EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000016777 (Gene tree)
Gene ID: -
Gene Symbol: AABR07018321.1
Alias: -
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 17085 bases
Position: chr15:51369106-51386190
Accession: 361064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000022706	R3H	PF01424.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000022706	AABR07018321.1-201	1782	XM_006252286	ENSRNOP00000022706	593 (aa)	XP_006252348	F1LZB0

Gene Model

Click here to download ENSRNOG00000016777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000016777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000016777	AABR07018321.1	85	62.475	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSRNOG00000016777	AABR07018321.1	55	44.375	ENSAPOG00000003616	r3hcc1	66	44.375	Acanthochromis_polyacanthus
ENSRNOG00000016777	AABR07018321.1	87	61.877	ENSAMEG00000002963	R3HCC1	98	62.835	Ailuropoda_melanoleuca
ENSRNOG00000016777	AABR07018321.1	51	38.674	ENSATEG00000023860	r3hcc1	68	42.073	Anabas_testudineus
ENSRNOG00000016777	AABR07018321.1	81	44.467	ENSACAG00000016627	R3HCC1	98	44.033	Anolis_carolinensis
ENSRNOG00000016777	AABR07018321.1	69	80.000	ENSANAG00000036169	R3HCC1	96	65.314	Aotus_nancymaae
ENSRNOG00000016777	AABR07018321.1	77	61.269	ENSBTAG00000025830	R3HCC1	97	63.105	Bos_taurus
ENSRNOG00000016777	AABR07018321.1	92	56.732	ENSCJAG00000020118	R3HCC1	97	61.441	Callithrix_jacchus
ENSRNOG00000016777	AABR07018321.1	83	54.709	ENSCAFG00000009210	R3HCC1	97	59.036	Canis_familiaris
ENSRNOG00000016777	AABR07018321.1	73	55.581	ENSCAFG00020012870	R3HCC1	87	55.319	Canis_lupus_dingo
ENSRNOG00000016777	AABR07018321.1	82	60.575	ENSCHIG00000009107	R3HCC1	99	62.012	Capra_hircus
ENSRNOG00000016777	AABR07018321.1	82	65.440	ENSTSYG00000000511	R3HCC1	77	65.164	Carlito_syrichta
ENSRNOG00000016777	AABR07018321.1	74	56.125	ENSCAPG00000015813	R3HCC1	100	53.898	Cavia_aperea
ENSRNOG00000016777	AABR07018321.1	81	63.544	ENSCPOG00000009696	R3HCC1	100	61.711	Cavia_porcellus
ENSRNOG00000016777	AABR07018321.1	85	57.336	ENSCCAG00000037811	R3HCC1	98	63.391	Cebus_capucinus
ENSRNOG00000016777	AABR07018321.1	70	79.394	ENSCATG00000032971	R3HCC1	98	93.478	Cercocebus_atys
ENSRNOG00000016777	AABR07018321.1	85	57.339	ENSCSAG00000016250	R3HCC1	96	63.065	Chlorocebus_sabaeus
ENSRNOG00000016777	AABR07018321.1	72	76.364	ENSCHOG00000000396	R3HCC1	98	61.446	Choloepus_hoffmanni
ENSRNOG00000016777	AABR07018321.1	85	63.137	ENSCANG00000029441	R3HCC1	98	93.478	Colobus_angolensis_palliatus
ENSRNOG00000016777	AABR07018321.1	82	79.918	ENSCGRG00001014977	R3hcc1	100	78.850	Cricetulus_griseus_chok1gshd
ENSRNOG00000016777	AABR07018321.1	82	79.918	ENSCGRG00000004454	R3hcc1	100	78.850	Cricetulus_griseus_crigri
ENSRNOG00000016777	AABR07018321.1	78	32.403	ENSCSEG00000005748	r3hcc1	82	46.875	Cynoglossus_semilaevis
ENSRNOG00000016777	AABR07018321.1	80	30.818	ENSDARG00000099593	r3hcc1	75	44.138	Danio_rerio
ENSRNOG00000016777	AABR07018321.1	87	58.189	ENSDNOG00000007168	R3HCC1	97	61.850	Dasypus_novemcinctus
ENSRNOG00000016777	AABR07018321.1	82	66.461	ENSDORG00000026365	R3hcc1	99	65.979	Dipodomys_ordii
ENSRNOG00000016777	AABR07018321.1	85	50.778	ENSETEG00000001147	R3HCC1	97	56.452	Echinops_telfairi
ENSRNOG00000016777	AABR07018321.1	82	61.972	ENSEASG00005018782	R3HCC1	81	63.380	Equus_asinus_asinus
ENSRNOG00000016777	AABR07018321.1	82	52.894	ENSECAG00000025013	R3HCC1	99	63.179	Equus_caballus
ENSRNOG00000016777	AABR07018321.1	82	60.327	ENSEEUG00000011918	R3HCC1	96	61.963	Erinaceus_europaeus
ENSRNOG00000016777	AABR07018321.1	75	32.527	ENSELUG00000023650	r3hcc1	69	49.474	Esox_lucius
ENSRNOG00000016777	AABR07018321.1	89	56.052	ENSFCAG00000012395	R3HCC1	96	65.984	Felis_catus
ENSRNOG00000016777	AABR07018321.1	79	39.157	ENSFALG00000001646	R3HCC1	82	38.048	Ficedula_albicollis
ENSRNOG00000016777	AABR07018321.1	82	64.694	ENSFDAG00000001572	R3HCC1	100	64.082	Fukomys_damarensis
ENSRNOG00000016777	AABR07018321.1	79	32.985	ENSGAFG00000008747	-	68	44.048	Gambusia_affinis
ENSRNOG00000016777	AABR07018321.1	83	32.661	ENSGACG00000008447	r3hcc1	71	43.827	Gasterosteus_aculeatus
ENSRNOG00000016777	AABR07018321.1	61	58.480	ENSGAGG00000018009	R3HCC1	51	61.935	Gopherus_agassizii
ENSRNOG00000016777	AABR07018321.1	85	61.220	ENSGGOG00000013817	R3HCC1	99	64.417	Gorilla_gorilla
ENSRNOG00000016777	AABR07018321.1	56	40.957	ENSHCOG00000011745	r3hcc1	73	43.949	Hippocampus_comes
ENSRNOG00000016777	AABR07018321.1	55	43.919	ENSIPUG00000024504	r3hcc1	69	41.892	Ictalurus_punctatus
ENSRNOG00000016777	AABR07018321.1	67	77.778	ENSSTOG00000027130	R3HCC1	85	77.778	Ictidomys_tridecemlineatus
ENSRNOG00000016777	AABR07018321.1	82	68.228	ENSJJAG00000013075	R3hcc1	99	68.432	Jaculus_jaculus
ENSRNOG00000016777	AABR07018321.1	79	38.608	ENSLACG00000011894	R3HCC1	97	37.759	Latimeria_chalumnae
ENSRNOG00000016777	AABR07018321.1	50	46.309	ENSLOCG00000015442	r3hcc1	71	46.853	Lepisosteus_oculatus
ENSRNOG00000016777	AABR07018321.1	85	63.198	ENSLAFG00000016137	R3HCC1	100	61.905	Loxodonta_africana
ENSRNOG00000016777	AABR07018321.1	70	78.788	ENSMFAG00000032894	R3HCC1	98	93.478	Macaca_fascicularis
ENSRNOG00000016777	AABR07018321.1	85	57.926	ENSMMUG00000016655	R3HCC1	94	63.654	Macaca_mulatta
ENSRNOG00000016777	AABR07018321.1	70	79.394	ENSMNEG00000043283	R3HCC1	98	93.478	Macaca_nemestrina
ENSRNOG00000016777	AABR07018321.1	70	79.394	ENSMLEG00000030147	R3HCC1	98	93.478	Mandrillus_leucophaeus
ENSRNOG00000016777	AABR07018321.1	53	58.025	ENSMGAG00000001356	R3HCC1	65	58.025	Meleagris_gallopavo
ENSRNOG00000016777	AABR07018321.1	82	76.531	ENSMAUG00000016096	R3hcc1	100	76.939	Mesocricetus_auratus
ENSRNOG00000016777	AABR07018321.1	83	65.726	ENSMICG00000011146	R3HCC1	95	65.244	Microcebus_murinus
ENSRNOG00000016777	AABR07018321.1	82	76.735	ENSMOCG00000018508	R3hcc1	100	76.939	Microtus_ochrogaster
ENSRNOG00000016777	AABR07018321.1	82	87.551	MGP_CAROLIEiJ_G0019467	R3hcc1	100	88.367	Mus_caroli
ENSRNOG00000016777	AABR07018321.1	82	87.551	ENSMUSG00000034194	R3hcc1	100	87.143	Mus_musculus
ENSRNOG00000016777	AABR07018321.1	82	82.863	MGP_PahariEiJ_G0030484	R3hcc1	100	85.887	Mus_pahari
ENSRNOG00000016777	AABR07018321.1	82	87.018	MGP_SPRETEiJ_G0020359	R3hcc1	100	86.613	Mus_spretus
ENSRNOG00000016777	AABR07018321.1	90	56.102	ENSMPUG00000003457	R3HCC1	98	60.838	Mustela_putorius_furo
ENSRNOG00000016777	AABR07018321.1	86	53.462	ENSMLUG00000000266	R3HCC1	98	59.730	Myotis_lucifugus
ENSRNOG00000016777	AABR07018321.1	75	56.570	ENSNLEG00000015944	R3HCC1	90	63.011	Nomascus_leucogenys
ENSRNOG00000016777	AABR07018321.1	64	74.251	ENSOPRG00000013390	R3HCC1	96	57.260	Ochotona_princeps
ENSRNOG00000016777	AABR07018321.1	80	62.134	ENSODEG00000007529	R3HCC1	100	59.429	Octodon_degus
ENSRNOG00000016777	AABR07018321.1	56	73.026	ENSOANG00000013877	R3HCC1	97	52.546	Ornithorhynchus_anatinus
ENSRNOG00000016777	AABR07018321.1	81	47.695	ENSOCUG00000023554	R3HCC1	85	59.016	Oryctolagus_cuniculus
ENSRNOG00000016777	AABR07018321.1	58	40.120	ENSOMEG00000000816	r3hcc1	85	40.491	Oryzias_melastigma
ENSRNOG00000016777	AABR07018321.1	83	54.125	ENSOGAG00000001291	R3HCC1	93	62.272	Otolemur_garnettii
ENSRNOG00000016777	AABR07018321.1	83	55.936	ENSOARG00000010146	R3HCC1	97	62.348	Ovis_aries
ENSRNOG00000016777	AABR07018321.1	85	57.843	ENSPPAG00000033165	R3HCC1	99	63.804	Pan_paniscus
ENSRNOG00000016777	AABR07018321.1	69	81.818	ENSPPRG00000002522	R3HCC1	99	65.849	Panthera_pardus
ENSRNOG00000016777	AABR07018321.1	63	81.212	ENSPTIG00000011230	R3HCC1	95	63.029	Panthera_tigris_altaica
ENSRNOG00000016777	AABR07018321.1	85	58.627	ENSPTRG00000020076	R3HCC1	96	64.833	Pan_troglodytes
ENSRNOG00000016777	AABR07018321.1	70	79.394	ENSPANG00000000453	R3HCC1	98	93.478	Papio_anubis
ENSRNOG00000016777	AABR07018321.1	55	48.052	ENSPKIG00000014426	-	90	48.052	Paramormyrops_kingsleyae
ENSRNOG00000016777	AABR07018321.1	56	48.052	ENSPKIG00000020397	-	83	48.052	Paramormyrops_kingsleyae
ENSRNOG00000016777	AABR07018321.1	81	44.939	ENSPSIG00000017664	R3HCC1	98	43.725	Pelodiscus_sinensis
ENSRNOG00000016777	AABR07018321.1	82	79.346	ENSPEMG00000007118	R3hcc1	100	79.346	Peromyscus_maniculatus_bairdii
ENSRNOG00000016777	AABR07018321.1	74	47.333	ENSPCIG00000022718	-	83	43.805	Phascolarctos_cinereus
ENSRNOG00000016777	AABR07018321.1	79	31.078	ENSPFOG00000022301	r3hcc1	73	41.818	Poecilia_formosa
ENSRNOG00000016777	AABR07018321.1	79	31.078	ENSPMEG00000022515	r3hcc1	73	41.818	Poecilia_mexicana
ENSRNOG00000016777	AABR07018321.1	76	54.825	ENSPPYG00000018436	R3HCC1	99	61.758	Pongo_abelii
ENSRNOG00000016777	AABR07018321.1	55	80.952	ENSPCAG00000012229	R3HCC1	69	83.544	Procavia_capensis
ENSRNOG00000016777	AABR07018321.1	82	63.039	ENSPCOG00000027554	R3HCC1	99	64.682	Propithecus_coquereli
ENSRNOG00000016777	AABR07018321.1	73	79.141	ENSPVAG00000009829	R3HCC1	99	62.103	Pteropus_vampyrus
ENSRNOG00000016777	AABR07018321.1	70	80.000	ENSRBIG00000028045	R3HCC1	98	93.478	Rhinopithecus_bieti
ENSRNOG00000016777	AABR07018321.1	90	61.142	ENSRROG00000031126	R3HCC1	98	93.478	Rhinopithecus_roxellana
ENSRNOG00000016777	AABR07018321.1	82	63.299	ENSSBOG00000022590	R3HCC1	99	63.599	Saimiri_boliviensis_boliviensis
ENSRNOG00000016777	AABR07018321.1	75	31.209	ENSSMAG00000008647	r3hcc1	72	45.625	Scophthalmus_maximus
ENSRNOG00000016777	AABR07018321.1	53	41.618	ENSSDUG00000022786	r3hcc1	74	44.654	Seriola_dumerili
ENSRNOG00000016777	AABR07018321.1	53	41.618	ENSSLDG00000019031	r3hcc1	69	44.654	Seriola_lalandi_dorsalis
ENSRNOG00000016777	AABR07018321.1	77	31.027	ENSSPAG00000013497	r3hcc1	68	48.299	Stegastes_partitus
ENSRNOG00000016777	AABR07018321.1	82	56.592	ENSSSCG00000037347	-	93	56.998	Sus_scrofa
ENSRNOG00000016777	AABR07018321.1	83	63.821	ENSSSCG00000039915	-	94	62.978	Sus_scrofa
ENSRNOG00000016777	AABR07018321.1	51	38.596	ENSTRUG00000015880	r3hcc1	75	38.922	Takifugu_rubripes
ENSRNOG00000016777	AABR07018321.1	81	62.526	ENSUAMG00000007344	R3HCC1	98	62.810	Ursus_americanus
ENSRNOG00000016777	AABR07018321.1	83	60.359	ENSVVUG00000005056	R3HCC1	100	58.550	Vulpes_vulpes
ENSRNOG00000016777	AABR07018321.1	55	39.850	ENSXCOG00000017626	r3hcc1	63	41.875	Xiphophorus_couchianus
ENSRNOG00000016777	AABR07018321.1	58	40.523	ENSXMAG00000018375	r3hcc1	70	42.138	Xiphophorus_maculatus