EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000017460 (Gene tree)
Gene ID: 315697
Gene Symbol: Imp3
Alias: LOC315697|RGD1306825
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 1443 bases
Position: chr8:61607015-61608457
Accession: 1306825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000023456	S4	PF01479.25	9.7e-09	1	1
ENSRNOP00000023456	Ribosomal_S4	PF00163.19	2.9e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000023456	-	1443	-	ENSRNOP00000023456	184 (aa)	-	B2RZ12

Gene Model

Click here to download ENSRNOG00000017460's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000017460	Imp3	66	32.520	ENSRNOG00000058909	Rps9l1	81	30.909
ENSRNOG00000017460	Imp3	66	30.081	ENSRNOG00000050067	AABR07026058.1	63	30.081
ENSRNOG00000017460	Imp3	66	33.871	ENSRNOG00000039203	AABR07040892.1	63	33.871

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000017460	Imp3	100	67.391	ENSAPOG00000014720	imp3	100	67.391	Acanthochromis_polyacanthus
ENSRNOG00000017460	Imp3	100	95.652	ENSAMEG00000019247	IMP3	100	95.652	Ailuropoda_melanoleuca
ENSRNOG00000017460	Imp3	98	66.667	ENSACIG00000022070	imp3	96	66.667	Amphilophus_citrinellus
ENSRNOG00000017460	Imp3	100	68.478	ENSAOCG00000015761	imp3	100	68.478	Amphiprion_ocellaris
ENSRNOG00000017460	Imp3	99	68.132	ENSAPEG00000005250	imp3	99	68.132	Amphiprion_percula
ENSRNOG00000017460	Imp3	100	67.935	ENSATEG00000020021	imp3	100	67.935	Anabas_testudineus
ENSRNOG00000017460	Imp3	99	74.054	ENSACAG00000016259	IMP3	99	74.054	Anolis_carolinensis
ENSRNOG00000017460	Imp3	100	96.196	ENSANAG00000016669	-	100	96.196	Aotus_nancymaae
ENSRNOG00000017460	Imp3	100	81.522	ENSANAG00000036874	-	100	81.522	Aotus_nancymaae
ENSRNOG00000017460	Imp3	100	69.565	ENSACLG00000009929	imp3	100	69.565	Astatotilapia_calliptera
ENSRNOG00000017460	Imp3	96	69.318	ENSAMXG00000018715	imp3	99	69.318	Astyanax_mexicanus
ENSRNOG00000017460	Imp3	99	50.549	WBGene00016740	C48B6.2	99	50.549	Caenorhabditis_elegans
ENSRNOG00000017460	Imp3	100	96.196	ENSCJAG00000044585	IMP3	100	96.196	Callithrix_jacchus
ENSRNOG00000017460	Imp3	100	94.565	ENSCAFG00000018039	IMP3	82	94.565	Canis_familiaris
ENSRNOG00000017460	Imp3	100	94.565	ENSCAFG00020003760	-	100	94.565	Canis_lupus_dingo
ENSRNOG00000017460	Imp3	100	73.370	ENSCAFG00020006737	-	100	71.728	Canis_lupus_dingo
ENSRNOG00000017460	Imp3	100	96.739	ENSCHIG00000006295	IMP3	100	96.739	Capra_hircus
ENSRNOG00000017460	Imp3	100	97.283	ENSTSYG00000005503	IMP3	100	97.283	Carlito_syrichta
ENSRNOG00000017460	Imp3	100	96.196	ENSCPOG00000012016	IMP3	100	96.196	Cavia_porcellus
ENSRNOG00000017460	Imp3	100	96.196	ENSCCAG00000002712	-	100	96.196	Cebus_capucinus
ENSRNOG00000017460	Imp3	98	82.873	ENSCCAG00000023378	-	99	82.286	Cebus_capucinus
ENSRNOG00000017460	Imp3	100	96.196	ENSCATG00000015188	IMP3	100	96.196	Cercocebus_atys
ENSRNOG00000017460	Imp3	100	96.196	ENSCSAG00000019732	IMP3	100	96.196	Chlorocebus_sabaeus
ENSRNOG00000017460	Imp3	100	96.196	ENSCHOG00000012046	IMP3	100	96.196	Choloepus_hoffmanni
ENSRNOG00000017460	Imp3	99	74.863	ENSCPBG00000021662	IMP3	99	74.863	Chrysemys_picta_bellii
ENSRNOG00000017460	Imp3	98	59.116	ENSCING00000004233	-	99	59.116	Ciona_intestinalis
ENSRNOG00000017460	Imp3	98	61.878	ENSCSAVG00000000698	-	99	61.878	Ciona_savignyi
ENSRNOG00000017460	Imp3	100	96.196	ENSCANG00000018342	IMP3	100	96.196	Colobus_angolensis_palliatus
ENSRNOG00000017460	Imp3	100	100.000	ENSCGRG00001001326	Imp3	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000017460	Imp3	100	100.000	ENSCGRG00000018907	Imp3	100	100.000	Cricetulus_griseus_crigri
ENSRNOG00000017460	Imp3	99	67.582	ENSCSEG00000017200	imp3	99	67.582	Cynoglossus_semilaevis
ENSRNOG00000017460	Imp3	100	61.780	ENSCVAG00000019511	imp3	100	61.780	Cyprinodon_variegatus
ENSRNOG00000017460	Imp3	100	68.478	ENSDARG00000115266	imp3	100	68.478	Danio_rerio
ENSRNOG00000017460	Imp3	100	95.109	ENSDNOG00000015787	IMP3	81	95.109	Dasypus_novemcinctus
ENSRNOG00000017460	Imp3	100	95.109	ENSDORG00000029301	Imp3	100	95.109	Dipodomys_ordii
ENSRNOG00000017460	Imp3	99	57.692	FBgn0034232	CG4866	100	57.692	Drosophila_melanogaster
ENSRNOG00000017460	Imp3	100	92.935	ENSETEG00000004278	IMP3	100	92.935	Echinops_telfairi
ENSRNOG00000017460	Imp3	99	67.033	ENSEBUG00000002343	imp3	99	67.033	Eptatretus_burgeri
ENSRNOG00000017460	Imp3	100	96.196	ENSEASG00005015693	IMP3	100	96.196	Equus_asinus_asinus
ENSRNOG00000017460	Imp3	100	96.739	ENSECAG00000015786	IMP3	100	96.739	Equus_caballus
ENSRNOG00000017460	Imp3	99	67.582	ENSELUG00000023264	imp3	99	67.582	Esox_lucius
ENSRNOG00000017460	Imp3	100	96.739	ENSFCAG00000040328	IMP3	100	96.739	Felis_catus
ENSRNOG00000017460	Imp3	71	68.182	ENSFALG00000014811	IMP3	100	68.182	Ficedula_albicollis
ENSRNOG00000017460	Imp3	100	96.739	ENSFDAG00000018422	IMP3	100	96.739	Fukomys_damarensis
ENSRNOG00000017460	Imp3	100	68.478	ENSFHEG00000016954	imp3	100	68.478	Fundulus_heteroclitus
ENSRNOG00000017460	Imp3	99	65.934	ENSGMOG00000018162	imp3	99	65.934	Gadus_morhua
ENSRNOG00000017460	Imp3	100	66.486	ENSGALG00000040238	IMP3	100	66.486	Gallus_gallus
ENSRNOG00000017460	Imp3	100	67.935	ENSGAFG00000007425	imp3	100	67.935	Gambusia_affinis
ENSRNOG00000017460	Imp3	99	67.582	ENSGACG00000015998	imp3	99	67.582	Gasterosteus_aculeatus
ENSRNOG00000017460	Imp3	99	74.863	ENSGAGG00000008163	IMP3	99	74.863	Gopherus_agassizii
ENSRNOG00000017460	Imp3	100	96.196	ENSGGOG00000025122	IMP3	100	96.196	Gorilla_gorilla
ENSRNOG00000017460	Imp3	100	69.565	ENSHBUG00000018453	imp3	100	69.565	Haplochromis_burtoni
ENSRNOG00000017460	Imp3	100	96.739	ENSHGLG00000019824	IMP3	100	96.739	Heterocephalus_glaber_female
ENSRNOG00000017460	Imp3	100	96.739	ENSHGLG00100020660	IMP3	100	96.739	Heterocephalus_glaber_male
ENSRNOG00000017460	Imp3	100	66.304	ENSHCOG00000020565	imp3	100	66.304	Hippocampus_comes
ENSRNOG00000017460	Imp3	99	69.780	ENSIPUG00000013142	imp3	99	69.780	Ictalurus_punctatus
ENSRNOG00000017460	Imp3	100	96.739	ENSSTOG00000030143	IMP3	100	96.739	Ictidomys_tridecemlineatus
ENSRNOG00000017460	Imp3	100	67.391	ENSKMAG00000001956	imp3	100	67.391	Kryptolebias_marmoratus
ENSRNOG00000017460	Imp3	99	67.033	ENSLBEG00000008178	imp3	99	67.033	Labrus_bergylta
ENSRNOG00000017460	Imp3	100	74.457	ENSLACG00000022148	imp3	100	74.457	Latimeria_chalumnae
ENSRNOG00000017460	Imp3	99	69.780	ENSLOCG00000010237	imp3	99	69.780	Lepisosteus_oculatus
ENSRNOG00000017460	Imp3	100	94.565	ENSLAFG00000004425	IMP3	100	94.565	Loxodonta_africana
ENSRNOG00000017460	Imp3	100	96.196	ENSMFAG00000008867	IMP3	100	96.196	Macaca_fascicularis
ENSRNOG00000017460	Imp3	100	96.196	ENSMMUG00000016103	IMP3	100	96.196	Macaca_mulatta
ENSRNOG00000017460	Imp3	100	96.196	ENSMNEG00000026328	IMP3	100	96.196	Macaca_nemestrina
ENSRNOG00000017460	Imp3	100	68.478	ENSMAMG00000003215	imp3	100	68.478	Mastacembelus_armatus
ENSRNOG00000017460	Imp3	100	69.565	ENSMZEG00005005544	imp3	100	69.565	Maylandia_zebra
ENSRNOG00000017460	Imp3	100	98.913	ENSMAUG00000010279	Imp3	100	98.913	Mesocricetus_auratus
ENSRNOG00000017460	Imp3	100	95.652	ENSMICG00000044149	IMP3	100	95.652	Microcebus_murinus
ENSRNOG00000017460	Imp3	100	98.913	ENSMOCG00000008647	Imp3	100	98.913	Microtus_ochrogaster
ENSRNOG00000017460	Imp3	96	68.750	ENSMMOG00000018117	imp3	84	68.750	Mola_mola
ENSRNOG00000017460	Imp3	100	84.783	ENSMODG00000025193	IMP3	100	84.783	Monodelphis_domestica
ENSRNOG00000017460	Imp3	99	69.231	ENSMALG00000006505	imp3	99	69.231	Monopterus_albus
ENSRNOG00000017460	Imp3	100	99.457	MGP_CAROLIEiJ_G0032258	Imp3	100	99.457	Mus_caroli
ENSRNOG00000017460	Imp3	100	98.913	ENSMUSG00000032288	Imp3	100	98.913	Mus_musculus
ENSRNOG00000017460	Imp3	100	99.457	MGP_PahariEiJ_G0015125	Imp3	100	99.457	Mus_pahari
ENSRNOG00000017460	Imp3	100	98.913	MGP_SPRETEiJ_G0033398	Imp3	100	98.913	Mus_spretus
ENSRNOG00000017460	Imp3	100	95.652	ENSMPUG00000020147	IMP3	100	95.652	Mustela_putorius_furo
ENSRNOG00000017460	Imp3	100	95.652	ENSMLUG00000014032	IMP3	100	95.652	Myotis_lucifugus
ENSRNOG00000017460	Imp3	100	96.739	ENSNGAG00000017248	Imp3	100	96.739	Nannospalax_galili
ENSRNOG00000017460	Imp3	100	69.565	ENSNBRG00000004060	imp3	100	69.565	Neolamprologus_brichardi
ENSRNOG00000017460	Imp3	100	96.739	ENSOPRG00000015906	-	100	96.739	Ochotona_princeps
ENSRNOG00000017460	Imp3	100	96.196	ENSODEG00000020194	IMP3	100	96.196	Octodon_degus
ENSRNOG00000017460	Imp3	100	69.022	ENSONIG00000010661	imp3	100	69.022	Oreochromis_niloticus
ENSRNOG00000017460	Imp3	100	97.283	ENSOCUG00000004690	IMP3	100	97.283	Oryctolagus_cuniculus
ENSRNOG00000017460	Imp3	100	68.478	ENSORLG00000004484	imp3	100	68.478	Oryzias_latipes
ENSRNOG00000017460	Imp3	100	68.478	ENSORLG00020003771	imp3	100	68.478	Oryzias_latipes_hni
ENSRNOG00000017460	Imp3	100	67.935	ENSORLG00015006933	imp3	100	67.935	Oryzias_latipes_hsok
ENSRNOG00000017460	Imp3	100	68.478	ENSOMEG00000016160	imp3	100	68.478	Oryzias_melastigma
ENSRNOG00000017460	Imp3	100	95.652	ENSOGAG00000004917	IMP3	100	95.652	Otolemur_garnettii
ENSRNOG00000017460	Imp3	100	96.196	ENSPPAG00000009241	IMP3	100	96.196	Pan_paniscus
ENSRNOG00000017460	Imp3	100	96.739	ENSPPRG00000018701	IMP3	100	96.739	Panthera_pardus
ENSRNOG00000017460	Imp3	100	96.196	ENSPTRG00000052235	IMP3	100	96.196	Pan_troglodytes
ENSRNOG00000017460	Imp3	100	96.196	ENSPANG00000013668	IMP3	100	96.196	Papio_anubis
ENSRNOG00000017460	Imp3	99	69.780	ENSPKIG00000007169	imp3	99	69.780	Paramormyrops_kingsleyae
ENSRNOG00000017460	Imp3	100	60.000	ENSPMGG00000009379	imp3	100	60.000	Periophthalmus_magnuspinnatus
ENSRNOG00000017460	Imp3	100	99.457	ENSPEMG00000013003	Imp3	100	99.457	Peromyscus_maniculatus_bairdii
ENSRNOG00000017460	Imp3	100	68.478	ENSPFOG00000016529	imp3	100	68.478	Poecilia_formosa
ENSRNOG00000017460	Imp3	100	68.478	ENSPLAG00000013831	imp3	100	68.478	Poecilia_latipinna
ENSRNOG00000017460	Imp3	99	68.681	ENSPMEG00000000797	imp3	99	68.681	Poecilia_mexicana
ENSRNOG00000017460	Imp3	100	67.935	ENSPREG00000006885	imp3	100	67.935	Poecilia_reticulata
ENSRNOG00000017460	Imp3	100	95.652	ENSPPYG00000006664	IMP3	100	95.652	Pongo_abelii
ENSRNOG00000017460	Imp3	100	94.565	ENSPCAG00000006920	IMP3	100	94.565	Procavia_capensis
ENSRNOG00000017460	Imp3	100	96.196	ENSPCOG00000012367	IMP3	100	96.196	Propithecus_coquereli
ENSRNOG00000017460	Imp3	100	95.652	ENSPVAG00000010036	IMP3	100	95.652	Pteropus_vampyrus
ENSRNOG00000017460	Imp3	100	69.565	ENSPNYG00000000324	imp3	100	69.565	Pundamilia_nyererei
ENSRNOG00000017460	Imp3	99	69.231	ENSPNAG00000017113	imp3	99	69.231	Pygocentrus_nattereri
ENSRNOG00000017460	Imp3	100	95.652	ENSRBIG00000024522	IMP3	100	95.652	Rhinopithecus_bieti
ENSRNOG00000017460	Imp3	100	95.652	ENSRROG00000024157	IMP3	100	95.652	Rhinopithecus_roxellana
ENSRNOG00000017460	Imp3	99	53.005	YHR148W	-	99	53.005	Saccharomyces_cerevisiae
ENSRNOG00000017460	Imp3	100	82.609	ENSSBOG00000026404	-	100	82.609	Saimiri_boliviensis_boliviensis
ENSRNOG00000017460	Imp3	100	96.196	ENSSBOG00000006542	-	100	96.196	Saimiri_boliviensis_boliviensis
ENSRNOG00000017460	Imp3	99	84.699	ENSSHAG00000006200	IMP3	99	84.699	Sarcophilus_harrisii
ENSRNOG00000017460	Imp3	99	70.330	ENSSFOG00015012483	imp3	99	70.330	Scleropages_formosus
ENSRNOG00000017460	Imp3	100	67.935	ENSSMAG00000007865	imp3	100	67.935	Scophthalmus_maximus
ENSRNOG00000017460	Imp3	100	68.478	ENSSDUG00000010594	imp3	100	68.478	Seriola_dumerili
ENSRNOG00000017460	Imp3	100	67.391	ENSSLDG00000015587	imp3	100	67.391	Seriola_lalandi_dorsalis
ENSRNOG00000017460	Imp3	100	96.739	ENSSARG00000009657	IMP3	100	96.739	Sorex_araneus
ENSRNOG00000017460	Imp3	100	68.478	ENSSPAG00000002088	imp3	100	68.478	Stegastes_partitus
ENSRNOG00000017460	Imp3	100	65.405	ENSTGUG00000013228	IMP3	100	65.405	Taeniopygia_guttata
ENSRNOG00000017460	Imp3	99	68.681	ENSTRUG00000025783	imp3	99	68.681	Takifugu_rubripes
ENSRNOG00000017460	Imp3	100	96.196	ENSUAMG00000022724	IMP3	100	96.196	Ursus_americanus
ENSRNOG00000017460	Imp3	100	96.196	ENSUMAG00000003736	IMP3	100	96.196	Ursus_maritimus
ENSRNOG00000017460	Imp3	100	94.022	ENSVVUG00000019589	IMP3	100	94.022	Vulpes_vulpes
ENSRNOG00000017460	Imp3	96	66.477	ENSXCOG00000007392	imp3	96	66.477	Xiphophorus_couchianus
ENSRNOG00000017460	Imp3	100	67.935	ENSXMAG00000023049	imp3	100	67.935	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0006364	rRNA processing	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0019843	rRNA binding	-	IEA	Function
GO:0030515	snoRNA binding	21873635.	IBA	Function
GO:0030684	preribosome	-	ISO	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034457	Mpp10 complex	21873635.	IBA	Component
GO:0034457	Mpp10 complex	-	ISO	Component