EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000017117 (Gene tree)
Gene ID: 303250
Gene Symbol: Ybx2
Alias: LOC303250|RGD1305068
Full Name: Y box binding protein 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5154 bases
Position: chr10:56546710-56551863
Accession: 1305068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000023003	CSD	PF00313.22	7.9e-26	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000023003	-	1150	XM_220618	ENSRNOP00000023003	359 (aa)	XP_220618	D4A3P0

Gene Model

Click here to download ENSRNOG00000017117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000017117	Ybx2	84	89.610	ENSG00000006047	YBX2	99	86.503	Homo_sapiens
ENSRNOG00000017117	Ybx2	55	91.327	ENSAMEG00000016564	YBX2	87	91.146	Ailuropoda_melanoleuca
ENSRNOG00000017117	Ybx2	79	93.972	ENSANAG00000019540	YBX2	86	93.493	Aotus_nancymaae
ENSRNOG00000017117	Ybx2	100	96.667	ENSBTAG00000009126	YBX2	100	96.667	Bos_taurus
ENSRNOG00000017117	Ybx2	84	91.722	ENSCJAG00000016581	-	84	90.397	Callithrix_jacchus
ENSRNOG00000017117	Ybx2	76	90.146	ENSCJAG00000042146	-	97	90.146	Callithrix_jacchus
ENSRNOG00000017117	Ybx2	100	95.095	ENSCAFG00000016128	-	100	95.095	Canis_familiaris
ENSRNOG00000017117	Ybx2	70	77.559	ENSCAFG00000005162	-	90	77.559	Canis_familiaris
ENSRNOG00000017117	Ybx2	84	92.233	ENSCAFG00020008884	YBX2	84	92.233	Canis_lupus_dingo
ENSRNOG00000017117	Ybx2	86	96.429	ENSCHIG00000016407	YBX2	84	96.689	Capra_hircus
ENSRNOG00000017117	Ybx2	75	90.511	ENSTSYG00000030765	YBX2	92	90.511	Carlito_syrichta
ENSRNOG00000017117	Ybx2	74	96.255	ENSCAPG00000011432	YBX2	100	96.255	Cavia_aperea
ENSRNOG00000017117	Ybx2	84	96.026	ENSCPOG00000009543	YBX2	96	95.926	Cavia_porcellus
ENSRNOG00000017117	Ybx2	84	95.033	ENSCCAG00000025671	YBX2	89	94.304	Cebus_capucinus
ENSRNOG00000017117	Ybx2	84	94.040	ENSCATG00000036919	YBX2	84	94.040	Cercocebus_atys
ENSRNOG00000017117	Ybx2	75	96.667	ENSCLAG00000010306	YBX2	96	96.667	Chinchilla_lanigera
ENSRNOG00000017117	Ybx2	84	94.040	ENSCSAG00000011857	YBX2	84	94.040	Chlorocebus_sabaeus
ENSRNOG00000017117	Ybx2	71	70.656	ENSCPBG00000022288	YBX2	81	72.481	Chrysemys_picta_bellii
ENSRNOG00000017117	Ybx2	75	92.910	ENSCANG00000007129	YBX2	97	92.910	Colobus_angolensis_palliatus
ENSRNOG00000017117	Ybx2	100	98.886	ENSCGRG00001000751	Ybx2	100	98.886	Cricetulus_griseus_chok1gshd
ENSRNOG00000017117	Ybx2	75	98.148	ENSCGRG00000007683	Ybx2	99	98.148	Cricetulus_griseus_crigri
ENSRNOG00000017117	Ybx2	75	94.815	ENSDNOG00000013746	YBX2	97	84.333	Dasypus_novemcinctus
ENSRNOG00000017117	Ybx2	75	97.015	ENSDORG00000010882	Ybx2	95	97.015	Dipodomys_ordii
ENSRNOG00000017117	Ybx2	83	91.611	ENSEASG00005018928	YBX2	83	91.497	Equus_asinus_asinus
ENSRNOG00000017117	Ybx2	85	89.902	ENSECAG00000009996	YBX2	79	89.769	Equus_caballus
ENSRNOG00000017117	Ybx2	83	96.970	ENSFCAG00000018097	YBX2	85	96.358	Felis_catus
ENSRNOG00000017117	Ybx2	69	69.478	ENSGAGG00000016159	YBX2	91	73.004	Gopherus_agassizii
ENSRNOG00000017117	Ybx2	90	92.284	ENSGGOG00000007399	YBX2	84	91.722	Gorilla_gorilla
ENSRNOG00000017117	Ybx2	84	94.040	ENSHGLG00000014186	YBX2	84	94.040	Heterocephalus_glaber_female
ENSRNOG00000017117	Ybx2	75	97.407	ENSSTOG00000008630	YBX2	99	97.407	Ictidomys_tridecemlineatus
ENSRNOG00000017117	Ybx2	75	98.513	ENSJJAG00000013072	Ybx2	95	98.513	Jaculus_jaculus
ENSRNOG00000017117	Ybx2	100	97.222	ENSLAFG00000014006	YBX2	100	97.222	Loxodonta_africana
ENSRNOG00000017117	Ybx2	84	94.040	ENSMFAG00000039921	YBX2	84	94.040	Macaca_fascicularis
ENSRNOG00000017117	Ybx2	84	94.040	ENSMNEG00000045221	YBX2	84	94.040	Macaca_nemestrina
ENSRNOG00000017117	Ybx2	77	74.460	ENSMLEG00000029266	-	84	74.460	Mandrillus_leucophaeus
ENSRNOG00000017117	Ybx2	87	84.395	ENSMLEG00000039452	YBX2	97	94.030	Mandrillus_leucophaeus
ENSRNOG00000017117	Ybx2	100	98.886	ENSMAUG00000022062	Ybx2	100	98.886	Mesocricetus_auratus
ENSRNOG00000017117	Ybx2	100	95.556	ENSMICG00000012453	YBX2	100	95.556	Microcebus_murinus
ENSRNOG00000017117	Ybx2	100	98.886	ENSMOCG00000013958	Ybx2	100	98.886	Microtus_ochrogaster
ENSRNOG00000017117	Ybx2	77	77.370	ENSMODG00000017596	YBX2	81	88.255	Monodelphis_domestica
ENSRNOG00000017117	Ybx2	100	99.443	MGP_CAROLIEiJ_G0016606	Ybx2	100	99.443	Mus_caroli
ENSRNOG00000017117	Ybx2	100	99.443	ENSMUSG00000018554	Ybx2	100	99.443	Mus_musculus
ENSRNOG00000017117	Ybx2	100	99.443	MGP_PahariEiJ_G0017737	Ybx2	100	99.443	Mus_pahari
ENSRNOG00000017117	Ybx2	100	99.443	MGP_SPRETEiJ_G0017442	Ybx2	100	99.443	Mus_spretus
ENSRNOG00000017117	Ybx2	69	91.463	ENSMPUG00000010386	YBX2	93	91.463	Mustela_putorius_furo
ENSRNOG00000017117	Ybx2	93	86.269	ENSMLUG00000004686	YBX2	90	89.073	Myotis_lucifugus
ENSRNOG00000017117	Ybx2	100	95.543	ENSNGAG00000011707	Ybx2	100	95.543	Nannospalax_galili
ENSRNOG00000017117	Ybx2	84	94.000	ENSNLEG00000008063	-	100	92.667	Nomascus_leucogenys
ENSRNOG00000017117	Ybx2	77	88.087	ENSMEUG00000006947	YBX2	90	86.424	Notamacropus_eugenii
ENSRNOG00000017117	Ybx2	81	90.657	ENSOPRG00000013773	YBX2	99	90.311	Ochotona_princeps
ENSRNOG00000017117	Ybx2	84	94.371	ENSODEG00000017530	YBX2	96	95.185	Octodon_degus
ENSRNOG00000017117	Ybx2	87	85.256	ENSOCUG00000015064	YBX2	95	86.913	Oryctolagus_cuniculus
ENSRNOG00000017117	Ybx2	75	96.642	ENSOGAG00000004392	YBX2	100	96.642	Otolemur_garnettii
ENSRNOG00000017117	Ybx2	77	95.668	ENSOARG00000011562	YBX2	78	95.668	Ovis_aries
ENSRNOG00000017117	Ybx2	82	89.701	ENSPPAG00000041892	YBX2	100	89.701	Pan_paniscus
ENSRNOG00000017117	Ybx2	100	96.111	ENSPPRG00000000782	YBX2	100	96.111	Panthera_pardus
ENSRNOG00000017117	Ybx2	87	80.449	ENSPTRG00000051288	-	85	90.602	Pan_troglodytes
ENSRNOG00000017117	Ybx2	84	90.260	ENSPTRG00000008673	YBX2	89	96.753	Pan_troglodytes
ENSRNOG00000017117	Ybx2	83	93.980	ENSPANG00000024250	YBX2	84	93.980	Papio_anubis
ENSRNOG00000017117	Ybx2	77	71.119	ENSPANG00000032747	-	74	67.230	Papio_anubis
ENSRNOG00000017117	Ybx2	74	71.014	ENSPSIG00000012364	YBX2	99	74.638	Pelodiscus_sinensis
ENSRNOG00000017117	Ybx2	77	83.032	ENSPCIG00000028819	YBX2	85	90.795	Phascolarctos_cinereus
ENSRNOG00000017117	Ybx2	85	94.444	ENSPCAG00000008019	YBX2	84	94.702	Procavia_capensis
ENSRNOG00000017117	Ybx2	84	95.000	ENSPCOG00000006030	YBX2	84	94.702	Propithecus_coquereli
ENSRNOG00000017117	Ybx2	100	86.981	ENSPVAG00000005050	YBX2	100	86.981	Pteropus_vampyrus
ENSRNOG00000017117	Ybx2	84	93.709	ENSRBIG00000040919	YBX2	85	93.709	Rhinopithecus_bieti
ENSRNOG00000017117	Ybx2	81	82.492	ENSRROG00000041728	YBX2	99	82.492	Rhinopithecus_roxellana
ENSRNOG00000017117	Ybx2	84	87.333	ENSSBOG00000029566	YBX2	97	94.403	Saimiri_boliviensis_boliviensis
ENSRNOG00000017117	Ybx2	77	87.143	ENSSHAG00000007786	YBX2	95	85.667	Sarcophilus_harrisii
ENSRNOG00000017117	Ybx2	86	96.753	ENSSARG00000000488	YBX2	84	96.689	Sorex_araneus
ENSRNOG00000017117	Ybx2	74	68.148	ENSSPUG00000018250	YBX2	93	71.587	Sphenodon_punctatus
ENSRNOG00000017117	Ybx2	100	96.944	ENSSSCG00000017938	YBX2	100	96.944	Sus_scrofa
ENSRNOG00000017117	Ybx2	84	93.333	ENSTBEG00000001266	YBX2	89	93.333	Tupaia_belangeri
ENSRNOG00000017117	Ybx2	72	95.484	ENSTTRG00000009780	YBX2	72	95.484	Tursiops_truncatus
ENSRNOG00000017117	Ybx2	72	90.977	ENSUAMG00000014725	YBX2	100	90.977	Ursus_americanus
ENSRNOG00000017117	Ybx2	69	89.286	ENSUMAG00000015222	YBX2	90	89.286	Ursus_maritimus
ENSRNOG00000017117	Ybx2	69	78.049	ENSVPAG00000003104	-	100	78.049	Vicugna_pacos
ENSRNOG00000017117	Ybx2	70	84.646	ENSVVUG00000012111	-	78	84.646	Vulpes_vulpes
ENSRNOG00000017117	Ybx2	73	90.299	ENSVVUG00000027830	-	100	90.299	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	IEA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003729	mRNA binding	-	ISO	Function
GO:0003730	mRNA 3'-UTR binding	-	ISO	Function
GO:0005737	cytoplasm	16150897.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005844	polysome	-	ISO	Component
GO:0007286	spermatid development	-	ISO	Process
GO:0008289	lipid binding	-	ISO	Function
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0043021	ribonucleoprotein complex binding	-	ISO	Function
GO:0045182	translation regulator activity	-	ISO	Function
GO:0048255	mRNA stabilization	-	ISO	Process
GO:0048477	oogenesis	-	ISO	Process
GO:0048599	oocyte development	16150897.	IEP	Process
GO:0051100	negative regulation of binding	-	ISO	Process
GO:0120162	positive regulation of cold-induced thermogenesis	-	ISO	Process
GO:0120162	positive regulation of cold-induced thermogenesis	28970281.	ISS	Process
GO:1990904	ribonucleoprotein complex	-	ISO	Component