EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000016391 (Gene tree)
Gene ID: 100912163
Gene Symbol: LOC100912163
Alias: Bcaa
Full Name: AT-rich interactive domain-containing protein 4B-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 83570 bases
Position: chr17:53629839-53713408
Accession: 6488837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069593	Tudor-knot	PF11717.8	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000022445	-	3681	XM_008771836	ENSRNOP00000022445	1226 (aa)	XP_008770058	F1LYA4
ENSRNOT00000078643	-	4888	-	ENSRNOP00000069593	1179 (aa)	-	A0A0G2JVS0

Gene Model

Click here to download ENSRNOG00000016391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000016391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000016391	LOC100912163	97	87.391	ENSG00000054267	ARID4B	99	79.658	Homo_sapiens
ENSRNOG00000016391	LOC100912163	96	48.087	ENSAPOG00000010823	tomm20a	87	46.982	Acanthochromis_polyacanthus
ENSRNOG00000016391	LOC100912163	97	87.402	ENSAMEG00000008801	ARID4B	88	86.881	Ailuropoda_melanoleuca
ENSRNOG00000016391	LOC100912163	96	48.256	ENSATEG00000014930	tomm20a	87	47.039	Anabas_testudineus
ENSRNOG00000016391	LOC100912163	97	72.633	ENSAPLG00000004422	ARID4B	88	72.892	Anas_platyrhynchos
ENSRNOG00000016391	LOC100912163	97	67.561	ENSACAG00000001289	ARID4B	87	67.734	Anolis_carolinensis
ENSRNOG00000016391	LOC100912163	97	88.174	ENSANAG00000038088	ARID4B	87	88.000	Aotus_nancymaae
ENSRNOG00000016391	LOC100912163	86	57.678	ENSACLG00000023521	tomm20a	85	57.661	Astatotilapia_calliptera
ENSRNOG00000016391	LOC100912163	66	89.333	ENSAMXG00000003657	tomm20a	71	59.722	Astyanax_mexicanus
ENSRNOG00000016391	LOC100912163	97	85.478	ENSBTAG00000000222	ARID4B	87	85.478	Bos_taurus
ENSRNOG00000016391	LOC100912163	97	86.945	ENSCJAG00000018055	ARID4B	87	86.684	Callithrix_jacchus
ENSRNOG00000016391	LOC100912163	97	87.043	ENSCAFG00000011439	ARID4B	87	87.043	Canis_familiaris
ENSRNOG00000016391	LOC100912163	97	86.957	ENSCAFG00020027130	ARID4B	88	86.957	Canis_lupus_dingo
ENSRNOG00000016391	LOC100912163	97	83.217	ENSCHIG00000020742	ARID4B	88	83.130	Capra_hircus
ENSRNOG00000016391	LOC100912163	97	88.077	ENSTSYG00000010028	ARID4B	87	87.990	Carlito_syrichta
ENSRNOG00000016391	LOC100912163	97	85.130	ENSCPOG00000034766	ARID4B	87	85.391	Cavia_porcellus
ENSRNOG00000016391	LOC100912163	97	88.000	ENSCCAG00000021520	ARID4B	87	87.826	Cebus_capucinus
ENSRNOG00000016391	LOC100912163	97	88.435	ENSCATG00000042166	ARID4B	87	88.261	Cercocebus_atys
ENSRNOG00000016391	LOC100912163	97	87.217	ENSCLAG00000003255	ARID4B	87	86.696	Chinchilla_lanigera
ENSRNOG00000016391	LOC100912163	97	88.609	ENSCSAG00000010069	ARID4B	87	88.435	Chlorocebus_sabaeus
ENSRNOG00000016391	LOC100912163	73	100.000	ENSCHOG00000001152	ARID4B	65	100.000	Choloepus_hoffmanni
ENSRNOG00000016391	LOC100912163	97	72.217	ENSCPBG00000004501	ARID4B	87	73.080	Chrysemys_picta_bellii
ENSRNOG00000016391	LOC100912163	97	84.087	ENSCANG00000027498	ARID4B	87	78.141	Colobus_angolensis_palliatus
ENSRNOG00000016391	LOC100912163	97	93.217	ENSCGRG00001014397	Arid4b	87	93.304	Cricetulus_griseus_chok1gshd
ENSRNOG00000016391	LOC100912163	97	93.217	ENSCGRG00000004910	Arid4b	88	93.304	Cricetulus_griseus_crigri
ENSRNOG00000016391	LOC100912163	96	47.234	ENSCSEG00000012928	tomm20a	90	46.236	Cynoglossus_semilaevis
ENSRNOG00000016391	LOC100912163	63	86.810	ENSDNOG00000005711	ARID4B	100	86.810	Dasypus_novemcinctus
ENSRNOG00000016391	LOC100912163	97	86.620	ENSDORG00000006422	Arid4b	88	86.620	Dipodomys_ordii
ENSRNOG00000016391	LOC100912163	89	85.981	ENSETEG00000005596	ARID4B	82	85.944	Echinops_telfairi
ENSRNOG00000016391	LOC100912163	97	85.130	ENSEASG00005000677	ARID4B	87	86.174	Equus_asinus_asinus
ENSRNOG00000016391	LOC100912163	97	87.304	ENSECAG00000017836	ARID4B	87	87.304	Equus_caballus
ENSRNOG00000016391	LOC100912163	79	100.000	ENSEEUG00000005378	ARID4B	74	100.000	Erinaceus_europaeus
ENSRNOG00000016391	LOC100912163	97	86.522	ENSFCAG00000030096	ARID4B	87	86.261	Felis_catus
ENSRNOG00000016391	LOC100912163	97	73.857	ENSFALG00000013548	ARID4B	86	73.857	Ficedula_albicollis
ENSRNOG00000016391	LOC100912163	99	86.278	ENSFDAG00000014194	ARID4B	88	86.087	Fukomys_damarensis
ENSRNOG00000016391	LOC100912163	96	46.211	ENSFHEG00000003798	tomm20a	87	46.103	Fundulus_heteroclitus
ENSRNOG00000016391	LOC100912163	96	49.013	ENSGACG00000004298	tomm20a	87	47.830	Gasterosteus_aculeatus
ENSRNOG00000016391	LOC100912163	97	70.837	ENSGAGG00000020544	ARID4B	85	71.220	Gopherus_agassizii
ENSRNOG00000016391	LOC100912163	97	88.348	ENSGGOG00000022080	ARID4B	87	88.174	Gorilla_gorilla
ENSRNOG00000016391	LOC100912163	97	86.870	ENSHGLG00000012546	ARID4B	87	86.870	Heterocephalus_glaber_female
ENSRNOG00000016391	LOC100912163	97	86.870	ENSHGLG00100015436	ARID4B	87	86.870	Heterocephalus_glaber_male
ENSRNOG00000016391	LOC100912163	88	68.145	ENSHCOG00000010376	tomm20a	81	68.145	Hippocampus_comes
ENSRNOG00000016391	LOC100912163	96	46.432	ENSIPUG00000014234	arid4b	87	46.250	Ictalurus_punctatus
ENSRNOG00000016391	LOC100912163	97	87.750	ENSSTOG00000002810	ARID4B	87	87.837	Ictidomys_tridecemlineatus
ENSRNOG00000016391	LOC100912163	97	85.913	ENSJJAG00000021368	Arid4b	87	85.739	Jaculus_jaculus
ENSRNOG00000016391	LOC100912163	72	86.139	ENSKMAG00000010987	tomm20a	75	86.139	Kryptolebias_marmoratus
ENSRNOG00000016391	LOC100912163	97	87.043	ENSLAFG00000014295	ARID4B	88	86.435	Loxodonta_africana
ENSRNOG00000016391	LOC100912163	97	88.435	ENSMFAG00000044016	ARID4B	87	88.261	Macaca_fascicularis
ENSRNOG00000016391	LOC100912163	97	88.435	ENSMMUG00000007141	ARID4B	87	88.261	Macaca_mulatta
ENSRNOG00000016391	LOC100912163	97	87.913	ENSMNEG00000014840	ARID4B	87	87.652	Macaca_nemestrina
ENSRNOG00000016391	LOC100912163	97	88.435	ENSMLEG00000033583	ARID4B	88	88.261	Mandrillus_leucophaeus
ENSRNOG00000016391	LOC100912163	90	45.608	ENSMAMG00000017134	tomm20a	86	45.350	Mastacembelus_armatus
ENSRNOG00000016391	LOC100912163	97	73.770	ENSMGAG00000011896	ARID4B	87	73.707	Meleagris_gallopavo
ENSRNOG00000016391	LOC100912163	97	88.628	ENSMICG00000016358	ARID4B	87	88.455	Microcebus_murinus
ENSRNOG00000016391	LOC100912163	83	70.000	ENSMMOG00000000561	tomm20a	81	66.265	Mola_mola
ENSRNOG00000016391	LOC100912163	97	79.861	ENSMODG00000008417	ARID4B	87	79.774	Monodelphis_domestica
ENSRNOG00000016391	LOC100912163	99	96.137	MGP_CAROLIEiJ_G0018236	Arid4b	89	96.137	Mus_caroli
ENSRNOG00000016391	LOC100912163	97	95.213	ENSMUSG00000039219	Arid4b	87	95.213	Mus_musculus
ENSRNOG00000016391	LOC100912163	99	96.309	MGP_PahariEiJ_G0019286	Arid4b	89	96.309	Mus_pahari
ENSRNOG00000016391	LOC100912163	97	95.213	MGP_SPRETEiJ_G0019094	Arid4b	87	95.213	Mus_spretus
ENSRNOG00000016391	LOC100912163	97	86.609	ENSMPUG00000002906	ARID4B	87	86.261	Mustela_putorius_furo
ENSRNOG00000016391	LOC100912163	97	84.909	ENSMLUG00000016232	ARID4B	88	84.389	Myotis_lucifugus
ENSRNOG00000016391	LOC100912163	97	86.851	ENSNGAG00000014629	Arid4b	88	86.073	Nannospalax_galili
ENSRNOG00000016391	LOC100912163	85	67.470	ENSNBRG00000019684	tomm20a	84	67.339	Neolamprologus_brichardi
ENSRNOG00000016391	LOC100912163	97	88.609	ENSNLEG00000002665	ARID4B	87	88.435	Nomascus_leucogenys
ENSRNOG00000016391	LOC100912163	97	86.957	ENSODEG00000005373	ARID4B	87	86.870	Octodon_degus
ENSRNOG00000016391	LOC100912163	97	88.174	ENSOCUG00000006605	ARID4B	88	88.174	Oryctolagus_cuniculus
ENSRNOG00000016391	LOC100912163	98	48.273	ENSORLG00000012510	tomm20a	87	48.432	Oryzias_latipes
ENSRNOG00000016391	LOC100912163	86	68.235	ENSORLG00020013988	tomm20a	58	68.379	Oryzias_latipes_hni
ENSRNOG00000016391	LOC100912163	86	69.170	ENSORLG00015022835	tomm20a	85	69.323	Oryzias_latipes_hsok
ENSRNOG00000016391	LOC100912163	98	47.277	ENSOMEG00000000521	tomm20a	87	47.714	Oryzias_melastigma
ENSRNOG00000016391	LOC100912163	99	77.174	ENSOGAG00000012476	ARID4B	55	78.447	Otolemur_garnettii
ENSRNOG00000016391	LOC100912163	97	84.917	ENSOARG00000003481	ARID4B	85	84.917	Ovis_aries
ENSRNOG00000016391	LOC100912163	97	88.087	ENSPPAG00000031651	ARID4B	87	87.826	Pan_paniscus
ENSRNOG00000016391	LOC100912163	97	86.522	ENSPPRG00000013739	ARID4B	87	86.261	Panthera_pardus
ENSRNOG00000016391	LOC100912163	97	84.435	ENSPTIG00000012520	ARID4B	87	84.174	Panthera_tigris_altaica
ENSRNOG00000016391	LOC100912163	94	87.960	ENSPTRG00000048786	-	95	87.691	Pan_troglodytes
ENSRNOG00000016391	LOC100912163	97	88.261	ENSPTRG00000002129	ARID4B	87	88.000	Pan_troglodytes
ENSRNOG00000016391	LOC100912163	97	88.435	ENSPANG00000013611	ARID4B	88	88.261	Papio_anubis
ENSRNOG00000016391	LOC100912163	97	73.534	ENSPSIG00000011632	ARID4B	94	74.052	Pelodiscus_sinensis
ENSRNOG00000016391	LOC100912163	53	62.069	ENSPMGG00000001596	tomm20a	76	62.069	Periophthalmus_magnuspinnatus
ENSRNOG00000016391	LOC100912163	97	78.906	ENSPCIG00000029756	ARID4B	87	79.427	Phascolarctos_cinereus
ENSRNOG00000016391	LOC100912163	96	45.159	ENSPMEG00000003093	tomm20a	75	45.987	Poecilia_mexicana
ENSRNOG00000016391	LOC100912163	96	47.475	ENSPREG00000007996	tomm20a	87	47.714	Poecilia_reticulata
ENSRNOG00000016391	LOC100912163	97	88.000	ENSPPYG00000000098	ARID4B	87	87.739	Pongo_abelii
ENSRNOG00000016391	LOC100912163	99	88.190	ENSPCOG00000024328	ARID4B	89	88.105	Propithecus_coquereli
ENSRNOG00000016391	LOC100912163	97	81.826	ENSPVAG00000015159	ARID4B	87	81.043	Pteropus_vampyrus
ENSRNOG00000016391	LOC100912163	97	79.567	ENSRBIG00000042029	ARID4B	87	79.481	Rhinopithecus_bieti
ENSRNOG00000016391	LOC100912163	97	88.435	ENSRROG00000045203	ARID4B	87	88.261	Rhinopithecus_roxellana
ENSRNOG00000016391	LOC100912163	93	87.923	ENSSBOG00000020196	ARID4B	100	87.740	Saimiri_boliviensis_boliviensis
ENSRNOG00000016391	LOC100912163	97	79.636	ENSSHAG00000015214	ARID4B	87	80.503	Sarcophilus_harrisii
ENSRNOG00000016391	LOC100912163	74	44.557	ENSSFOG00015008923	tomm20a	85	46.681	Scleropages_formosus
ENSRNOG00000016391	LOC100912163	97	72.931	ENSSPUG00000015466	ARID4B	86	72.414	Sphenodon_punctatus
ENSRNOG00000016391	LOC100912163	97	86.696	ENSSSCG00000010156	ARID4B	87	86.174	Sus_scrofa
ENSRNOG00000016391	LOC100912163	97	74.566	ENSTGUG00000010246	ARID4B	87	73.785	Taeniopygia_guttata
ENSRNOG00000016391	LOC100912163	62	46.415	ENSTRUG00000002893	tomm20a	85	44.828	Takifugu_rubripes
ENSRNOG00000016391	LOC100912163	75	76.316	ENSTBEG00000003961	ARID4B	68	75.478	Tupaia_belangeri
ENSRNOG00000016391	LOC100912163	97	86.957	ENSTTRG00000002228	ARID4B	87	86.609	Tursiops_truncatus
ENSRNOG00000016391	LOC100912163	98	87.500	ENSUMAG00000006905	ARID4B	89	86.957	Ursus_maritimus
ENSRNOG00000016391	LOC100912163	63	90.000	ENSVPAG00000006841	ARID4B	57	90.000	Vicugna_pacos
ENSRNOG00000016391	LOC100912163	99	84.157	ENSVVUG00000008154	ARID4B	100	84.000	Vulpes_vulpes
ENSRNOG00000016391	LOC100912163	97	58.276	ENSXETG00000024651	arid4b	87	57.340	Xenopus_tropicalis
ENSRNOG00000016391	LOC100912163	96	46.128	ENSXMAG00000006538	tomm20a	87	46.656	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process