EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000017064 (Gene tree)
Gene ID: 292129
Gene Symbol: Tdrd1
Alias: LOC292129
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 43746 bases
Position: chr1:277641512-277685257
Accession: 1306140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000023024	TUDOR	PF00567.24	3.1e-127	1	4
ENSRNOP00000023024	TUDOR	PF00567.24	3.1e-127	2	4
ENSRNOP00000023024	TUDOR	PF00567.24	3.1e-127	3	4
ENSRNOP00000023024	TUDOR	PF00567.24	3.1e-127	4	4
ENSRNOP00000075160	TUDOR	PF00567.24	3.1e-127	1	4
ENSRNOP00000075160	TUDOR	PF00567.24	3.1e-127	2	4
ENSRNOP00000075160	TUDOR	PF00567.24	3.1e-127	3	4
ENSRNOP00000075160	TUDOR	PF00567.24	3.1e-127	4	4

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000023024	-	4905	XM_008760526	ENSRNOP00000023024	1173 (aa)	XP_008758748	D4A3N0
ENSRNOT00000084861	-	5130	XM_006231642	ENSRNOP00000075160	1173 (aa)	XP_006231704	D4A3N0

Gene Model

Click here to download ENSRNOG00000017064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000017064	Tdrd1	70	33.333	ENSRNOG00000008059	Rnf17	73	33.333
ENSRNOG00000017064	Tdrd1	75	32.222	ENSRNOG00000025693	Tdrd6	71	32.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000017064	Tdrd1	99	75.510	ENSG00000095627	TDRD1	99	75.510	Homo_sapiens
ENSRNOG00000017064	Tdrd1	83	33.301	ENSAPOG00000023199	tdrd1	89	33.397	Acanthochromis_polyacanthus
ENSRNOG00000017064	Tdrd1	100	72.511	ENSAMEG00000015182	TDRD1	99	72.511	Ailuropoda_melanoleuca
ENSRNOG00000017064	Tdrd1	82	35.010	ENSACIG00000010576	tdrd1	85	35.010	Amphilophus_citrinellus
ENSRNOG00000017064	Tdrd1	86	34.764	ENSAOCG00000007059	tdrd1	92	33.858	Amphiprion_ocellaris
ENSRNOG00000017064	Tdrd1	85	33.719	ENSAPEG00000017049	tdrd1	88	33.622	Amphiprion_percula
ENSRNOG00000017064	Tdrd1	85	33.397	ENSATEG00000021627	tdrd1	88	33.397	Anabas_testudineus
ENSRNOG00000017064	Tdrd1	89	44.612	ENSAPLG00000012609	TDRD1	99	44.612	Anas_platyrhynchos
ENSRNOG00000017064	Tdrd1	99	37.998	ENSACAG00000009854	TDRD1	99	37.998	Anolis_carolinensis
ENSRNOG00000017064	Tdrd1	99	72.917	ENSANAG00000035710	TDRD1	98	72.917	Aotus_nancymaae
ENSRNOG00000017064	Tdrd1	89	33.732	ENSACLG00000014107	tdrd1	89	33.732	Astatotilapia_calliptera
ENSRNOG00000017064	Tdrd1	86	34.193	ENSAMXG00000015146	tdrd1	87	34.193	Astyanax_mexicanus
ENSRNOG00000017064	Tdrd1	99	79.592	ENSBTAG00000006855	TDRD1	99	79.592	Bos_taurus
ENSRNOG00000017064	Tdrd1	98	87.179	ENSCJAG00000019270	TDRD1	98	87.179	Callithrix_jacchus
ENSRNOG00000017064	Tdrd1	100	72.000	ENSCAFG00000011266	TDRD1	100	72.000	Canis_familiaris
ENSRNOG00000017064	Tdrd1	99	77.551	ENSCAFG00020012373	TDRD1	99	77.551	Canis_lupus_dingo
ENSRNOG00000017064	Tdrd1	100	72.095	ENSCHIG00000012766	TDRD1	99	72.095	Capra_hircus
ENSRNOG00000017064	Tdrd1	98	94.737	ENSTSYG00000004935	TDRD1	98	94.737	Carlito_syrichta
ENSRNOG00000017064	Tdrd1	100	67.149	ENSCPOG00000004190	TDRD1	100	67.489	Cavia_porcellus
ENSRNOG00000017064	Tdrd1	99	75.510	ENSCCAG00000027375	TDRD1	99	75.510	Cebus_capucinus
ENSRNOG00000017064	Tdrd1	99	75.000	ENSCATG00000035999	TDRD1	98	75.000	Cercocebus_atys
ENSRNOG00000017064	Tdrd1	99	72.379	ENSCLAG00000003935	TDRD1	99	72.379	Chinchilla_lanigera
ENSRNOG00000017064	Tdrd1	99	72.232	ENSCSAG00000005071	TDRD1	98	72.232	Chlorocebus_sabaeus
ENSRNOG00000017064	Tdrd1	99	85.714	ENSCHOG00000001690	TDRD1	92	85.714	Choloepus_hoffmanni
ENSRNOG00000017064	Tdrd1	99	50.555	ENSCPBG00000003780	TDRD1	99	49.578	Chrysemys_picta_bellii
ENSRNOG00000017064	Tdrd1	99	72.270	ENSCANG00000035172	TDRD1	99	71.380	Colobus_angolensis_palliatus
ENSRNOG00000017064	Tdrd1	97	83.735	ENSCGRG00001004632	Tdrd1	100	83.735	Cricetulus_griseus_chok1gshd
ENSRNOG00000017064	Tdrd1	100	81.687	ENSCGRG00000004981	Tdrd1	100	81.687	Cricetulus_griseus_crigri
ENSRNOG00000017064	Tdrd1	85	33.266	ENSCSEG00000006983	tdrd1	91	32.975	Cynoglossus_semilaevis
ENSRNOG00000017064	Tdrd1	79	32.288	ENSCVAG00000020980	tdrd1	91	32.288	Cyprinodon_variegatus
ENSRNOG00000017064	Tdrd1	85	36.964	ENSDARG00000007465	tdrd1	89	36.276	Danio_rerio
ENSRNOG00000017064	Tdrd1	100	70.433	ENSDNOG00000012114	TDRD1	99	70.433	Dasypus_novemcinctus
ENSRNOG00000017064	Tdrd1	100	73.152	ENSDORG00000009986	Tdrd1	100	73.152	Dipodomys_ordii
ENSRNOG00000017064	Tdrd1	90	67.143	ENSETEG00000020143	TDRD1	83	67.143	Echinops_telfairi
ENSRNOG00000017064	Tdrd1	99	75.510	ENSEASG00005014802	TDRD1	99	75.510	Equus_asinus_asinus
ENSRNOG00000017064	Tdrd1	99	73.684	ENSECAG00000009748	TDRD1	96	73.684	Equus_caballus
ENSRNOG00000017064	Tdrd1	99	68.143	ENSEEUG00000010076	TDRD1	98	68.143	Erinaceus_europaeus
ENSRNOG00000017064	Tdrd1	88	34.144	ENSELUG00000024364	tdrd1	89	34.144	Esox_lucius
ENSRNOG00000017064	Tdrd1	99	77.083	ENSFCAG00000000632	TDRD1	98	77.083	Felis_catus
ENSRNOG00000017064	Tdrd1	79	44.286	ENSFALG00000002237	TDRD1	100	42.276	Ficedula_albicollis
ENSRNOG00000017064	Tdrd1	99	72.222	ENSFDAG00000013225	TDRD1	99	72.222	Fukomys_damarensis
ENSRNOG00000017064	Tdrd1	84	31.137	ENSFHEG00000009203	tdrd1	91	31.137	Fundulus_heteroclitus
ENSRNOG00000017064	Tdrd1	71	37.143	ENSGMOG00000016797	-	68	37.143	Gadus_morhua
ENSRNOG00000017064	Tdrd1	90	43.679	ENSGALG00000046180	TDRD1	97	43.679	Gallus_gallus
ENSRNOG00000017064	Tdrd1	86	32.231	ENSGAFG00000002668	tdrd1	94	32.231	Gambusia_affinis
ENSRNOG00000017064	Tdrd1	79	36.618	ENSGACG00000006590	tdrd1	99	36.618	Gasterosteus_aculeatus
ENSRNOG00000017064	Tdrd1	99	75.000	ENSGGOG00000004250	TDRD1	98	75.000	Gorilla_gorilla
ENSRNOG00000017064	Tdrd1	89	33.426	ENSHBUG00000005216	tdrd1	88	33.426	Haplochromis_burtoni
ENSRNOG00000017064	Tdrd1	100	69.074	ENSHGLG00000010877	TDRD1	100	69.074	Heterocephalus_glaber_female
ENSRNOG00000017064	Tdrd1	95	72.676	ENSHGLG00100013857	TDRD1	99	72.676	Heterocephalus_glaber_male
ENSRNOG00000017064	Tdrd1	82	33.333	ENSHCOG00000002840	tdrd1	83	33.287	Hippocampus_comes
ENSRNOG00000017064	Tdrd1	86	34.646	ENSIPUG00000017232	tdrd1	89	35.065	Ictalurus_punctatus
ENSRNOG00000017064	Tdrd1	99	79.592	ENSSTOG00000003221	TDRD1	99	79.592	Ictidomys_tridecemlineatus
ENSRNOG00000017064	Tdrd1	100	74.446	ENSJJAG00000014720	Tdrd1	100	74.446	Jaculus_jaculus
ENSRNOG00000017064	Tdrd1	82	34.769	ENSKMAG00000018558	tdrd1	89	34.769	Kryptolebias_marmoratus
ENSRNOG00000017064	Tdrd1	86	33.713	ENSLBEG00000004161	tdrd1	85	33.807	Labrus_bergylta
ENSRNOG00000017064	Tdrd1	97	43.127	ENSLACG00000011559	TDRD1	99	43.127	Latimeria_chalumnae
ENSRNOG00000017064	Tdrd1	87	35.379	ENSLOCG00000012030	tdrd1	100	37.248	Lepisosteus_oculatus
ENSRNOG00000017064	Tdrd1	79	71.214	ENSLAFG00000011575	TDRD1	100	71.214	Loxodonta_africana
ENSRNOG00000017064	Tdrd1	99	75.000	ENSMFAG00000043487	TDRD1	98	75.000	Macaca_fascicularis
ENSRNOG00000017064	Tdrd1	99	75.000	ENSMMUG00000022517	TDRD1	98	75.000	Macaca_mulatta
ENSRNOG00000017064	Tdrd1	99	75.000	ENSMNEG00000031108	TDRD1	98	75.000	Macaca_nemestrina
ENSRNOG00000017064	Tdrd1	99	75.000	ENSMLEG00000032281	TDRD1	98	75.000	Mandrillus_leucophaeus
ENSRNOG00000017064	Tdrd1	87	34.334	ENSMAMG00000015287	tdrd1	93	34.363	Mastacembelus_armatus
ENSRNOG00000017064	Tdrd1	89	33.732	ENSMZEG00005025315	tdrd1	89	33.732	Maylandia_zebra
ENSRNOG00000017064	Tdrd1	86	58.537	ENSMGAG00000011067	TDRD1	99	58.537	Meleagris_gallopavo
ENSRNOG00000017064	Tdrd1	98	73.146	ENSMAUG00000012164	Tdrd1	99	73.599	Mesocricetus_auratus
ENSRNOG00000017064	Tdrd1	99	79.167	ENSMICG00000016190	TDRD1	98	79.167	Microcebus_murinus
ENSRNOG00000017064	Tdrd1	100	82.498	ENSMOCG00000022360	Tdrd1	100	82.498	Microtus_ochrogaster
ENSRNOG00000017064	Tdrd1	80	35.264	ENSMMOG00000014068	tdrd1	83	35.097	Mola_mola
ENSRNOG00000017064	Tdrd1	99	60.560	ENSMODG00000009788	TDRD1	99	60.560	Monodelphis_domestica
ENSRNOG00000017064	Tdrd1	85	34.195	ENSMALG00000022115	tdrd1	91	34.291	Monopterus_albus
ENSRNOG00000017064	Tdrd1	100	87.479	MGP_CAROLIEiJ_G0023095	Tdrd1	100	87.479	Mus_caroli
ENSRNOG00000017064	Tdrd1	100	87.564	ENSMUSG00000025081	Tdrd1	100	87.564	Mus_musculus
ENSRNOG00000017064	Tdrd1	99	90.114	MGP_PahariEiJ_G0014583	Tdrd1	100	90.114	Mus_pahari
ENSRNOG00000017064	Tdrd1	100	87.905	MGP_SPRETEiJ_G0024016	Tdrd1	100	87.905	Mus_spretus
ENSRNOG00000017064	Tdrd1	100	71.332	ENSMPUG00000001987	TDRD1	99	71.332	Mustela_putorius_furo
ENSRNOG00000017064	Tdrd1	100	78.450	ENSNGAG00000015231	Tdrd1	100	78.450	Nannospalax_galili
ENSRNOG00000017064	Tdrd1	83	33.960	ENSNBRG00000017920	tdrd1	85	33.960	Neolamprologus_brichardi
ENSRNOG00000017064	Tdrd1	99	71.429	ENSNLEG00000016228	TDRD1	98	71.429	Nomascus_leucogenys
ENSRNOG00000017064	Tdrd1	99	58.185	ENSMEUG00000007717	TDRD1	99	58.185	Notamacropus_eugenii
ENSRNOG00000017064	Tdrd1	99	68.058	ENSOPRG00000009180	TDRD1	99	68.058	Ochotona_princeps
ENSRNOG00000017064	Tdrd1	100	69.643	ENSODEG00000011965	TDRD1	100	69.643	Octodon_degus
ENSRNOG00000017064	Tdrd1	89	33.613	ENSONIG00000016382	tdrd1	91	32.930	Oreochromis_niloticus
ENSRNOG00000017064	Tdrd1	99	51.397	ENSOANG00000001562	TDRD1	99	51.397	Ornithorhynchus_anatinus
ENSRNOG00000017064	Tdrd1	99	71.687	ENSOCUG00000025327	TDRD1	100	71.687	Oryctolagus_cuniculus
ENSRNOG00000017064	Tdrd1	86	34.324	ENSORLG00000004833	tdrd1	90	34.324	Oryzias_latipes
ENSRNOG00000017064	Tdrd1	89	34.423	ENSORLG00020019231	tdrd1	92	35.294	Oryzias_latipes_hni
ENSRNOG00000017064	Tdrd1	89	34.745	ENSORLG00015017184	tdrd1	89	34.745	Oryzias_latipes_hsok
ENSRNOG00000017064	Tdrd1	83	34.698	ENSOMEG00000023637	tdrd1	83	34.698	Oryzias_melastigma
ENSRNOG00000017064	Tdrd1	100	73.362	ENSOGAG00000001370	TDRD1	99	73.362	Otolemur_garnettii
ENSRNOG00000017064	Tdrd1	100	71.963	ENSOARG00000014200	-	98	71.963	Ovis_aries
ENSRNOG00000017064	Tdrd1	99	75.000	ENSPPAG00000041621	TDRD1	98	75.000	Pan_paniscus
ENSRNOG00000017064	Tdrd1	99	77.083	ENSPPRG00000000191	TDRD1	98	77.083	Panthera_pardus
ENSRNOG00000017064	Tdrd1	98	90.000	ENSPTIG00000010264	TDRD1	99	90.000	Panthera_tigris_altaica
ENSRNOG00000017064	Tdrd1	99	75.000	ENSPTRG00000002958	TDRD1	98	75.000	Pan_troglodytes
ENSRNOG00000017064	Tdrd1	99	75.000	ENSPANG00000020752	TDRD1	98	75.000	Papio_anubis
ENSRNOG00000017064	Tdrd1	85	36.187	ENSPKIG00000010586	tdrd1	91	36.187	Paramormyrops_kingsleyae
ENSRNOG00000017064	Tdrd1	99	50.084	ENSPSIG00000014655	TDRD1	99	50.084	Pelodiscus_sinensis
ENSRNOG00000017064	Tdrd1	81	32.883	ENSPMGG00000018890	tdrd1	95	32.883	Periophthalmus_magnuspinnatus
ENSRNOG00000017064	Tdrd1	100	84.412	ENSPEMG00000004582	Tdrd1	100	84.412	Peromyscus_maniculatus_bairdii
ENSRNOG00000017064	Tdrd1	98	80.488	ENSPCIG00000009739	TDRD1	99	80.488	Phascolarctos_cinereus
ENSRNOG00000017064	Tdrd1	81	33.970	ENSPFOG00000002145	tdrd1	86	33.970	Poecilia_formosa
ENSRNOG00000017064	Tdrd1	86	33.633	ENSPLAG00000010241	tdrd1	85	33.633	Poecilia_latipinna
ENSRNOG00000017064	Tdrd1	86	34.043	ENSPMEG00000021893	tdrd1	85	34.043	Poecilia_mexicana
ENSRNOG00000017064	Tdrd1	83	34.043	ENSPREG00000022663	tdrd1	83	34.043	Poecilia_reticulata
ENSRNOG00000017064	Tdrd1	99	70.187	ENSPPYG00000002671	TDRD1	98	70.187	Pongo_abelii
ENSRNOG00000017064	Tdrd1	97	63.438	ENSPCAG00000006692	TDRD1	96	63.438	Procavia_capensis
ENSRNOG00000017064	Tdrd1	99	81.250	ENSPCOG00000026619	TDRD1	98	81.250	Propithecus_coquereli
ENSRNOG00000017064	Tdrd1	97	72.091	ENSPVAG00000003055	TDRD1	99	70.819	Pteropus_vampyrus
ENSRNOG00000017064	Tdrd1	83	34.252	ENSPNYG00000001706	tdrd1	84	34.252	Pundamilia_nyererei
ENSRNOG00000017064	Tdrd1	84	35.415	ENSPNAG00000005831	tdrd1	94	34.270	Pygocentrus_nattereri
ENSRNOG00000017064	Tdrd1	96	71.581	ENSRBIG00000029668	TDRD1	97	72.296	Rhinopithecus_bieti
ENSRNOG00000017064	Tdrd1	99	73.469	ENSRROG00000043379	TDRD1	99	73.469	Rhinopithecus_roxellana
ENSRNOG00000017064	Tdrd1	99	75.000	ENSSBOG00000023561	TDRD1	98	75.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000017064	Tdrd1	99	61.186	ENSSHAG00000014311	TDRD1	99	61.186	Sarcophilus_harrisii
ENSRNOG00000017064	Tdrd1	80	35.036	ENSSFOG00015022020	tdrd1	91	35.036	Scleropages_formosus
ENSRNOG00000017064	Tdrd1	83	34.446	ENSSMAG00000019271	tdrd1	88	34.446	Scophthalmus_maximus
ENSRNOG00000017064	Tdrd1	85	34.381	ENSSDUG00000022012	tdrd1	96	33.945	Seriola_dumerili
ENSRNOG00000017064	Tdrd1	85	33.842	ENSSLDG00000006423	tdrd1	94	33.842	Seriola_lalandi_dorsalis
ENSRNOG00000017064	Tdrd1	99	71.739	ENSSARG00000008828	TDRD1	82	71.739	Sorex_araneus
ENSRNOG00000017064	Tdrd1	99	44.378	ENSSPUG00000005015	TDRD1	99	44.378	Sphenodon_punctatus
ENSRNOG00000017064	Tdrd1	83	33.671	ENSSPAG00000018805	tdrd1	84	33.671	Stegastes_partitus
ENSRNOG00000017064	Tdrd1	100	71.745	ENSSSCG00000021075	TDRD1	99	71.745	Sus_scrofa
ENSRNOG00000017064	Tdrd1	79	45.207	ENSTGUG00000010905	TDRD1	99	45.351	Taeniopygia_guttata
ENSRNOG00000017064	Tdrd1	85	31.761	ENSTRUG00000012142	tdrd1	99	32.516	Takifugu_rubripes
ENSRNOG00000017064	Tdrd1	79	36.765	ENSTNIG00000018898	tdrd1	100	36.765	Tetraodon_nigroviridis
ENSRNOG00000017064	Tdrd1	86	70.698	ENSTBEG00000014978	-	55	70.698	Tupaia_belangeri
ENSRNOG00000017064	Tdrd1	99	67.632	ENSTBEG00000014417	-	98	67.632	Tupaia_belangeri
ENSRNOG00000017064	Tdrd1	99	69.761	ENSTTRG00000010147	TDRD1	99	69.761	Tursiops_truncatus
ENSRNOG00000017064	Tdrd1	99	79.592	ENSUAMG00000009025	TDRD1	99	79.592	Ursus_americanus
ENSRNOG00000017064	Tdrd1	99	79.592	ENSUMAG00000000705	TDRD1	99	79.592	Ursus_maritimus
ENSRNOG00000017064	Tdrd1	99	70.187	ENSVPAG00000004000	TDRD1	98	70.187	Vicugna_pacos
ENSRNOG00000017064	Tdrd1	100	72.147	ENSVVUG00000009750	TDRD1	100	72.147	Vulpes_vulpes
ENSRNOG00000017064	Tdrd1	75	34.496	ENSXCOG00000006412	tdrd1	91	34.496	Xiphophorus_couchianus
ENSRNOG00000017064	Tdrd1	86	33.694	ENSXMAG00000008104	tdrd1	91	33.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	-	ISO	Component
GO:0007281	germ cell development	-	IEA	Process
GO:0007281	germ cell development	-	ISO	Process
GO:0007283	spermatogenesis	-	IEA	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0031047	gene silencing by RNA	-	ISO	Process
GO:0033391	chromatoid body	-	IEA	Component
GO:0033391	chromatoid body	-	ISO	Component
GO:0034587	piRNA metabolic process	-	IEA	Process
GO:0034587	piRNA metabolic process	-	ISO	Process
GO:0043046	DNA methylation involved in gamete generation	-	IEA	Process
GO:0043046	DNA methylation involved in gamete generation	-	ISO	Process
GO:0043186	P granule	-	ISO	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0071546	pi-body	-	IEA	Component
GO:0071546	pi-body	-	ISO	Component
GO:1990904	ribonucleoprotein complex	-	ISO	Component