EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000017804 (Gene tree)
Gene ID: 293507
Gene Symbol: Sept1
Alias: LOC293507|MGC109124
Full Name: septin 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 3866 bases
Position: chr1:198658745-198662610
Accession: 1307216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000051893	MMR_HSR1	PF01926.23	2e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000055012	-	1417	XM_017588994	ENSRNOP00000051893	366 (aa)	XP_017444483	Q5EB96

Gene Model

Click here to download ENSRNOG00000017804's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000017804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000017804	Sept1	80	40.541	ENSRNOG00000002807	Sept9	52	40.678
ENSRNOG00000017804	Sept1	95	60.983	ENSRNOG00000029912	Sept5	93	62.500
ENSRNOG00000017804	Sept1	93	38.462	ENSRNOG00000038495	Sept14	86	38.187
ENSRNOG00000017804	Sept1	94	54.360	ENSRNOG00000017952	Sept2	89	54.360
ENSRNOG00000017804	Sept1	90	51.818	ENSRNOG00000006545	Sept7	76	50.291
ENSRNOG00000017804	Sept1	78	44.755	ENSRNOG00000003137	Sept12	79	44.755
ENSRNOG00000017804	Sept1	92	40.176	ENSRNOG00000002182	Sept11	76	40.762
ENSRNOG00000017804	Sept1	79	43.103	ENSRNOG00000049507	Sept10	66	42.373
ENSRNOG00000017804	Sept1	79	42.069	ENSRNOG00000007462	Sept8	65	42.069
ENSRNOG00000017804	Sept1	97	63.788	ENSRNOG00000007367	Sept4	96	65.789
ENSRNOG00000017804	Sept1	79	46.233	ENSRNOG00000007686	Sept3	81	46.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000017804	Sept1	100	94.823	ENSG00000180096	SEPT1	87	98.361	Homo_sapiens
ENSRNOG00000017804	Sept1	99	92.371	ENSAMEG00000007865	SEPT1	99	92.371	Ailuropoda_melanoleuca
ENSRNOG00000017804	Sept1	100	94.550	ENSANAG00000029084	SEPT1	100	94.550	Aotus_nancymaae
ENSRNOG00000017804	Sept1	100	94.550	ENSBTAG00000021219	SEPT1	100	94.550	Bos_taurus
ENSRNOG00000017804	Sept1	100	93.188	ENSCJAG00000002577	SEPT1	89	93.188	Callithrix_jacchus
ENSRNOG00000017804	Sept1	99	93.989	ENSCAFG00000016576	SEPT1	99	93.989	Canis_familiaris
ENSRNOG00000017804	Sept1	99	93.989	ENSCAFG00020017813	SEPT1	99	93.989	Canis_lupus_dingo
ENSRNOG00000017804	Sept1	100	91.733	ENSCHIG00000017447	SEPT1	100	91.733	Capra_hircus
ENSRNOG00000017804	Sept1	100	92.916	ENSTSYG00000035596	SEPT1	100	92.916	Carlito_syrichta
ENSRNOG00000017804	Sept1	99	73.770	ENSCAPG00000001347	SEPT1	99	73.770	Cavia_aperea
ENSRNOG00000017804	Sept1	99	91.781	ENSCPOG00000003088	SEPT1	99	91.781	Cavia_porcellus
ENSRNOG00000017804	Sept1	100	82.016	ENSCCAG00000030164	SEPT1	90	82.016	Cebus_capucinus
ENSRNOG00000017804	Sept1	100	94.823	ENSCATG00000037250	SEPT1	99	94.823	Cercocebus_atys
ENSRNOG00000017804	Sept1	99	93.460	ENSCLAG00000010486	SEPT1	100	93.529	Chinchilla_lanigera
ENSRNOG00000017804	Sept1	100	94.823	ENSCSAG00000006056	SEPT1	99	94.823	Chlorocebus_sabaeus
ENSRNOG00000017804	Sept1	100	94.550	ENSCANG00000035786	SEPT1	89	94.550	Colobus_angolensis_palliatus
ENSRNOG00000017804	Sept1	100	97.003	ENSCGRG00001003374	Sept1	100	97.003	Cricetulus_griseus_chok1gshd
ENSRNOG00000017804	Sept1	100	96.185	ENSCGRG00000004919	Sept1	100	96.185	Cricetulus_griseus_crigri
ENSRNOG00000017804	Sept1	100	93.188	ENSDNOG00000014680	SEPT1	85	93.188	Dasypus_novemcinctus
ENSRNOG00000017804	Sept1	100	95.368	ENSDORG00000011443	Sept1	100	95.368	Dipodomys_ordii
ENSRNOG00000017804	Sept1	92	93.805	ENSEASG00005013153	SEPT1	100	93.805	Equus_asinus_asinus
ENSRNOG00000017804	Sept1	100	94.278	ENSECAG00000009390	SEPT1	96	94.278	Equus_caballus
ENSRNOG00000017804	Sept1	100	92.643	ENSEEUG00000007661	SEPT1	100	92.643	Erinaceus_europaeus
ENSRNOG00000017804	Sept1	100	93.733	ENSFCAG00000013541	SEPT1	94	93.733	Felis_catus
ENSRNOG00000017804	Sept1	100	72.727	ENSGGOG00000017024	SEPT1	88	72.727	Gorilla_gorilla
ENSRNOG00000017804	Sept1	100	94.823	ENSSTOG00000002782	SEPT1	100	94.823	Ictidomys_tridecemlineatus
ENSRNOG00000017804	Sept1	100	94.550	ENSJJAG00000023131	Sept1	100	94.550	Jaculus_jaculus
ENSRNOG00000017804	Sept1	99	92.623	ENSLAFG00000027789	SEPT1	99	92.623	Loxodonta_africana
ENSRNOG00000017804	Sept1	100	94.823	ENSMFAG00000031504	SEPT1	89	94.823	Macaca_fascicularis
ENSRNOG00000017804	Sept1	100	88.283	ENSMMUG00000021842	SEPT1	97	94.690	Macaca_mulatta
ENSRNOG00000017804	Sept1	100	83.152	ENSMNEG00000041695	SEPT1	89	83.152	Macaca_nemestrina
ENSRNOG00000017804	Sept1	100	86.921	ENSMLEG00000039481	SEPT1	88	86.921	Mandrillus_leucophaeus
ENSRNOG00000017804	Sept1	100	97.548	ENSMAUG00000009531	Sept1	100	97.548	Mesocricetus_auratus
ENSRNOG00000017804	Sept1	99	94.536	ENSMICG00000011817	SEPT1	94	94.536	Microcebus_murinus
ENSRNOG00000017804	Sept1	100	97.275	ENSMOCG00000017518	Sept1	100	97.275	Microtus_ochrogaster
ENSRNOG00000017804	Sept1	100	97.541	MGP_CAROLIEiJ_G0030492	Sept1	100	98.621	Mus_caroli
ENSRNOG00000017804	Sept1	100	98.634	ENSMUSG00000000486	Sept1	100	99.310	Mus_musculus
ENSRNOG00000017804	Sept1	100	98.361	MGP_PahariEiJ_G0013702	Sept1	100	98.621	Mus_pahari
ENSRNOG00000017804	Sept1	100	98.361	MGP_SPRETEiJ_G0031606	Sept1	100	98.621	Mus_spretus
ENSRNOG00000017804	Sept1	99	93.169	ENSMLUG00000006749	SEPT1	99	93.169	Myotis_lucifugus
ENSRNOG00000017804	Sept1	100	95.913	ENSNGAG00000021368	Sept1	100	95.913	Nannospalax_galili
ENSRNOG00000017804	Sept1	99	89.344	ENSMEUG00000000492	SEPT1	100	87.978	Notamacropus_eugenii
ENSRNOG00000017804	Sept1	100	91.008	ENSOPRG00000007981	SEPT1	100	91.008	Ochotona_princeps
ENSRNOG00000017804	Sept1	100	92.120	ENSODEG00000014531	SEPT1	100	92.120	Octodon_degus
ENSRNOG00000017804	Sept1	100	86.649	ENSOANG00000005331	SEPT1	100	85.559	Ornithorhynchus_anatinus
ENSRNOG00000017804	Sept1	99	95.355	ENSOGAG00000013350	SEPT1	99	95.355	Otolemur_garnettii
ENSRNOG00000017804	Sept1	99	93.750	ENSOARG00000006135	SEPT1	99	93.750	Ovis_aries
ENSRNOG00000017804	Sept1	100	75.749	ENSPPAG00000032680	SEPT1	87	75.749	Pan_paniscus
ENSRNOG00000017804	Sept1	99	93.716	ENSPPRG00000008648	-	100	93.716	Panthera_pardus
ENSRNOG00000017804	Sept1	84	93.182	ENSPTIG00000006718	SEPT1	87	93.182	Panthera_tigris_altaica
ENSRNOG00000017804	Sept1	100	94.823	ENSPTRG00000007998	SEPT1	89	94.823	Pan_troglodytes
ENSRNOG00000017804	Sept1	100	86.921	ENSPANG00000032364	SEPT1	99	86.921	Papio_anubis
ENSRNOG00000017804	Sept1	100	97.548	ENSPEMG00000023616	Sept1	100	97.548	Peromyscus_maniculatus_bairdii
ENSRNOG00000017804	Sept1	100	90.191	ENSPCIG00000001537	SEPT1	100	88.828	Phascolarctos_cinereus
ENSRNOG00000017804	Sept1	84	93.506	ENSPPYG00000007270	-	100	93.506	Pongo_abelii
ENSRNOG00000017804	Sept1	100	91.553	ENSPCAG00000009042	SEPT1	100	91.553	Procavia_capensis
ENSRNOG00000017804	Sept1	100	94.550	ENSPCOG00000028121	SEPT1	90	94.550	Propithecus_coquereli
ENSRNOG00000017804	Sept1	100	95.368	ENSPVAG00000008655	SEPT1	100	95.368	Pteropus_vampyrus
ENSRNOG00000017804	Sept1	100	94.278	ENSRBIG00000036580	SEPT1	89	94.278	Rhinopithecus_bieti
ENSRNOG00000017804	Sept1	100	94.278	ENSRROG00000038708	SEPT1	99	94.278	Rhinopithecus_roxellana
ENSRNOG00000017804	Sept1	100	94.005	ENSSBOG00000021733	SEPT1	89	94.005	Saimiri_boliviensis_boliviensis
ENSRNOG00000017804	Sept1	99	88.767	ENSSHAG00000006478	SEPT1	99	87.397	Sarcophilus_harrisii
ENSRNOG00000017804	Sept1	95	95.402	ENSSSCG00000007800	SEPT1	100	95.082	Sus_scrofa
ENSRNOG00000017804	Sept1	100	94.550	ENSTTRG00000017272	SEPT1	100	94.550	Tursiops_truncatus
ENSRNOG00000017804	Sept1	100	94.550	ENSUAMG00000027438	SEPT1	99	94.278	Ursus_americanus
ENSRNOG00000017804	Sept1	100	94.550	ENSUMAG00000011345	SEPT1	100	94.550	Ursus_maritimus
ENSRNOG00000017804	Sept1	92	93.155	ENSVVUG00000026116	SEPT1	90	93.155	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005815	microtubule organizing center	-	IEA	Component
GO:0005940	septin ring	21873635.	IBA	Component
GO:0007056	spindle assembly involved in female meiosis	-	IEA	Process
GO:0007056	spindle assembly involved in female meiosis	-	ISO	Process
GO:0008021	synaptic vesicle	21873635.	IBA	Component
GO:0015630	microtubule cytoskeleton	21873635.	IBA	Component
GO:0017157	regulation of exocytosis	21873635.	IBA	Process
GO:0030496	midbody	-	IEA	Component
GO:0030496	midbody	-	ISO	Component
GO:0031105	septin complex	21873635.	IBA	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0051311	meiotic metaphase plate congression	-	IEA	Process
GO:0051311	meiotic metaphase plate congression	-	ISO	Process
GO:0060090	molecular adaptor activity	21873635.	IBA	Function
GO:0061640	cytoskeleton-dependent cytokinesis	21873635.	IBA	Process
GO:0072687	meiotic spindle	-	IEA	Component
GO:0072687	meiotic spindle	-	ISO	Component