG00000020770	rbm12b	99	45.122	Poecilia_reticulata
ENSRNOG00000016330	Rbm12b	58	30.077	ENSPREG00000018608	zgc:153215	99	30.077	Poecilia_reticulata
ENSRNOG00000016330	Rbm12b	100	70.788	ENSPPYG00000018745	RBM12B	100	70.788	Pongo_abelii
ENSRNOG00000016330	Rbm12b	100	72.634	ENSPCOG00000023546	RBM12B	100	72.634	Propithecus_coquereli
ENSRNOG00000016330	Rbm12b	100	66.381	ENSPVAG00000011803	RBM12B	100	65.096	Pteropus_vampyrus
ENSRNOG00000016330	Rbm12b	67	49.333	ENSPNYG00000016696	rbm12b	86	49.333	Pundamilia_nyererei
ENSRNOG00000016330	Rbm12b	57	31.227	ENSPNAG00000025628	zgc:153215	99	31.227	Pygocentrus_nattereri
ENSRNOG00000016330	Rbm12b	66	49.296	ENSPNAG00000008126	rbm12b	83	49.296	Pygocentrus_nattereri
ENSRNOG00000016330	Rbm12b	100	72.235	ENSRBIG00000035046	RBM12B	100	72.235	Rhinopithecus_bieti
ENSRNOG00000016330	Rbm12b	100	71.828	ENSRROG00000023660	RBM12B	100	71.828	Rhinopithecus_roxellana
ENSRNOG00000016330	Rbm12b	100	70.833	ENSSBOG00000027592	RBM12B	100	71.059	Saimiri_boliviensis_boliviensis
ENSRNOG00000016330	Rbm12b	98	59.509	ENSSHAG00000015335	RBM12B	100	55.427	Sarcophilus_harrisii
ENSRNOG00000016330	Rbm12b	67	50.685	ENSSFOG00015001584	rbm12b	85	50.685	Scleropages_formosus
ENSRNOG00000016330	Rbm12b	57	33.992	ENSSFOG00015009427	zgc:153215	99	33.992	Scleropages_formosus
ENSRNOG00000016330	Rbm12b	67	50.667	ENSSMAG00000019708	rbm12b	86	50.667	Scophthalmus_maximus
ENSRNOG00000016330	Rbm12b	74	42.330	ENSSDUG00000006856	rbm12b	96	42.330	Seriola_dumerili
ENSRNOG00000016330	Rbm12b	74	42.718	ENSSLDG00000016156	rbm12b	96	42.718	Seriola_lalandi_dorsalis
ENSRNOG00000016330	Rbm12b	73	69.741	ENSSARG00000011845	-	84	69.741	Sorex_araneus
ENSRNOG00000016330	Rbm12b	58	52.124	ENSSPUG00000016954	RBM12B	91	52.783	Sphenodon_punctatus
ENSRNOG00000016330	Rbm12b	74	39.484	ENSSPAG00000006774	rbm12b	97	39.484	Stegastes_partitus
ENSRNOG00000016330	Rbm12b	100	63.094	ENSSSCG00000006110	RBM12B	99	70.765	Sus_scrofa
ENSRNOG00000016330	Rbm12b	60	53.965	ENSTGUG00000011860	RBM12B	100	53.965	Taeniopygia_guttata
ENSRNOG00000016330	Rbm12b	67	48.101	ENSTRUG00000013738	rbm12b	87	48.101	Takifugu_rubripes
ENSRNOG00000016330	Rbm12b	74	72.473	ENSTBEG00000000449	RBM12B	82	72.473	Tupaia_belangeri
ENSRNOG00000016330	Rbm12b	100	70.045	ENSUAMG00000023639	RBM12B	100	69.707	Ursus_americanus
ENSRNOG00000016330	Rbm12b	100	67.314	ENSUMAG00000016008	RBM12B	100	66.811	Ursus_maritimus
ENSRNOG00000016330	Rbm12b	86	82.877	ENSVPAG00000001080	RBM12B	90	82.877	Vicugna_pacos
ENSRNOG00000016330	Rbm12b	100	70.990	ENSVVUG00000002694	RBM12B	100	70.876	Vulpes_vulpes
ENSRNOG00000016330	Rbm12b	58	30.041	ENSXETG00000025920	-	97	30.041	Xenopus_tropicalis
ENSRNOG00000016330	Rbm12b	67	41.892	ENSXETG00000014696	rbm12b	82	40.698	Xenopus_tropicalis
ENSRNOG00000016330	Rbm12b	80	46.346	ENSXETG00000014694	rbm12b	100	46.748	Xenopus_tropicalis
ENSRNOG00000016330	Rbm12b	54	40.184	ENSXCOG00000019735	-	99	40.491	Xiphophorus_couchianus
ENSRNOG00000016330	Rbm12b	57	31.226	ENSXCOG00000019654	zgc:153215	98	31.226	Xiphophorus_couchianus
ENSRNOG00000016330	Rbm12b	67	45.122	ENSXMAG00000014213	rbm12b	87	45.122	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function