EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000017294 (Gene tree)
Gene ID
100360606
Gene Symbol
Zranb1
Alias
LOC100359837|LOC100360606|LOC293571
Full Name
zinc finger RANBP2-type containing 1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
38846 bases
Position
chr1:204959174-204998019
Accession
2321751
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000023257zf-RanBPPF00641.187e-1012
ENSRNOP00000023257zf-RanBPPF00641.187e-1022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000023257-2526XM_002728842ENSRNOP00000023257734 (aa)XP_002728888D4A3I0
Gene Model
Click here to download ENSRNOG00000017294's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017294's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000017294Zranb19699.294ENSG00000019995ZRANB110099.294Homo_sapiens
ENSRNOG00000017294Zranb19585.775ENSAPOG00000005337zranb1a9985.735Acanthochromis_polyacanthus
ENSRNOG00000017294Zranb19581.421ENSAPOG00000001420ZRANB19982.425Acanthochromis_polyacanthus
ENSRNOG00000017294Zranb19699.011ENSAMEG00000004155ZRANB110099.011Ailuropoda_melanoleuca
ENSRNOG00000017294Zranb19577.389ENSACIG00000005436zranb1b9878.408Amphilophus_citrinellus
ENSRNOG00000017294Zranb19586.080ENSAOCG00000001834zranb1a9986.040Amphiprion_ocellaris
ENSRNOG00000017294Zranb19582.033ENSAOCG00000004465zranb1b9882.033Amphiprion_ocellaris
ENSRNOG00000017294Zranb19585.237ENSAPEG00000007138zranb1b9885.237Amphiprion_percula
ENSRNOG00000017294Zranb19585.613ENSATEG00000001032zranb1a9985.633Anabas_testudineus
ENSRNOG00000017294Zranb19584.497ENSATEG00000007705zranb1b9884.497Anabas_testudineus
ENSRNOG00000017294Zranb19696.203ENSAPLG00000014747ZRANB110096.203Anas_platyrhynchos
ENSRNOG00000017294Zranb19696.328ENSACAG00000014485ZRANB110096.328Anolis_carolinensis
ENSRNOG00000017294Zranb19998.069ENSANAG00000028845ZRANB19998.069Aotus_nancymaae
ENSRNOG00000017294Zranb19585.795ENSACLG00000003903zranb1a9985.755Astatotilapia_calliptera
ENSRNOG00000017294Zranb19583.473ENSACLG00000017385ZRANB19883.567Astatotilapia_calliptera
ENSRNOG00000017294Zranb19578.711ENSAMXG00000008009zranb1b9878.652Astyanax_mexicanus
ENSRNOG00000017294Zranb19999.044ENSBTAG00000003395ZRANB110099.153Bos_taurus
ENSRNOG00000017294Zranb110098.365ENSCJAG00000012573ZRANB110098.365Callithrix_jacchus
ENSRNOG00000017294Zranb110098.501ENSCAFG00000012768ZRANB110098.501Canis_familiaris
ENSRNOG00000017294Zranb110098.501ENSCAFG00020015397ZRANB110098.501Canis_lupus_dingo
ENSRNOG00000017294Zranb110098.910ENSCHIG00000023041ZRANB110098.910Capra_hircus
ENSRNOG00000017294Zranb19798.738ENSTSYG00000000123ZRANB110098.738Carlito_syrichta
ENSRNOG00000017294Zranb19698.729ENSCPOG00000008391ZRANB110098.729Cavia_porcellus
ENSRNOG00000017294Zranb17098.450ENSCCAG00000022748ZRANB19998.450Cebus_capucinus
ENSRNOG00000017294Zranb110098.774ENSCATG00000035796ZRANB110099.294Cercocebus_atys
ENSRNOG00000017294Zranb110098.501ENSCLAG00000003775ZRANB110099.153Chinchilla_lanigera
ENSRNOG00000017294Zranb110098.774ENSCSAG00000004507ZRANB110098.774Chlorocebus_sabaeus
ENSRNOG00000017294Zranb19696.751ENSCPBG00000028065ZRANB110096.751Chrysemys_picta_bellii
ENSRNOG00000017294Zranb19643.817ENSCING00000013158-9844.307Ciona_intestinalis
ENSRNOG00000017294Zranb110098.501ENSCANG00000041458ZRANB110098.501Colobus_angolensis_palliatus
ENSRNOG00000017294Zranb110099.591ENSCGRG00001024189Zranb110099.591Cricetulus_griseus_chok1gshd
ENSRNOG00000017294Zranb110099.591ENSCGRG00000005680Zranb110099.591Cricetulus_griseus_crigri
ENSRNOG00000017294Zranb19583.357ENSCSEG00000010830zranb1a9983.310Cynoglossus_semilaevis
ENSRNOG00000017294Zranb19585.390ENSCSEG00000015297ZRANB19884.232Cynoglossus_semilaevis
ENSRNOG00000017294Zranb19583.916ENSCVAG00000019593zranb1b9883.916Cyprinodon_variegatus
ENSRNOG00000017294Zranb19578.164ENSDARG00000063190zranb1b9878.522Danio_rerio
ENSRNOG00000017294Zranb19577.496ENSDARG00000060257zranb1a9777.877Danio_rerio
ENSRNOG00000017294Zranb110097.275ENSDNOG00000044807ZRANB110097.275Dasypus_novemcinctus
ENSRNOG00000017294Zranb19698.729ENSDORG00000010679Zranb110098.729Dipodomys_ordii
ENSRNOG00000017294Zranb19542.313FBgn0037734trbd9643.497Drosophila_melanogaster
ENSRNOG00000017294Zranb19696.893ENSETEG00000018124ZRANB110096.893Echinops_telfairi
ENSRNOG00000017294Zranb19565.581ENSEBUG00000003475zranb1b9965.581Eptatretus_burgeri
ENSRNOG00000017294Zranb110098.910ENSEASG00005013996ZRANB110099.153Equus_asinus_asinus
ENSRNOG00000017294Zranb110099.046ENSECAG00000017587ZRANB110099.046Equus_caballus
ENSRNOG00000017294Zranb19579.011ENSELUG00000015155ZRANB19879.357Esox_lucius
ENSRNOG00000017294Zranb110097.956ENSFCAG00000002438ZRANB110098.305Felis_catus
ENSRNOG00000017294Zranb19696.751ENSFALG00000004837ZRANB110096.751Ficedula_albicollis
ENSRNOG00000017294Zranb19699.294ENSFDAG00000006136ZRANB110099.294Fukomys_damarensis
ENSRNOG00000017294Zranb19572.535ENSFHEG00000011656ZRANB19972.676Fundulus_heteroclitus
ENSRNOG00000017294Zranb19580.676ENSFHEG00000021079zranb1b9980.863Fundulus_heteroclitus
ENSRNOG00000017294Zranb19581.731ENSGMOG00000018270zranb1b9882.877Gadus_morhua
ENSRNOG00000017294Zranb19696.751ENSGALG00000031474ZRANB110096.751Gallus_gallus
ENSRNOG00000017294Zranb19582.143ENSGAFG00000011850zranb1b9983.379Gambusia_affinis
ENSRNOG00000017294Zranb19583.128ENSGACG00000009658zranb1b9983.265Gasterosteus_aculeatus
ENSRNOG00000017294Zranb19684.292ENSGACG00000002597ZRANB19884.703Gasterosteus_aculeatus
ENSRNOG00000017294Zranb19596.126ENSGAGG00000024980ZRANB19896.126Gopherus_agassizii
ENSRNOG00000017294Zranb110098.774ENSGGOG00000016848ZRANB110098.774Gorilla_gorilla
ENSRNOG00000017294Zranb19585.938ENSHBUG00000019365zranb1a9985.897Haplochromis_burtoni
ENSRNOG00000017294Zranb19583.613ENSHBUG00000017048ZRANB19883.708Haplochromis_burtoni
ENSRNOG00000017294Zranb19699.294ENSHGLG00000013127ZRANB110099.294Heterocephalus_glaber_female
ENSRNOG00000017294Zranb19696.610ENSHGLG00100007253ZRANB110096.610Heterocephalus_glaber_male
ENSRNOG00000017294Zranb19583.192ENSHCOG00000016466ZRANB19883.192Hippocampus_comes
ENSRNOG00000017294Zranb19579.549ENSHCOG00000016378zranb1a9980.000Hippocampus_comes
ENSRNOG00000017294Zranb19578.481ENSIPUG00000000984zranb1b9878.561Ictalurus_punctatus
ENSRNOG00000017294Zranb19699.013ENSSTOG00000014180ZRANB110099.013Ictidomys_tridecemlineatus
ENSRNOG00000017294Zranb19698.870ENSJJAG00000009904Zranb110098.870Jaculus_jaculus
ENSRNOG00000017294Zranb19684.473ENSKMAG00000013496ZRANB19984.429Kryptolebias_marmoratus
ENSRNOG00000017294Zranb19483.616ENSKMAG00000020697zranb1b9983.898Kryptolebias_marmoratus
ENSRNOG00000017294Zranb19581.844ENSLBEG00000025466zranb1a9981.792Labrus_bergylta
ENSRNOG00000017294Zranb19583.934ENSLBEG00000022522zranb1b9883.934Labrus_bergylta
ENSRNOG00000017294Zranb19594.269ENSLACG00000012712ZRANB19894.269Latimeria_chalumnae
ENSRNOG00000017294Zranb19591.857ENSLOCG00000007990zranb1b9791.857Lepisosteus_oculatus
ENSRNOG00000017294Zranb19698.305ENSLAFG00000015221ZRANB110098.305Loxodonta_africana
ENSRNOG00000017294Zranb110098.774ENSMFAG00000031080ZRANB110098.774Macaca_fascicularis
ENSRNOG00000017294Zranb19499.277ENSMMUG00000022028ZRANB19999.277Macaca_mulatta
ENSRNOG00000017294Zranb110098.774ENSMNEG00000030081ZRANB110098.774Macaca_nemestrina
ENSRNOG00000017294Zranb110098.638ENSMLEG00000039002ZRANB110098.638Mandrillus_leucophaeus
ENSRNOG00000017294Zranb19585.097ENSMAMG00000017186zranb1b9885.097Mastacembelus_armatus
ENSRNOG00000017294Zranb19583.754ENSMZEG00005027460ZRANB19883.848Maylandia_zebra
ENSRNOG00000017294Zranb19585.795ENSMZEG00005001639zranb1a9985.755Maylandia_zebra
ENSRNOG00000017294Zranb19592.275ENSMAUG00000004316Zranb19892.253Mesocricetus_auratus
ENSRNOG00000017294Zranb110098.910ENSMICG00000000273ZRANB110099.294Microcebus_murinus
ENSRNOG00000017294Zranb19699.011ENSMOCG00000013623Zranb110099.011Microtus_ochrogaster
ENSRNOG00000017294Zranb19585.816ENSMMOG00000013723zranb1a9985.775Mola_mola
ENSRNOG00000017294Zranb19582.044ENSMMOG00000008203zranb1b9982.069Mola_mola
ENSRNOG00000017294Zranb19796.770ENSMODG00000010224ZRANB19596.761Monodelphis_domestica
ENSRNOG00000017294Zranb19583.449ENSMALG00000018259zranb1b9883.403Monopterus_albus
ENSRNOG00000017294Zranb1100100.000MGP_CAROLIEiJ_G0030583Zranb1100100.000Mus_caroli
ENSRNOG00000017294Zranb1100100.000ENSMUSG00000030967Zranb1100100.000Mus_musculus
ENSRNOG00000017294Zranb19699.576MGP_PahariEiJ_G0013790Zranb110099.576Mus_pahari
ENSRNOG00000017294Zranb1100100.000MGP_SPRETEiJ_G0031697Zranb1100100.000Mus_spretus
ENSRNOG00000017294Zranb19898.889ENSMPUG00000002701ZRANB19898.889Mustela_putorius_furo
ENSRNOG00000017294Zranb19697.881ENSMLUG00000000711ZRANB110097.881Myotis_lucifugus
ENSRNOG00000017294Zranb19698.446ENSNGAG00000023760Zranb110098.446Nannospalax_galili
ENSRNOG00000017294Zranb18782.801ENSNBRG00000016218ZRANB19683.131Neolamprologus_brichardi
ENSRNOG00000017294Zranb19585.938ENSNBRG00000013030zranb1a9685.897Neolamprologus_brichardi
ENSRNOG00000017294Zranb110098.501ENSNLEG00000000584ZRANB110099.011Nomascus_leucogenys
ENSRNOG00000017294Zranb19696.751ENSMEUG00000004252ZRANB110096.751Notamacropus_eugenii
ENSRNOG00000017294Zranb19690.395ENSOPRG00000015594-10090.395Ochotona_princeps
ENSRNOG00000017294Zranb19698.870ENSODEG00000017463ZRANB110098.870Octodon_degus
ENSRNOG00000017294Zranb19584.034ENSONIG00000000515ZRANB19884.174Oreochromis_niloticus
ENSRNOG00000017294Zranb19585.938ENSONIG00000016016zranb1a9785.897Oreochromis_niloticus
ENSRNOG00000017294Zranb19794.685ENSOCUG00000007071ZRANB19394.670Oryctolagus_cuniculus
ENSRNOG00000017294Zranb19581.880ENSORLG00000005663zranb1b9982.153Oryzias_latipes
ENSRNOG00000017294Zranb19684.143ENSORLG00000009697zranb1a9884.143Oryzias_latipes
ENSRNOG00000017294Zranb19582.016ENSORLG00020009424zranb1b9982.289Oryzias_latipes_hni
ENSRNOG00000017294Zranb19684.143ENSORLG00020005936ZRANB19884.143Oryzias_latipes_hni
ENSRNOG00000017294Zranb19684.000ENSORLG00015005231ZRANB19984.000Oryzias_latipes_hsok
ENSRNOG00000017294Zranb19582.016ENSORLG00015014410zranb1b9982.289Oryzias_latipes_hsok
ENSRNOG00000017294Zranb19683.857ENSOMEG00000010975zranb1a9983.857Oryzias_melastigma
ENSRNOG00000017294Zranb19582.153ENSOMEG00000000652ZRANB19982.153Oryzias_melastigma
ENSRNOG00000017294Zranb19699.013ENSOGAG00000008345ZRANB110099.013Otolemur_garnettii
ENSRNOG00000017294Zranb110098.776ENSOARG00000010740ZRANB110098.776Ovis_aries
ENSRNOG00000017294Zranb110098.638ENSPPAG00000036455ZRANB110098.638Pan_paniscus
ENSRNOG00000017294Zranb19698.446ENSPPRG00000017274ZRANB110098.446Panthera_pardus
ENSRNOG00000017294Zranb19397.953ENSPTIG00000018595ZRANB19797.953Panthera_tigris_altaica
ENSRNOG00000017294Zranb110098.638ENSPTRG00000003034ZRANB110098.638Pan_troglodytes
ENSRNOG00000017294Zranb110098.774ENSPANG00000020320ZRANB110098.774Papio_anubis
ENSRNOG00000017294Zranb19586.846ENSPKIG00000003627ZRANB19486.809Paramormyrops_kingsleyae
ENSRNOG00000017294Zranb19584.174ENSPMGG00000014814zranb1b9884.454Periophthalmus_magnuspinnatus
ENSRNOG00000017294Zranb19671.994ENSPMGG00000004770-9972.597Periophthalmus_magnuspinnatus
ENSRNOG00000017294Zranb19698.315ENSPEMG00000021601-10098.315Peromyscus_maniculatus_bairdii
ENSRNOG00000017294Zranb19697.034ENSPCIG00000023095ZRANB110097.034Phascolarctos_cinereus
ENSRNOG00000017294Zranb19580.868ENSPFOG00000017835zranb1b9982.090Poecilia_formosa
ENSRNOG00000017294Zranb19678.099ENSPLAG00000014945zranb1b9979.450Poecilia_latipinna
ENSRNOG00000017294Zranb19582.280ENSPMEG00000011255zranb1b9983.516Poecilia_mexicana
ENSRNOG00000017294Zranb19583.219ENSPREG00000011524zranb1b9983.219Poecilia_reticulata
ENSRNOG00000017294Zranb110098.638ENSPPYG00000002745ZRANB110098.638Pongo_abelii
ENSRNOG00000017294Zranb18795.597ENSPCAG00000006314ZRANB110095.597Procavia_capensis
ENSRNOG00000017294Zranb19896.149ENSPCOG00000020131ZRANB110096.149Propithecus_coquereli
ENSRNOG00000017294Zranb18798.428ENSPVAG00000017928ZRANB110098.428Pteropus_vampyrus
ENSRNOG00000017294Zranb19585.795ENSPNYG00000001475zranb1a9985.755Pundamilia_nyererei
ENSRNOG00000017294Zranb19583.333ENSPNYG00000004021ZRANB19883.427Pundamilia_nyererei
ENSRNOG00000017294Zranb19578.571ENSPNAG00000008717zranb1b9878.652Pygocentrus_nattereri
ENSRNOG00000017294Zranb19584.943ENSPNAG00000014798-9884.900Pygocentrus_nattereri
ENSRNOG00000017294Zranb110094.830ENSRBIG00000012257ZRANB110094.830Rhinopithecus_bieti
ENSRNOG00000017294Zranb110098.501ENSRROG00000039732ZRANB110098.501Rhinopithecus_roxellana
ENSRNOG00000017294Zranb110098.774ENSSBOG00000034635ZRANB110098.774Saimiri_boliviensis_boliviensis
ENSRNOG00000017294Zranb19697.034ENSSHAG00000005534ZRANB110097.034Sarcophilus_harrisii
ENSRNOG00000017294Zranb19588.604ENSSFOG00015008836zranb19889.031Scleropages_formosus
ENSRNOG00000017294Zranb19580.563ENSSFOG00015009991ZRANB19180.508Scleropages_formosus
ENSRNOG00000017294Zranb19584.637ENSSMAG00000002965zranb1a9984.593Scophthalmus_maximus
ENSRNOG00000017294Zranb19583.288ENSSDUG00000016090ZRANB19983.562Seriola_dumerili
ENSRNOG00000017294Zranb19686.338ENSSDUG00000018599zranb1a9986.506Seriola_dumerili
ENSRNOG00000017294Zranb19582.721ENSSLDG00000016768ZRANB19982.993Seriola_lalandi_dorsalis
ENSRNOG00000017294Zranb19785.396ENSSLDG00000024682zranb1a9885.356Seriola_lalandi_dorsalis
ENSRNOG00000017294Zranb19697.175ENSSPUG00000012970ZRANB110097.175Sphenodon_punctatus
ENSRNOG00000017294Zranb19585.097ENSSPAG00000011464ZRANB19885.097Stegastes_partitus
ENSRNOG00000017294Zranb19686.222ENSSPAG00000015578zranb1a9986.182Stegastes_partitus
ENSRNOG00000017294Zranb110098.910ENSSSCG00000010738ZRANB110099.153Sus_scrofa
ENSRNOG00000017294Zranb19796.897ENSTGUG00000011458ZRANB19996.897Taeniopygia_guttata
ENSRNOG00000017294Zranb19582.329ENSTRUG00000001497zranb1b9982.853Takifugu_rubripes
ENSRNOG00000017294Zranb19585.269ENSTRUG00000009736ZRANB19985.227Takifugu_rubripes
ENSRNOG00000017294Zranb19699.011ENSTTRG00000012645ZRANB110099.011Tursiops_truncatus
ENSRNOG00000017294Zranb19698.870ENSUAMG00000015841ZRANB110098.870Ursus_americanus
ENSRNOG00000017294Zranb110095.232ENSUMAG00000005395ZRANB110095.232Ursus_maritimus
ENSRNOG00000017294Zranb18791.038ENSVPAG00000010654ZRANB110091.038Vicugna_pacos
ENSRNOG00000017294Zranb110098.501ENSVVUG00000005988ZRANB110098.501Vulpes_vulpes
ENSRNOG00000017294Zranb19590.244ENSXETG00000023629zranb19890.244Xenopus_tropicalis
ENSRNOG00000017294Zranb19581.233ENSXCOG00000009868zranb1b9982.466Xiphophorus_couchianus
ENSRNOG00000017294Zranb19584.218ENSXMAG00000012557zranb1b9884.218Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0004843thiol-dependent ubiquitin-specific protease activity21873635.IBAFunction
GO:0004843thiol-dependent ubiquitin-specific protease activity-ISOFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm-IEAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005829cytosol-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0007010cytoskeleton organization21873635.IBAProcess
GO:0007010cytoskeleton organization-ISOProcess
GO:0016477cell migration21873635.IBAProcess
GO:0016477cell migration-ISOProcess
GO:0022604regulation of cell morphogenesis-IEAProcess
GO:0022604regulation of cell morphogenesis-ISOProcess
GO:0030177positive regulation of Wnt signaling pathway21873635.IBAProcess
GO:0030177positive regulation of Wnt signaling pathway-ISOProcess
GO:0035523protein K29-linked deubiquitination21873635.IBAProcess
GO:0035523protein K29-linked deubiquitination-ISOProcess
GO:0036459thiol-dependent ubiquitinyl hydrolase activity-ISOFunction
GO:0043231intracellular membrane-bounded organelle-ISOComponent
GO:0046872metal ion binding-IEAFunction
GO:0070530K63-linked polyubiquitin modification-dependent protein binding21873635.IBAFunction
GO:0070530K63-linked polyubiquitin modification-dependent protein binding-ISOFunction
GO:0070536protein K63-linked deubiquitination-IEAProcess
GO:0070536protein K63-linked deubiquitination-ISOProcess
GO:0071947protein deubiquitination involved in ubiquitin-dependent protein catabolic process21873635.IBAProcess
GO:0071947protein deubiquitination involved in ubiquitin-dependent protein catabolic process-ISOProcess
GO:1990168protein K33-linked deubiquitination21873635.IBAProcess
GO:1990168protein K33-linked deubiquitination-ISOProcess

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