Protein ID | Domain | Pfam ID | E-value | Domain number | Total number |
---|---|---|---|---|---|
ENSRNOP00000034183 | APOBEC_N | PF08210.11 | 2.6e-84 | 1 | 2 |
ENSRNOP00000034183 | APOBEC_N | PF08210.11 | 2.6e-84 | 2 | 2 |
ENSRNOP00000034183 | APOBEC_C | PF05240.14 | 1.8e-55 | 1 | 2 |
ENSRNOP00000034183 | APOBEC_C | PF05240.14 | 1.8e-55 | 2 | 2 |
Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENSRNOT00000037134 | - | 1961 | XM_008765715 | ENSRNOP00000034183 | 396 (aa) | XP_008763937 | F7EWS7 |
Pathway ID | Pathway Name | Source |
---|---|---|
rno05170 | Human immunodeficiency virus 1 infection | KEGG |
Ensembl ID | Gene Symbol | Coverage | Identiy | Paralog | Gene Symbol | Coverage | Identiy |
---|---|---|---|---|---|---|---|
ENSRNOG00000016852 | Apobec3 | 85 | 40.244 | ENSRNOG00000015478 | Aicda | 88 | 40.244 |
ENSRNOG00000016852 | Apobec3 | 86 | 33.333 | ENSRNOG00000012303 | Apobec2 | 77 | 33.333 |
ENSRNOG00000016852 | Apobec3 | 72 | 33.628 | ENSRNOG00000015411 | Apobec1 | 76 | 33.628 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSRNOG00000016852 | Apobec3 | 87 | 48.663 | ENSG00000100298 | APOBEC3H | 100 | 48.663 | Homo_sapiens |
ENSRNOG00000016852 | Apobec3 | 92 | 37.939 | ENSAMEG00000010818 | - | 98 | 37.939 | Ailuropoda_melanoleuca |
ENSRNOG00000016852 | Apobec3 | 90 | 48.168 | ENSANAG00000025410 | APOBEC3H | 86 | 48.168 | Aotus_nancymaae |
ENSRNOG00000016852 | Apobec3 | 91 | 48.889 | ENSBTAG00000007755 | APOBEC3H | 94 | 44.565 | Bos_taurus |
ENSRNOG00000016852 | Apobec3 | 86 | 45.946 | ENSCJAG00000012524 | APOBEC3H | 91 | 46.853 | Callithrix_jacchus |
ENSRNOG00000016852 | Apobec3 | 91 | 45.556 | ENSCAFG00000001361 | APOBEC3Z3 | 97 | 45.556 | Canis_familiaris |
ENSRNOG00000016852 | Apobec3 | 93 | 44.624 | ENSCAFG00020002584 | - | 99 | 44.624 | Canis_lupus_dingo |
ENSRNOG00000016852 | Apobec3 | 91 | 49.444 | ENSCHIG00000026580 | - | 98 | 45.430 | Capra_hircus |
ENSRNOG00000016852 | Apobec3 | 85 | 51.977 | ENSTSYG00000032894 | - | 100 | 51.977 | Carlito_syrichta |
ENSRNOG00000016852 | Apobec3 | 93 | 46.933 | ENSCPOG00000009257 | - | 88 | 46.933 | Cavia_porcellus |
ENSRNOG00000016852 | Apobec3 | 87 | 45.989 | ENSCCAG00000008525 | APOBEC3H | 91 | 46.528 | Cebus_capucinus |
ENSRNOG00000016852 | Apobec3 | 86 | 50.538 | ENSCATG00000030302 | APOBEC3H | 100 | 50.538 | Cercocebus_atys |
ENSRNOG00000016852 | Apobec3 | 90 | 50.543 | ENSCLAG00000016615 | - | 89 | 50.543 | Chinchilla_lanigera |
ENSRNOG00000016852 | Apobec3 | 86 | 51.596 | ENSCSAG00000006371 | APOBEC3H | 87 | 51.596 | Chlorocebus_sabaeus |
ENSRNOG00000016852 | Apobec3 | 100 | 71.859 | ENSCGRG00001022976 | Apobec3 | 96 | 71.859 | Cricetulus_griseus_chok1gshd |
ENSRNOG00000016852 | Apobec3 | 100 | 71.859 | ENSCGRG00000005621 | Apobec3 | 96 | 71.859 | Cricetulus_griseus_crigri |
ENSRNOG00000016852 | Apobec3 | 98 | 50.754 | ENSDORG00000027271 | - | 100 | 50.754 | Dipodomys_ordii |
ENSRNOG00000016852 | Apobec3 | 99 | 48.901 | ENSECAG00000007726 | APOBEC3H | 90 | 48.901 | Equus_caballus |
ENSRNOG00000016852 | Apobec3 | 91 | 51.934 | ENSFCAG00000005251 | APOBEC3Z3 | 96 | 51.934 | Felis_catus |
ENSRNOG00000016852 | Apobec3 | 85 | 49.727 | ENSSTOG00000007125 | - | 85 | 49.727 | Ictidomys_tridecemlineatus |
ENSRNOG00000016852 | Apobec3 | 96 | 52.408 | ENSJJAG00000016840 | - | 90 | 52.408 | Jaculus_jaculus |
ENSRNOG00000016852 | Apobec3 | 93 | 44.236 | ENSLAFG00000027404 | - | 98 | 44.236 | Loxodonta_africana |
ENSRNOG00000016852 | Apobec3 | 90 | 51.613 | ENSMFAG00000031827 | APOBEC3H | 94 | 51.613 | Macaca_fascicularis |
ENSRNOG00000016852 | Apobec3 | 90 | 51.075 | ENSMMUG00000001016 | APOBEC3H | 94 | 51.075 | Macaca_mulatta |
ENSRNOG00000016852 | Apobec3 | 90 | 51.613 | ENSMNEG00000039259 | APOBEC3H | 94 | 51.613 | Macaca_nemestrina |
ENSRNOG00000016852 | Apobec3 | 86 | 51.075 | ENSMLEG00000033417 | APOBEC3H | 91 | 51.075 | Mandrillus_leucophaeus |
ENSRNOG00000016852 | Apobec3 | 100 | 70.101 | ENSMAUG00000011683 | Apobec3 | 98 | 69.797 | Mesocricetus_auratus |
ENSRNOG00000016852 | Apobec3 | 100 | 65.291 | ENSMOCG00000021576 | Apobec3 | 99 | 65.281 | Microtus_ochrogaster |
ENSRNOG00000016852 | Apobec3 | 100 | 70.707 | MGP_CAROLIEiJ_G0020029 | Apobec3 | 98 | 72.619 | Mus_caroli |
ENSRNOG00000016852 | Apobec3 | 100 | 70.707 | ENSMUSG00000009585 | Apobec3 | 100 | 69.697 | Mus_musculus |
ENSRNOG00000016852 | Apobec3 | 100 | 74.559 | MGP_PahariEiJ_G0020031 | - | 98 | 74.365 | Mus_pahari |
ENSRNOG00000016852 | Apobec3 | 100 | 70.202 | MGP_SPRETEiJ_G0020927 | Apobec3 | 98 | 72.619 | Mus_spretus |
ENSRNOG00000016852 | Apobec3 | 92 | 44.920 | ENSMPUG00000013239 | - | 94 | 44.920 | Mustela_putorius_furo |
ENSRNOG00000016852 | Apobec3 | 100 | 56.659 | ENSNGAG00000018998 | Apobec3 | 95 | 58.793 | Nannospalax_galili |
ENSRNOG00000016852 | Apobec3 | 83 | 50.000 | ENSNLEG00000015218 | - | 87 | 50.000 | Nomascus_leucogenys |
ENSRNOG00000016852 | Apobec3 | 100 | 42.680 | ENSOCUG00000023913 | - | 99 | 42.680 | Oryctolagus_cuniculus |
ENSRNOG00000016852 | Apobec3 | 92 | 45.699 | ENSOARG00000016290 | APOBEC3F | 98 | 45.699 | Ovis_aries |
ENSRNOG00000016852 | Apobec3 | 84 | 48.128 | ENSPPAG00000036522 | APOBEC3H | 100 | 48.128 | Pan_paniscus |
ENSRNOG00000016852 | Apobec3 | 91 | 54.144 | ENSPPRG00000003941 | - | 96 | 54.144 | Panthera_pardus |
ENSRNOG00000016852 | Apobec3 | 89 | 42.784 | ENSPPRG00000003675 | - | 98 | 42.784 | Panthera_pardus |
ENSRNOG00000016852 | Apobec3 | 91 | 54.144 | ENSPTIG00000010283 | - | 96 | 54.144 | Panthera_tigris_altaica |
ENSRNOG00000016852 | Apobec3 | 84 | 48.128 | ENSPTRG00000014390 | APOBEC3H | 100 | 48.128 | Pan_troglodytes |
ENSRNOG00000016852 | Apobec3 | 86 | 51.075 | ENSPANG00000010774 | APOBEC3H | 94 | 48.925 | Papio_anubis |
ENSRNOG00000016852 | Apobec3 | 100 | 65.882 | ENSPEMG00000000456 | Apobec3 | 96 | 65.882 | Peromyscus_maniculatus_bairdii |
ENSRNOG00000016852 | Apobec3 | 84 | 48.947 | ENSPPYG00000011834 | - | 88 | 48.947 | Pongo_abelii |
ENSRNOG00000016852 | Apobec3 | 84 | 37.989 | ENSPCAG00000015655 | - | 99 | 37.989 | Procavia_capensis |
ENSRNOG00000016852 | Apobec3 | 62 | 48.819 | ENSPVAG00000024161 | - | 93 | 48.819 | Pteropus_vampyrus |
ENSRNOG00000016852 | Apobec3 | 85 | 49.721 | ENSPVAG00000009462 | - | 99 | 49.721 | Pteropus_vampyrus |
ENSRNOG00000016852 | Apobec3 | 62 | 48.031 | ENSPVAG00000024267 | - | 93 | 48.031 | Pteropus_vampyrus |
ENSRNOG00000016852 | Apobec3 | 86 | 49.198 | ENSRBIG00000029088 | APOBEC3H | 91 | 49.189 | Rhinopithecus_bieti |
ENSRNOG00000016852 | Apobec3 | 91 | 47.000 | ENSRROG00000024699 | APOBEC3H | 91 | 49.189 | Rhinopithecus_roxellana |
ENSRNOG00000016852 | Apobec3 | 86 | 51.351 | ENSSBOG00000030005 | APOBEC3H | 100 | 52.448 | Saimiri_boliviensis_boliviensis |
ENSRNOG00000016852 | Apobec3 | 98 | 42.040 | ENSSSCG00000000091 | APOBEC3B | 93 | 42.040 | Sus_scrofa |
ENSRNOG00000016852 | Apobec3 | 83 | 45.665 | ENSTBEG00000001532 | - | 100 | 45.665 | Tupaia_belangeri |
ENSRNOG00000016852 | Apobec3 | 85 | 45.856 | ENSTTRG00000001266 | - | 100 | 45.856 | Tursiops_truncatus |
ENSRNOG00000016852 | Apobec3 | 92 | 47.120 | ENSUAMG00000004427 | - | 86 | 47.120 | Ursus_americanus |
ENSRNOG00000016852 | Apobec3 | 92 | 49.457 | ENSUMAG00000014435 | - | 99 | 49.457 | Ursus_maritimus |
ENSRNOG00000016852 | Apobec3 | 57 | 44.355 | ENSVPAG00000011108 | - | 98 | 44.355 | Vicugna_pacos |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0000932 | P-body | - | ISO | Component |
GO:0002244 | hematopoietic progenitor cell differentiation | - | ISO | Process |
GO:0003723 | RNA binding | 21873635. | IBA | Function |
GO:0004126 | cytidine deaminase activity | 21873635. | IBA | Function |
GO:0004126 | cytidine deaminase activity | - | ISO | Function |
GO:0005634 | nucleus | 21873635. | IBA | Component |
GO:0005634 | nucleus | - | ISO | Component |
GO:0005737 | cytoplasm | 21873635. | IBA | Component |
GO:0005737 | cytoplasm | - | ISO | Component |
GO:0005737 | cytoplasm | - | ISS | Component |
GO:0008270 | zinc ion binding | - | IEA | Function |
GO:0009972 | cytidine deamination | - | IEA | Process |
GO:0010529 | negative regulation of transposition | - | ISO | Process |
GO:0010529 | negative regulation of transposition | - | ISS | Process |
GO:0016554 | cytidine to uridine editing | 21873635. | IBA | Process |
GO:0016787 | hydrolase activity | - | IEA | Function |
GO:0045071 | negative regulation of viral genome replication | - | ISO | Process |
GO:0045087 | innate immune response | - | IEA | Process |
GO:0045869 | negative regulation of single stranded viral RNA replication via double stranded DNA intermediate | - | ISO | Process |
GO:0048525 | negative regulation of viral process | - | ISO | Process |
GO:0050688 | regulation of defense response to virus | - | ISO | Process |
GO:0051607 | defense response to virus | - | IEA | Process |
GO:0051607 | defense response to virus | - | ISO | Process |
GO:0070383 | DNA cytosine deamination | - | ISO | Process |
GO:0080111 | DNA demethylation | 21873635. | IBA | Process |
GO:1903900 | regulation of viral life cycle | - | ISO | Process |