EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000017284 (Gene tree)
Gene ID: 306768
Gene Symbol: Nop16
Alias: LOC306768|RGD1305727
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5054 bases
Position: chr17:10559680-10564733
Accession: 1305727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000023320	Nop16	PF09420.10	3.4e-23	1	2
ENSRNOP00000023320	Nop16	PF09420.10	3.4e-23	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000023320	-	1202	-	ENSRNOP00000023320	178 (aa)	-	Q1RP77

Gene Model

Click here to download ENSRNOG00000017284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000017284	Nop16	96	51.765	ENSAPOG00000010682	-	96	51.765	Acanthochromis_polyacanthus
ENSRNOG00000017284	Nop16	100	92.697	ENSAMEG00000006988	-	100	92.697	Ailuropoda_melanoleuca
ENSRNOG00000017284	Nop16	96	52.941	ENSACIG00000019263	nop16	95	52.941	Amphilophus_citrinellus
ENSRNOG00000017284	Nop16	98	51.429	ENSAOCG00000005504	nop16	96	52.353	Amphiprion_ocellaris
ENSRNOG00000017284	Nop16	98	51.429	ENSAPEG00000006605	nop16	96	52.353	Amphiprion_percula
ENSRNOG00000017284	Nop16	96	54.118	ENSATEG00000014089	nop16	95	54.118	Anabas_testudineus
ENSRNOG00000017284	Nop16	99	68.750	ENSACAG00000006333	-	99	68.750	Anolis_carolinensis
ENSRNOG00000017284	Nop16	100	88.202	ENSANAG00000015743	-	100	88.202	Aotus_nancymaae
ENSRNOG00000017284	Nop16	100	82.584	ENSANAG00000027410	-	100	82.584	Aotus_nancymaae
ENSRNOG00000017284	Nop16	96	55.294	ENSACLG00000025227	nop16	95	55.294	Astatotilapia_calliptera
ENSRNOG00000017284	Nop16	94	44.910	ENSAMXG00000006843	nop16	95	44.910	Astyanax_mexicanus
ENSRNOG00000017284	Nop16	100	91.573	ENSBTAG00000010734	NOP16	100	91.573	Bos_taurus
ENSRNOG00000017284	Nop16	66	32.374	WBGene00013958	ZK265.6	80	30.625	Caenorhabditis_elegans
ENSRNOG00000017284	Nop16	100	92.135	ENSCAFG00000016694	NOP16	100	92.135	Canis_familiaris
ENSRNOG00000017284	Nop16	99	92.614	ENSCAFG00020011505	-	94	92.614	Canis_lupus_dingo
ENSRNOG00000017284	Nop16	100	91.573	ENSCHIG00000022082	-	100	91.573	Capra_hircus
ENSRNOG00000017284	Nop16	100	74.157	ENSTSYG00000032690	-	100	74.157	Carlito_syrichta
ENSRNOG00000017284	Nop16	99	90.960	ENSTSYG00000030409	-	99	90.960	Carlito_syrichta
ENSRNOG00000017284	Nop16	100	91.011	ENSCPOG00000026072	-	100	91.011	Cavia_porcellus
ENSRNOG00000017284	Nop16	96	85.294	ENSCCAG00000026775	-	98	85.294	Cebus_capucinus
ENSRNOG00000017284	Nop16	100	89.326	ENSCLAG00000015405	-	100	89.326	Chinchilla_lanigera
ENSRNOG00000017284	Nop16	100	92.135	ENSCSAG00000009400	-	100	92.135	Chlorocebus_sabaeus
ENSRNOG00000017284	Nop16	99	75.281	ENSCPBG00000022647	-	99	75.281	Chrysemys_picta_bellii
ENSRNOG00000017284	Nop16	100	44.505	ENSCING00000006179	-	98	44.505	Ciona_intestinalis
ENSRNOG00000017284	Nop16	88	42.405	ENSCSAVG00000000269	-	87	42.405	Ciona_savignyi
ENSRNOG00000017284	Nop16	100	94.382	ENSCGRG00001004259	Nop16	100	94.382	Cricetulus_griseus_chok1gshd
ENSRNOG00000017284	Nop16	100	94.382	ENSCGRG00000010975	Nop16	100	94.382	Cricetulus_griseus_crigri
ENSRNOG00000017284	Nop16	96	50.000	ENSCSEG00000020523	nop16	97	50.000	Cynoglossus_semilaevis
ENSRNOG00000017284	Nop16	96	52.353	ENSCVAG00000020140	nop16	95	52.353	Cyprinodon_variegatus
ENSRNOG00000017284	Nop16	98	49.153	ENSDARG00000044402	nop16	99	49.153	Danio_rerio
ENSRNOG00000017284	Nop16	100	90.449	ENSDNOG00000042890	-	100	90.449	Dasypus_novemcinctus
ENSRNOG00000017284	Nop16	100	89.888	ENSDORG00000008872	Nop16	100	89.888	Dipodomys_ordii
ENSRNOG00000017284	Nop16	94	30.570	FBgn0039868	CG11563	88	32.275	Drosophila_melanogaster
ENSRNOG00000017284	Nop16	93	44.886	ENSEBUG00000011196	nop16	95	44.886	Eptatretus_burgeri
ENSRNOG00000017284	Nop16	100	93.820	ENSEASG00005011988	-	100	93.820	Equus_asinus_asinus
ENSRNOG00000017284	Nop16	100	93.820	ENSECAG00000021354	NOP16	100	93.820	Equus_caballus
ENSRNOG00000017284	Nop16	98	54.857	ENSELUG00000000401	nop16	98	54.857	Esox_lucius
ENSRNOG00000017284	Nop16	100	92.135	ENSFCAG00000025473	-	100	92.135	Felis_catus
ENSRNOG00000017284	Nop16	99	68.156	ENSFALG00000008553	-	99	68.156	Ficedula_albicollis
ENSRNOG00000017284	Nop16	100	89.888	ENSFDAG00000000193	-	100	89.888	Fukomys_damarensis
ENSRNOG00000017284	Nop16	96	53.529	ENSFHEG00000016452	nop16	95	53.529	Fundulus_heteroclitus
ENSRNOG00000017284	Nop16	99	74.302	ENSGALG00000003355	-	99	74.302	Gallus_gallus
ENSRNOG00000017284	Nop16	83	53.741	ENSGAFG00000011616	nop16	79	53.741	Gambusia_affinis
ENSRNOG00000017284	Nop16	95	50.296	ENSGACG00000020819	-	99	50.296	Gasterosteus_aculeatus
ENSRNOG00000017284	Nop16	96	47.647	ENSGACG00000020810	nop16	100	47.647	Gasterosteus_aculeatus
ENSRNOG00000017284	Nop16	96	51.765	ENSGACG00000002618	-	98	51.765	Gasterosteus_aculeatus
ENSRNOG00000017284	Nop16	96	50.581	ENSGACG00000003122	-	97	53.043	Gasterosteus_aculeatus
ENSRNOG00000017284	Nop16	96	54.706	ENSHBUG00000013527	nop16	95	54.706	Haplochromis_burtoni
ENSRNOG00000017284	Nop16	100	91.011	ENSHGLG00000013437	NOP16	100	91.011	Heterocephalus_glaber_female
ENSRNOG00000017284	Nop16	100	91.011	ENSHGLG00100011375	NOP16	100	91.011	Heterocephalus_glaber_male
ENSRNOG00000017284	Nop16	96	51.744	ENSHCOG00000019999	nop16	97	51.176	Hippocampus_comes
ENSRNOG00000017284	Nop16	94	49.102	ENSIPUG00000006682	nop16	95	49.102	Ictalurus_punctatus
ENSRNOG00000017284	Nop16	100	90.556	ENSSTOG00000004869	-	100	90.556	Ictidomys_tridecemlineatus
ENSRNOG00000017284	Nop16	100	93.820	ENSJJAG00000017655	Nop16	100	93.820	Jaculus_jaculus
ENSRNOG00000017284	Nop16	96	55.294	ENSKMAG00000006164	nop16	95	55.294	Kryptolebias_marmoratus
ENSRNOG00000017284	Nop16	96	52.353	ENSLBEG00000018355	nop16	78	52.353	Labrus_bergylta
ENSRNOG00000017284	Nop16	99	63.277	ENSLACG00000014884	nop16	100	63.277	Latimeria_chalumnae
ENSRNOG00000017284	Nop16	99	54.237	ENSLOCG00000012348	nop16	98	54.237	Lepisosteus_oculatus
ENSRNOG00000017284	Nop16	100	90.449	ENSLAFG00000017886	-	100	90.449	Loxodonta_africana
ENSRNOG00000017284	Nop16	97	54.651	ENSMAMG00000021868	nop16	97	54.651	Mastacembelus_armatus
ENSRNOG00000017284	Nop16	96	55.294	ENSMZEG00005012112	nop16	95	55.294	Maylandia_zebra
ENSRNOG00000017284	Nop16	57	71.287	ENSMGAG00000004726	-	99	71.287	Meleagris_gallopavo
ENSRNOG00000017284	Nop16	94	86.905	ENSMAUG00000015569	-	99	86.905	Mesocricetus_auratus
ENSRNOG00000017284	Nop16	60	94.340	ENSMAUG00000009852	-	100	94.340	Mesocricetus_auratus
ENSRNOG00000017284	Nop16	100	97.191	ENSMOCG00000020788	Nop16	100	97.191	Microtus_ochrogaster
ENSRNOG00000017284	Nop16	96	52.353	ENSMMOG00000016054	nop16	99	52.353	Mola_mola
ENSRNOG00000017284	Nop16	100	78.889	ENSMODG00000005214	-	100	78.889	Monodelphis_domestica
ENSRNOG00000017284	Nop16	96	50.000	ENSMALG00000021263	nop16	95	50.000	Monopterus_albus
ENSRNOG00000017284	Nop16	100	95.506	MGP_CAROLIEiJ_G0018538	Nop16	100	95.506	Mus_caroli
ENSRNOG00000017284	Nop16	100	96.067	ENSMUSG00000025869	Nop16	100	96.067	Mus_musculus
ENSRNOG00000017284	Nop16	100	96.067	MGP_PahariEiJ_G0019603	Nop16	100	96.067	Mus_pahari
ENSRNOG00000017284	Nop16	100	95.506	MGP_SPRETEiJ_G0019418	Nop16	100	95.506	Mus_spretus
ENSRNOG00000017284	Nop16	100	93.258	ENSMPUG00000012552	-	100	93.258	Mustela_putorius_furo
ENSRNOG00000017284	Nop16	100	91.011	ENSMPUG00000016964	-	100	91.011	Mustela_putorius_furo
ENSRNOG00000017284	Nop16	99	89.831	ENSMLUG00000003504	-	99	89.831	Myotis_lucifugus
ENSRNOG00000017284	Nop16	100	93.258	ENSNGAG00000018045	Nop16	100	93.258	Nannospalax_galili
ENSRNOG00000017284	Nop16	96	54.118	ENSNBRG00000015181	nop16	96	54.118	Neolamprologus_brichardi
ENSRNOG00000017284	Nop16	100	91.573	ENSODEG00000009586	-	100	91.573	Octodon_degus
ENSRNOG00000017284	Nop16	96	57.059	ENSONIG00000016417	nop16	95	57.059	Oreochromis_niloticus
ENSRNOG00000017284	Nop16	100	90.449	ENSOCUG00000013171	-	100	90.449	Oryctolagus_cuniculus
ENSRNOG00000017284	Nop16	96	54.118	ENSORLG00000026611	nop16	95	54.118	Oryzias_latipes
ENSRNOG00000017284	Nop16	96	57.059	ENSOMEG00000023001	nop16	95	57.059	Oryzias_melastigma
ENSRNOG00000017284	Nop16	100	92.697	ENSOGAG00000000824	-	100	92.697	Otolemur_garnettii
ENSRNOG00000017284	Nop16	100	91.573	ENSOARG00000002165	-	100	91.573	Ovis_aries
ENSRNOG00000017284	Nop16	100	91.011	ENSPPAG00000035473	-	100	91.011	Pan_paniscus
ENSRNOG00000017284	Nop16	100	92.135	ENSPPRG00000016600	-	100	92.135	Panthera_pardus
ENSRNOG00000017284	Nop16	100	91.573	ENSPTIG00000011708	-	100	91.573	Panthera_tigris_altaica
ENSRNOG00000017284	Nop16	100	91.011	ENSPTRG00000017560	NOP16	100	91.011	Pan_troglodytes
ENSRNOG00000017284	Nop16	99	52.542	ENSPKIG00000009587	nop16	99	52.542	Paramormyrops_kingsleyae
ENSRNOG00000017284	Nop16	79	67.606	ENSPSIG00000013546	-	99	67.606	Pelodiscus_sinensis
ENSRNOG00000017284	Nop16	95	54.386	ENSPMGG00000003443	nop16	99	54.386	Periophthalmus_magnuspinnatus
ENSRNOG00000017284	Nop16	100	95.506	ENSPEMG00000020268	Nop16	100	95.506	Peromyscus_maniculatus_bairdii
ENSRNOG00000017284	Nop16	100	81.667	ENSPCIG00000009782	-	100	81.667	Phascolarctos_cinereus
ENSRNOG00000017284	Nop16	96	52.353	ENSPFOG00000010549	nop16	95	52.353	Poecilia_formosa
ENSRNOG00000017284	Nop16	77	51.825	ENSPLAG00000007124	nop16	70	51.825	Poecilia_latipinna
ENSRNOG00000017284	Nop16	96	52.353	ENSPMEG00000008611	nop16	95	52.353	Poecilia_mexicana
ENSRNOG00000017284	Nop16	96	52.353	ENSPREG00000012940	nop16	95	52.353	Poecilia_reticulata
ENSRNOG00000017284	Nop16	99	92.090	ENSPPYG00000016070	-	99	92.090	Pongo_abelii
ENSRNOG00000017284	Nop16	96	55.294	ENSPNYG00000013529	nop16	95	55.294	Pundamilia_nyererei
ENSRNOG00000017284	Nop16	93	47.929	ENSPNAG00000016233	nop16	95	47.929	Pygocentrus_nattereri
ENSRNOG00000017284	Nop16	100	80.447	ENSSHAG00000001724	-	100	80.447	Sarcophilus_harrisii
ENSRNOG00000017284	Nop16	90	51.875	ENSSFOG00015010537	nop16	77	51.163	Scleropages_formosus
ENSRNOG00000017284	Nop16	96	52.941	ENSSDUG00000022349	nop16	95	52.941	Seriola_dumerili
ENSRNOG00000017284	Nop16	96	53.529	ENSSLDG00000025171	nop16	95	53.529	Seriola_lalandi_dorsalis
ENSRNOG00000017284	Nop16	73	78.462	ENSSARG00000006699	-	61	78.462	Sorex_araneus
ENSRNOG00000017284	Nop16	99	72.159	ENSSPUG00000006508	-	98	72.159	Sphenodon_punctatus
ENSRNOG00000017284	Nop16	96	54.706	ENSSPAG00000011772	nop16	95	54.706	Stegastes_partitus
ENSRNOG00000017284	Nop16	100	91.573	ENSSSCG00000029577	-	100	91.573	Sus_scrofa
ENSRNOG00000017284	Nop16	99	72.626	ENSTGUG00000000543	-	99	72.626	Taeniopygia_guttata
ENSRNOG00000017284	Nop16	96	53.801	ENSTRUG00000020255	nop16	95	53.801	Takifugu_rubripes
ENSRNOG00000017284	Nop16	96	53.801	ENSTNIG00000007616	nop16	95	53.801	Tetraodon_nigroviridis
ENSRNOG00000017284	Nop16	100	92.135	ENSUAMG00000005139	-	100	92.135	Ursus_americanus
ENSRNOG00000017284	Nop16	99	93.182	ENSVVUG00000001697	-	94	93.182	Vulpes_vulpes
ENSRNOG00000017284	Nop16	92	58.282	ENSXETG00000022342	nop16	95	58.282	Xenopus_tropicalis
ENSRNOG00000017284	Nop16	96	53.801	ENSXCOG00000018829	nop16	97	53.801	Xiphophorus_couchianus
ENSRNOG00000017284	Nop16	96	54.386	ENSXMAG00000029113	nop16	95	54.386	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0042273	ribosomal large subunit biogenesis	21873635.	IBA	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component