EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000017114 (Gene tree)
Gene ID: 84018
Gene Symbol: Synj2
Alias: -
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 96559 bases
Position: chr1:46835971-46932529
Accession: 69436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000063385	Exo_endo_phos	PF03372.23	5.2e-13	1	1
ENSRNOP00000062564	Exo_endo_phos	PF03372.23	6.9e-13	1	1
ENSRNOP00000059744	Exo_endo_phos	PF03372.23	7.5e-13	1	1
ENSRNOP00000063385	DUF1866	PF08952.11	7.2e-60	1	1
ENSRNOP00000062564	DUF1866	PF08952.11	9.8e-60	1	1
ENSRNOP00000059744	DUF1866	PF08952.11	1e-59	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000068476	-	4771	-	ENSRNOP00000063385	1178 (aa)	-	F1M2D6
ENSRNOT00000066798	-	4488	-	ENSRNOP00000059744	1495 (aa)	-	F1M0S5
ENSRNOT00000067661	-	4757	-	ENSRNOP00000062564	1426 (aa)	-	F1LPP1

Gene Model

Click here to download ENSRNOG00000017114's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno00562	Inositol phosphate metabolism	KEGG
rno01100	Metabolic pathways	KEGG
rno04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000017114	Synj2	82	54.938	ENSRNOG00000002051	Synj1	85	50.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000017114	Synj2	100	85.020	ENSG00000078269	SYNJ2	98	86.374	Homo_sapiens
ENSRNOG00000017114	Synj2	97	83.727	ENSAMEG00000009581	SYNJ2	99	77.344	Ailuropoda_melanoleuca
ENSRNOG00000017114	Synj2	96	74.329	ENSAPLG00000002563	SYNJ2	99	67.492	Anas_platyrhynchos
ENSRNOG00000017114	Synj2	98	70.788	ENSACAG00000004945	SYNJ2	90	69.699	Anolis_carolinensis
ENSRNOG00000017114	Synj2	98	87.188	ENSANAG00000026575	SYNJ2	98	86.207	Aotus_nancymaae
ENSRNOG00000017114	Synj2	97	86.602	ENSBTAG00000000817	SYNJ2	99	79.333	Bos_taurus
ENSRNOG00000017114	Synj2	100	84.113	ENSCJAG00000003570	SYNJ2	98	85.972	Callithrix_jacchus
ENSRNOG00000017114	Synj2	100	82.148	ENSCAFG00000000644	SYNJ2	99	80.913	Canis_familiaris
ENSRNOG00000017114	Synj2	97	87.709	ENSCAFG00020015809	SYNJ2	96	87.041	Canis_lupus_dingo
ENSRNOG00000017114	Synj2	97	86.077	ENSCHIG00000011077	SYNJ2	99	79.627	Capra_hircus
ENSRNOG00000017114	Synj2	100	85.170	ENSTSYG00000014342	SYNJ2	94	86.618	Carlito_syrichta
ENSRNOG00000017114	Synj2	97	86.538	ENSCAPG00000000287	SYNJ2	100	89.378	Cavia_aperea
ENSRNOG00000017114	Synj2	97	90.000	ENSCPOG00000009144	SYNJ2	100	89.378	Cavia_porcellus
ENSRNOG00000017114	Synj2	98	86.473	ENSCCAG00000025484	SYNJ2	98	85.815	Cebus_capucinus
ENSRNOG00000017114	Synj2	100	84.274	ENSCATG00000042943	SYNJ2	98	86.139	Cercocebus_atys
ENSRNOG00000017114	Synj2	100	85.146	ENSCLAG00000004730	SYNJ2	100	91.319	Chinchilla_lanigera
ENSRNOG00000017114	Synj2	100	83.126	ENSCSAG00000013130	SYNJ2	99	82.462	Chlorocebus_sabaeus
ENSRNOG00000017114	Synj2	51	96.396	ENSCHOG00000000343	-	51	96.396	Choloepus_hoffmanni
ENSRNOG00000017114	Synj2	96	74.937	ENSCPBG00000016273	SYNJ2	98	69.850	Chrysemys_picta_bellii
ENSRNOG00000017114	Synj2	100	84.939	ENSCANG00000040349	SYNJ2	98	86.521	Colobus_angolensis_palliatus
ENSRNOG00000017114	Synj2	98	93.913	ENSCGRG00001004257	Synj2	97	94.900	Cricetulus_griseus_chok1gshd
ENSRNOG00000017114	Synj2	98	93.913	ENSCGRG00000001656	Synj2	100	94.271	Cricetulus_griseus_crigri
ENSRNOG00000017114	Synj2	98	72.531	ENSDNOG00000015900	SYNJ2	100	77.461	Dasypus_novemcinctus
ENSRNOG00000017114	Synj2	97	87.380	ENSDORG00000014128	Synj2	98	80.554	Dipodomys_ordii
ENSRNOG00000017114	Synj2	82	88.928	ENSETEG00000017418	SYNJ2	81	88.928	Echinops_telfairi
ENSRNOG00000017114	Synj2	97	87.730	ENSEASG00005018902	SYNJ2	99	81.715	Equus_asinus_asinus
ENSRNOG00000017114	Synj2	100	82.218	ENSECAG00000012646	SYNJ2	93	81.715	Equus_caballus
ENSRNOG00000017114	Synj2	56	78.571	ENSEEUG00000015796	-	57	78.571	Erinaceus_europaeus
ENSRNOG00000017114	Synj2	97	87.204	ENSFCAG00000010854	SYNJ2	98	85.331	Felis_catus
ENSRNOG00000017114	Synj2	94	73.374	ENSFALG00000012593	SYNJ2	98	66.849	Ficedula_albicollis
ENSRNOG00000017114	Synj2	97	89.386	ENSFDAG00000016352	SYNJ2	100	88.601	Fukomys_damarensis
ENSRNOG00000017114	Synj2	97	73.733	ENSGALG00000013727	SYNJ2	90	72.449	Gallus_gallus
ENSRNOG00000017114	Synj2	96	74.207	ENSGAGG00000009857	SYNJ2	98	68.999	Gopherus_agassizii
ENSRNOG00000017114	Synj2	100	85.101	ENSGGOG00000012210	SYNJ2	98	86.609	Gorilla_gorilla
ENSRNOG00000017114	Synj2	100	85.007	ENSHGLG00000007534	SYNJ2	100	90.278	Heterocephalus_glaber_female
ENSRNOG00000017114	Synj2	97	89.912	ENSHGLG00100009973	SYNJ2	100	88.860	Heterocephalus_glaber_male
ENSRNOG00000017114	Synj2	100	84.472	ENSSTOG00000016474	SYNJ2	99	83.277	Ictidomys_tridecemlineatus
ENSRNOG00000017114	Synj2	97	87.807	ENSJJAG00000014436	Synj2	92	92.793	Jaculus_jaculus
ENSRNOG00000017114	Synj2	81	70.790	ENSLACG00000007316	SYNJ2	99	66.883	Latimeria_chalumnae
ENSRNOG00000017114	Synj2	97	85.890	ENSLAFG00000011979	SYNJ2	99	79.510	Loxodonta_africana
ENSRNOG00000017114	Synj2	93	88.906	ENSMFAG00000040552	SYNJ2	99	86.703	Macaca_fascicularis
ENSRNOG00000017114	Synj2	86	83.738	ENSMMUG00000007153	SYNJ2	100	84.319	Macaca_mulatta
ENSRNOG00000017114	Synj2	100	84.355	ENSMNEG00000017211	SYNJ2	98	86.218	Macaca_nemestrina
ENSRNOG00000017114	Synj2	100	79.945	ENSMLEG00000024911	SYNJ2	99	79.351	Mandrillus_leucophaeus
ENSRNOG00000017114	Synj2	97	74.142	ENSMGAG00000012839	SYNJ2	98	73.433	Meleagris_gallopavo
ENSRNOG00000017114	Synj2	99	91.993	ENSMAUG00000022212	Synj2	100	94.010	Mesocricetus_auratus
ENSRNOG00000017114	Synj2	97	85.640	ENSMICG00000015804	SYNJ2	98	83.856	Microcebus_murinus
ENSRNOG00000017114	Synj2	97	93.673	ENSMOCG00000020054	Synj2	100	93.229	Microtus_ochrogaster
ENSRNOG00000017114	Synj2	97	81.590	ENSMODG00000007783	SYNJ2	99	76.629	Monodelphis_domestica
ENSRNOG00000017114	Synj2	100	93.062	MGP_CAROLIEiJ_G0021026	Synj2	100	95.312	Mus_caroli
ENSRNOG00000017114	Synj2	100	92.922	ENSMUSG00000023805	Synj2	100	95.573	Mus_musculus
ENSRNOG00000017114	Synj2	100	92.852	MGP_PahariEiJ_G0023344	Synj2	100	95.052	Mus_pahari
ENSRNOG00000017114	Synj2	100	92.572	MGP_SPRETEiJ_G0021931	Synj2	100	94.535	Mus_spretus
ENSRNOG00000017114	Synj2	97	81.872	ENSMPUG00000005323	SYNJ2	98	82.348	Mustela_putorius_furo
ENSRNOG00000017114	Synj2	97	83.178	ENSMLUG00000000324	SYNJ2	99	79.748	Myotis_lucifugus
ENSRNOG00000017114	Synj2	97	91.937	ENSNGAG00000014859	Synj2	98	91.575	Nannospalax_galili
ENSRNOG00000017114	Synj2	100	82.053	ENSNLEG00000010750	SYNJ2	98	82.565	Nomascus_leucogenys
ENSRNOG00000017114	Synj2	95	81.297	ENSMEUG00000003493	SYNJ2	94	79.855	Notamacropus_eugenii
ENSRNOG00000017114	Synj2	93	77.182	ENSOPRG00000009648	SYNJ2	93	76.032	Ochotona_princeps
ENSRNOG00000017114	Synj2	97	90.789	ENSODEG00000007709	SYNJ2	100	89.896	Octodon_degus
ENSRNOG00000017114	Synj2	99	79.489	ENSOCUG00000004762	SYNJ2	99	78.601	Oryctolagus_cuniculus
ENSRNOG00000017114	Synj2	92	85.331	ENSOGAG00000000488	SYNJ2	100	84.497	Otolemur_garnettii
ENSRNOG00000017114	Synj2	97	82.982	ENSOARG00000004304	SYNJ2	99	77.626	Ovis_aries
ENSRNOG00000017114	Synj2	100	83.310	ENSPPAG00000028831	SYNJ2	99	82.119	Pan_paniscus
ENSRNOG00000017114	Synj2	100	84.013	ENSPPRG00000009068	SYNJ2	98	85.410	Panthera_pardus
ENSRNOG00000017114	Synj2	100	83.768	ENSPTIG00000018780	SYNJ2	99	81.156	Panthera_tigris_altaica
ENSRNOG00000017114	Synj2	97	88.522	ENSPTRG00000018739	SYNJ2	99	87.352	Pan_troglodytes
ENSRNOG00000017114	Synj2	97	87.619	ENSPANG00000010755	SYNJ2	98	86.218	Papio_anubis
ENSRNOG00000017114	Synj2	96	74.457	ENSPSIG00000014659	SYNJ2	98	69.314	Pelodiscus_sinensis
ENSRNOG00000017114	Synj2	100	89.074	ENSPEMG00000006247	Synj2	100	93.506	Peromyscus_maniculatus_bairdii
ENSRNOG00000017114	Synj2	97	84.174	ENSPCIG00000010179	SYNJ2	99	77.371	Phascolarctos_cinereus
ENSRNOG00000017114	Synj2	100	83.403	ENSPPYG00000017130	SYNJ2	99	82.174	Pongo_abelii
ENSRNOG00000017114	Synj2	85	93.548	ENSPCAG00000009217	SYNJ2	90	74.338	Procavia_capensis
ENSRNOG00000017114	Synj2	100	84.360	ENSPCOG00000026910	SYNJ2	98	85.266	Propithecus_coquereli
ENSRNOG00000017114	Synj2	100	78.576	ENSPVAG00000006131	SYNJ2	99	76.846	Pteropus_vampyrus
ENSRNOG00000017114	Synj2	100	82.998	ENSRBIG00000044126	SYNJ2	99	81.405	Rhinopithecus_bieti
ENSRNOG00000017114	Synj2	100	84.939	ENSRROG00000027755	SYNJ2	98	86.296	Rhinopithecus_roxellana
ENSRNOG00000017114	Synj2	100	83.871	ENSSBOG00000034876	SYNJ2	98	85.815	Saimiri_boliviensis_boliviensis
ENSRNOG00000017114	Synj2	97	81.506	ENSSHAG00000018881	SYNJ2	99	76.364	Sarcophilus_harrisii
ENSRNOG00000017114	Synj2	96	73.648	ENSSPUG00000000491	SYNJ2	95	69.695	Sphenodon_punctatus
ENSRNOG00000017114	Synj2	100	84.095	ENSSSCG00000012315	SYNJ2	98	85.410	Sus_scrofa
ENSRNOG00000017114	Synj2	95	73.162	ENSTGUG00000011082	SYNJ2	100	71.863	Taeniopygia_guttata
ENSRNOG00000017114	Synj2	83	76.797	ENSTBEG00000015827	SYNJ2	82	76.797	Tupaia_belangeri
ENSRNOG00000017114	Synj2	100	76.413	ENSTTRG00000009677	SYNJ2	99	75.782	Tursiops_truncatus
ENSRNOG00000017114	Synj2	54	74.036	ENSUAMG00000021958	-	97	74.326	Ursus_americanus
ENSRNOG00000017114	Synj2	82	84.362	ENSUMAG00000012826	SYNJ2	96	84.259	Ursus_maritimus
ENSRNOG00000017114	Synj2	81	86.903	ENSVVUG00000007407	SYNJ2	99	86.903	Vulpes_vulpes
ENSRNOG00000017114	Synj2	96	65.517	ENSXETG00000034066	synj2	79	78.788	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	21873635.	IBA	Function
GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	-	ISO	Function
GO:0004445	inositol-polyphosphate 5-phosphatase activity	9388224.	IDA	Function
GO:0005515	protein binding	10357812.	IPI	Function
GO:0005737	cytoplasm	10357812.11498538.	IDA	Component
GO:0005881	cytoplasmic microtubule	11498538.	IDA	Component
GO:0007420	brain development	21873635.	IBA	Process
GO:0007420	brain development	9931483.	IEP	Process
GO:0017124	SH3 domain binding	21873635.	IBA	Function
GO:0017124	SH3 domain binding	9388224.11498538.	IPI	Function
GO:0030165	PDZ domain binding	21873635.	IBA	Function
GO:0030165	PDZ domain binding	10357812.	IPI	Function
GO:0030165	PDZ domain binding	11498538.	IPI	Function
GO:0031315	extrinsic component of mitochondrial outer membrane	10357812.	IDA	Component
GO:0032587	ruffle membrane	11498538.	IDA	Component
GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	-	IEA	Function
GO:0043679	axon terminus	11498538.	IDA	Component
GO:0045121	membrane raft	-	IEA	Component
GO:0046855	inositol phosphate dephosphorylation	21873635.	IBA	Process
GO:0046855	inositol phosphate dephosphorylation	9388224.	IDA	Process
GO:0046856	phosphatidylinositol dephosphorylation	21873635.	IBA	Process
GO:0046856	phosphatidylinositol dephosphorylation	11498538.	IDA	Process
GO:0046856	phosphatidylinositol dephosphorylation	-	IEA	Process
GO:0048312	intracellular distribution of mitochondria	10357812.	IDA	Process
GO:0048471	perinuclear region of cytoplasm	21873635.	IBA	Component
GO:0048471	perinuclear region of cytoplasm	10357812.	IDA	Component
GO:0052744	phosphatidylinositol monophosphate phosphatase activity	11498538.	IDA	Function
GO:0098793	presynapse	21873635.	IBA	Component
GO:0098793	presynapse	11498538.	IDA	Component